Y Chromosome Variation in Northern Island Melanesia

Population Genetics, Linguistics, and Culture History in the Southwest Pacific

Volumn , Issue , 2007, Pages

  Scheinfeldt, Laura B ^a   Friedlaender, Françoise R ^b   Friedlaender, Jonathan S ^c   Latham, Krista ^c   Koki, George ^d   Karafet, Tatiana ^e   Hammer, Michael ^e   Lorenz, Joseph ^f  

^a CHILDREN S HOSPITAL OF PHILADELPHIA   (United States)

^b Temple University ^*  (United States)

^c TEMPLE UNIVERSITY   (United States)

^d PAPUA NEW GUINEA INSTITUTE OF MEDICAL RESEARCH   (Papua New Guinea)

^e UNIVERSITY OF ARIZONA   (United States)

^f NIGMS Human Mutant Cell Repository   (United States)

Author keywords

Genetic variation; Near oceania; Northern Island Melanesia

Indexed keywords

EID: 84920752702     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1093/acprof:oso/9780195300307.003.0005     Document Type: Chapter

References (31)

1. Bandelt HJ, Forster P, Rohl A. 1999. Median-joining networks for inferring intraspecific phylogenies. Molecular Biology and Evolution 16: 37-48.
2. Capelli C, Wilson JF, Richards M, Stumpf MP, Gratrix F, Oppenheimer S, Underhill P, Pascali VL, Ko TM, Goldstein DB. 2001. A predominantly indigenous paternal heritage for the Austronesian-speaking peoples of insular Southeast Asia and Oceania. American Journal of Human Genetics 68: 432-43.
3. Cox MP. 2003. Genetic patterning at Austronesian contact zones. In: Anthropology. Dunedin, New Zealand (doctoral dissertation): University of Otago. pp 270.
4. Cox MP, Mirazon Lahr M. 2006. Y-chromosome diversity is inversely associated with language affiliation in paired Austronesian- and Papuan speaking communities from the Solomon Islands. American Journal of Human Biology. 18:35-50.
5. Ellis N, Hammer M. 2002. Y chromosome consortium: A nomenclature system for the tree of human Y-chromosomal binary haplogroups. Genome Research 12: 339-48.
6. Excoffier L, Schneider S. 2005. Arlequin version 3.0: An integrated software package for Population Genetics Data Analysis. Evolutionary Bioinformatics Online. 1:47-50.
7. Forster P, Kayser M, Meyer E, Roewer L, Pfeiffer H, Benkmann H, Brinkmann B. 1998. Phylogenetic resolution of complex mutational features at YSTR DYS390 in aboriginal Australians and Papuans. Molecular Biology and Evolution. 15: 1108-14.
8. Friedlaender JS. 1975. Patterns of human variation: The demography, genetics, and phenetics of Bougainville Islanders. Cambridge, MA: Harvard University Press.
9. Friedlaender J, Schurr T, Gentz F, Koki G, Friedlaender F, Horvat G, Babb P, Cerchio S, Kaestle F, Schanfield M, Deka R, Yanagihara R, Merriwether DA. 2005. Expanding Southwest Pacific mitochondrial haplogroups P and Q. Molecular Biology and Evolution 22: 1506-17.
10. Friedlaender JS, Gentz F, Thompson F, Kaestle F, Schurr TG, Koki G, Mgone C, McDonough J, Smith L, Merriwether DA. 2006. Mitochondrial genetic diversity and its determinants in Island Melanesia. In: Pawley A, Attenborough R, Golson J, Hyde R, editors. Papuan pasts: Studies in the cultural, linguistic and biological history of the Papuan speaking peoples. Canberra, Australia: Pacific Linguistics. pp 693-716.
11. Groube L. 1986. Waisted axes of Asia, Melanesia, and Australia. In: Ward GK, editor. Archaeology at ANZAAS. Canberra, Australia: Canberra Archaeological Society. pp 168-77.
12. Hammer MF, Spurdle AB, Karafet T, Bonner MR, Wood ET, Novelletto A, Malaspina P, Mitchell RJ, Horai S, Jenkins T, Zegura SL. 1997. The geographic distribution of human Y chromosome variation. Genetics 145: 787-805.
13. Jobling MA, Tyler-Smith C. 2003. The human Y chromosome: An evolutionary marker comes of age. Nature Reviews Genetics 4: 598-612.
