-
1
-
-
84887852466
-
Genome-wide chromatin interactions of the Nanog locus in pluripotency, differentiation, and reprogramming
-
Apostolou E, Ferrari F, Walsh RM, Bar-Nur O, Stadtfeld M, Cheloufi S, Stuart HT, Polo JM, Ohsumi T, Borowsk ML, et al. 2013. Genome-wide chromatin interactions of the Nanog locus in pluripotency, differentiation, and reprogramming. Cell Stem Cell 12: 699–712.
-
(2013)
Cell Stem Cell
, vol.12
, pp. 699-712
-
-
Apostolou, E.1
Ferrari, F.2
Walsh, R.M.3
Bar-Nur, O.4
Stadtfeld, M.5
Cheloufi, S.6
Stuart, H.T.7
Polo, J.M.8
Ohsumi, T.9
Borowsk, M.L.10
-
2
-
-
70349093119
-
Senescence impairs successful reprogramming to pluripotent stem cells
-
Banito A, Rashid ST, Acosta JC, Li S, Pereira CF, Geti I, Pinho S, Silva JC, Azuara V, Walsh M, et al. 2009. Senescence impairs successful reprogramming to pluripotent stem cells. Genes Dev 23: 2134–2139.
-
(2009)
Genes Dev
, vol.23
, pp. 2134-2139
-
-
Banito, A.1
Rashid, S.T.2
Acosta, J.C.3
Li, S.4
Pereira, C.F.5
Geti, I.6
Pinho, S.7
Silva, J.C.8
Azuara, V.9
Walsh, M.10
-
3
-
-
84875190221
-
Genome architecture: Domain organization of interphase chromosomes
-
Bickmore WA, van Steensel B. 2013. Genome architecture: domain organization of interphase chromosomes. Cell 152: 1270–1284.
-
(2013)
Cell
, vol.152
, pp. 1270-1284
-
-
Bickmore, W.A.1
van Steensel, B.2
-
4
-
-
33747097562
-
ATM stabilizes DNA double-strand-break complexes during V(D)J recombination
-
Bredemeyer AL, Sharma GG, Huang CY, Helmink BA, Walker LM, Khor KC, Nuskey B, Sullivan KE, Pandita TK, Bassing CH, et al. 2006. ATM stabilizes DNA double-strand-break complexes during V(D)J recombination. Nature 442: 466–470.
-
(2006)
Nature
, vol.442
, pp. 466-470
-
-
Bredemeyer, A.L.1
Sharma, G.G.2
Huang, C.Y.3
Helmink, B.A.4
Walker, L.M.5
Khor, K.C.6
Nuskey, B.7
Sullivan, K.E.8
Pandita, T.K.9
Bassing, C.H.10
-
5
-
-
65349123354
-
A genome-scale RNAi screen for Oct4 modulators defines a role of the Paf1 complex for embryonic stem cell identity
-
Ding L, Paszkowski-Rogacz M, Nitzsche A, Slabicki MM, Heninger AK, de Vries I, Kittler R, Junqueira M, Shevchenko A, Schulz H, et al. 2009. A genome-scale RNAi screen for Oct4 modulators defines a role of the Paf1 complex for embryonic stem cell identity. Cell Stem Cell 4: 403–415.
-
(2009)
Cell Stem Cell
, vol.4
, pp. 403-415
-
-
Ding, L.1
Paszkowski-Rogacz, M.2
Nitzsche, A.3
Slabicki, M.M.4
Heninger, A.K.5
de Vries, I.6
Kittler, R.7
Junqueira, M.8
Shevchenko, A.9
Schulz, H.10
-
7
-
-
34547232986
-
Nontranscriptional control of DNA replication by c-Myc
-
Dominguez-Sola D, Ying CY, Grandori C, Ruggiero L, Chen B, Li M, Gallowa DA, Gu W, Gautie J, Dalla-Favera R. 2007. Nontranscriptional control of DNA replication by c-Myc. Nature 448: 445–451.
-
(2007)
Nature
, vol.448
, pp. 445-451
-
-
Dominguez-Sola, D.1
Ying, C.Y.2
Grandori, C.3
Ruggiero, L.4
Chen, B.5
Li, M.6
Gallowa, D.A.7
Gu, W.8
Gautie, J.9
Dalla-Favera, R.10
-
8
-
-
84879208137
-
Cohesin at active genes: A unifying theme for cohesin and gene expression from model organisms to humans
-
Dorsett D, Merkenschlager M. 2013. Cohesin at active genes: a unifying theme for cohesin and gene expression from model organisms to humans. Curr Opin Cell Biol 25: 3217–3233.
-
(2013)
Curr Opin Cell Biol
, vol.25
, pp. 3217-3233
-
-
Dorsett, D.1
Merkenschlager, M.2
-
9
-
-
78049391383
-
Dosagesensitive regulation of cohesin chromosome binding and dynamics by Nipped-B, Pds5, and Wapl
-
Gause M, Misulovin Z, Bilyeu A, Dorsett D. 2010. Dosagesensitive regulation of cohesin chromosome binding and dynamics by Nipped-B, Pds5, and Wapl. Mol Cell Biol 30: 4940–4951.
