Identification of biomarkers in breast cancer by gene expression profiling using human tissues

Genomics Data

Volumn 2, Issue , 2014, Pages 299-301

  Fu, Junjie ^a   Allen, William ^a   Xia, Amy ^a   Ma, Zhuofan ^a   Qi, Xin ^a  

^a UNIVERSITY OF FLORIDA   (United States)

Author keywords

Agilent SurePrint G3; Breast cancer; Gene expression profiling; Microarray

Indexed keywords

BIOLOGICAL MARKER; TRANSCRIPTOME;

ARTICLE; BREAST CANCER; CHEMICAL LABELING; CLINICAL ARTICLE; CONTROLLED STUDY; DNA MICROARRAY; FEMALE; GENE EXPRESSION PROFILING; GENE IDENTIFICATION; HUMAN; HUMAN TISSUE; MICROARRAY ANALYSIS; NUCLEOTIDE SEQUENCE; QUALITY CONTROL; RNA EXTRACTION; RNA HYBRIDIZATION;

EID: 84920578473     PISSN: 22135960     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.gdata.2014.09.004     Document Type: Article

References (9)

1. Liedtke C., Kiesel L. Breast cancer molecular subtypes - modern therapeutic concepts for targeted therapy of a heterogeneous entity. Maturitas 2012, 73(4):288-294.
2. Carey L.A., Perou C.M., Livasy C.A., Dressler L.G., Cowan D., Conway K., Karaca G., Troester M.A., Tse C.K., Edmiston S., Deming S.L., Geradts J., Cheang M.C., Nielsen T.O., Moorman P.G., Earp H.S., Millikan R.C. Race, breast cancer subtypes, and survival in the Carolina breast cancer study. JAMA 2006, 295(21):2492-2502.
3. Stan A.D., Ghose S., Gao X.M., Roberts R.C., Lewis-Amezcua K., Hatanpaa K.J., Tamminga C.A. Human postmortem tissue: what quality markers matter?. Brain Res. 2006, 1123:1-11.
4. Ares M. Preparation of fluorescent-dye-labeled cDNA from RNA for microarray hybridization. Cold Spring Harb. Protoc. 2014, 2014(1):119-123.
5. Ares M. Scanning microarray slides. Cold Spring Harb. Protoc. 2014, 2014(2):214-218.
6. Yang Y.H., Dudoit S., Luu P., Lin D.M., Peng V., Ngai J., Speed T.P. Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation. Nucleic Acids Res. 2002, 30(4):e15.
7. Smyth G.K. Linear models and empirical Bayes methods for assessing differential expression in microarray experiments. Stat. Appl. Genet. Mol. Biol. 2004, 3. (Article3).
8. Brazma A., Vilo J. Gene expression data analysis. FEBS Lett. 2000, 480(1):17-24.
9. Steinhoff C., Vingron M. Normalization and quantification of differential expression in gene expression microarrays. Brief. Bioinform. 2006, 7(2):166-177.