14. Karafet TM, Lansing JS, Redd AJ, Reznikova S, Watkins JC, Surata SP, Arthawiguna WA, Mayer L, Bamshad M, Jorde LB, Hammer MF. 2005. Balinese Y-chromosome perspective on the peopling of Indonesia: Genetic contributions from pre-neolithic hunter-gatherers, Austronesian farmers, and Indian traders. Human Biology 77: 93-114.
15. Kayser M, Brauer S, Weiss G, Underhill PA, Roewer L, Schiefenhovel W, Stoneking M. 2000. Melanesian origin of Polynesian Y chromosomes. Current Biology 10: 1237-46.
16. Kayser M, Brauer S, Weiss G, Schiefenhovel W, Underhill PA, Stoneking M. 2001a. Independent histories of (p.95) human Y chromosomes from Melanesia and Australia. American Journal of Human Genetics 68: 173-90.
17. Kayser M, Krawczak M, Excoffier L, Dieltjes P, Corach D, Pascali V, Gehrig C, Bernini LF, Jespersen J, Bakker E, Roewer L, de Knijff P. 2001b. An extensive analysis of Y-chromosomal microsatellite haplotypes in globally dispersed human populations. American Journal of Human Genetics 68: 990-1018.
18. Kayser M, Brauer S, Weiss G, Schiefenhovel W, Underhill P, Shen P, Oefner P, Tommaseo-Ponzetta M, Stoneking M. 2003. Reduced Y-chromosome, but not mitochondrial DNA, diversity in human populations from West New Guinea. American Journal of Human Genetics 72: 281-302.
19. Leavesley MG, Bird MI, Fifield LK, Hausladen PA, Santos GM, di Tada ML. 2002. Buang Merabak: Early evidence for human occupation in the Bismarck Archipelago, Papua New Guinea. Australian Archaeology 54: 55-7.
20. Merriwether DA, Friedlaender JS, Mediavilla J, Mgone C, Gentz F, Ferrell RE. 1999. Mitochondrial DNA variation is an indicator of Austronesian influence in Island Melanesia. American Journal of Physical Anthropology 110: 243-70.
21. Merriwether DA, Hodgson JA, Friedlaender FR, Allaby R, Cerchio S, Koki G, Friedlaender JS. 2005. Ancient mitochondrial M haplogroups identified in the Southwest Pacific. Proceedings of the National Academy of Sciences USA 102: 13034-9.
22. Reesink G. 2005. Sulka of East New Britain: A mixture of Oceanic and Papuan traits. Oceanic Linguistics 44: 145-93.
23. Scheinfeldt L, Friedlaender F, Friedlaender J, Latham K, Koki G, Karafet T, Hammer M, Lorenz J. 2006. Unexpected NRY chromosome variation in Northern Island Melanesia. Molecular Biology and Evolution. 23:1628-41.
24. Shi H, Dong YL, Wen B, Xiao CJ, Underhill PA, Shen PD, Chakraborty R, Jin L, Su B. 2005. Y-chromosome evidence of southern origin of the East Asianspecific haplogroup O3-M122. American Journal of Human Genetics 77:408-19.
25. Trejaut JA, Kivisild T, Loo JH, Lee CL, He CL, Hsu CJ, Li ZY, Lin M. 2005. Traces of archaic mitochondrial lineages persist in Austronesian-speaking formosan populations. Public Library of Sceinces. Biology 3: e247.
26. Underhill PA. 2004. A synopsis of extant Y chromosome diversity in East Asia and Oceania. In: Sagart L, Blench R, Sanchez-Mazas A, editors. The peopling of East Asia: Putting together archaeology, linguistics and genetics. London: Routledge Curzon. pp 301-19.
27. Underhill PA, Passarino G, Lin AA, Marzuki S, Oefner PJ, Cavalli-Sforza LL, Chambers GK. 2001a. Maori origins, Y-chromosome haplotypes and implications for human history in the Pacific. Human Mutation 17: 271-80.
28. Underhill PA, Passarino G, Lin AA, Shen P, Mirazon Lahr M, Foley RA, Oefner PJ, Cavalli-Sforza LL. 2001b. The phylogeography of Y chromosome binary haplotypes and the origins of modern human populations. Annals of Human Genetics 65: 43-62.
29. Whitfield LS, Sulston JE, Goodfellow PN. 1995. Sequence variation of the human Y chromosome. Nature 378: 379-80.
30. Wilder JA, Kingan SB, Mobasher Z, Pilkington MM, Hammer MF. 2004. Global patterns of human mitochondrial DNA and Y-chromosome structure are not influenced by higher migration rates of females versus males. Nature Genetics 36: 1122-5.
31. Y chromosome consortium (Ellis N and Hammer M, organizers). 2002. A nomenclature system for the tree of human Y-chromosomal binary haplogroups. Genome Research 12: 339-48.