-
(2010)
Mol Cell Biol
, vol.30
, pp. 4940-4951
-
-
Gause, M.1
Misulovin, Z.2
Bilyeu, A.3
Dorsett, D.4
-
10
-
-
33746486793
-
Livecell imaging reveals a stable cohesin-chromatin interaction after but not before DNA replication
-
Gerlich D, Koch B, Dupeux F, Peters JM, Ellenberg J. 2006. Livecell imaging reveals a stable cohesin-chromatin interaction after but not before DNA replication. Curr Biol 16: 1571–1578.
-
(2006)
Curr Biol
, vol.16
, pp. 1571-1578
-
-
Gerlich, D.1
Koch, B.2
Dupeux, F.3
Peters, J.M.4
Ellenberg, J.5
-
11
-
-
4644280172
-
Scc2 couples replication licensing to sister chromatid cohesion in Xenopusegg extracts
-
Gillespie PJ, Hirano T. 2004. Scc2 couples replication licensing to sister chromatid cohesion in Xenopus egg extracts. Curr Biol 14: 1598–1603.
-
(2004)
Curr Biol
, vol.14
, pp. 1598-1603
-
-
Gillespie, P.J.1
Hirano, T.2
-
12
-
-
78650186593
-
Cohesin organizes chromatin loops at DNA replication factories
-
Guillou E, Ibarra A, Coulon V, Casado-Vela J, Rico D, Casal I, Schwob E, Losada A, Mendez J. 2010. Cohesin organizes chromatin loops at DNA replication factories. Genes Dev 24: 2812–2822.
-
(2010)
Genes Dev
, vol.24
, pp. 2812-2822
-
-
Guillou, E.1
Ibarra, A.2
Coulon, V.3
Casado-Vela, J.4
Rico, D.5
Casal, I.6
Schwob, E.7
Losada, A.8
Mendez, J.9
-
13
-
-
0017032838
-
Injected nuclei in frog oocytes: Fate, enlargement, and chromatin dispersal
-
Gurdon JB. 1976. Injected nuclei in frog oocytes: fate, enlargement, and chromatin dispersal. J Embryol Exp Morphol 36:523–540.
-
(1976)
J Embryol Exp Morphol
, vol.36
, pp. 523-540
-
-
Gurdon, J.B.1
-
15
-
-
67650997080
-
Cohesins form chromosomal cis-interactions at the developmentally regulated IFNG locus
-
Hadjur S, Williams LM, Ryan NK, Cobb BS, Sexton T, Fraser P, Fisher AG, Merkenschlager M. 2009. Cohesins form chromosomal cis-interactions at the developmentally regulated IFNG locus. Nature 460: 410–413.
-
(2009)
Nature
, vol.460
, pp. 410-413
-
-
Hadjur, S.1
Williams, L.M.2
Ryan, N.K.3
Cobb, B.S.4
Sexton, T.5
Fraser, P.6
Fisher, A.G.7
Merkenschlager, M.8
-
16
-
-
77951938264
-
Mammalian nuclear transplantation to germinal vesical stage Xenopusoocytes—a method for quantitative transcriptional reprogramming
-
Halley-Scott RP, Pasque V, Astrand C, Miyamoto K, Simeoni I, Jullien J, Gurdon JB. 2010. Mammalian nuclear transplantation to germinal vesical stage Xenopus oocytes—a method for quantitative transcriptional reprogramming. Methods 51: 56–65.
-
(2010)
Methods
, vol.51
, pp. 56-65
-
-
Halley-Scott, R.P.1
Pasque, V.2
Astrand, C.3
Miyamoto, K.4
Simeoni, I.5
Jullien, J.6
Gurdon, J.B.7
-
17
-
-
71449109765
-
Direct cell reprogramming is a stochastic process amenable to acceleration
-
Hanna J, Saha K, Pando B, van Zon J, Lengner CJ, Creyghton MP, vanOudenaarden A, Jaenisch R. 2009. Direct cell reprogramming is a stochastic process amenable to acceleration. Nature 462: 595–601.
-
(2009)
Nature
, vol.462
, pp. 595-601
-
-
Hanna, J.1
Saha, K.2
Pando, B.3
van Zon, J.4
Lengner, C.J.5
Creyghton, M.P.6
Vanoudenaarden, A.7
Jaenisch, R.8
-
18
-
-
77649261872
-
Cell types pecificity of chromatin organization mediated by CTCF and cohesin
-
Hou C, Dale R, Dean A. 2010. Cell types pecificity of chromatin organization mediated by CTCF and cohesin. Proc Natl Acad Sci 10: 3651–3656.
-
(2010)
Proc Natl Acad Sci
, vol.10
, pp. 3651-3656
-
-
Hou, C.1
Dale, R.2
Dean, A.3
-
19
-
-
64349096829
-
A genome-wide RNAi screen identifies a new transcriptional module required for self-renewal
-
Hu G, Kim J, Xu Q, Leng Y, Orkin SH, Elledge SJ. 2009. A genome-wide RNAi screen identifies a new transcriptional module required for self-renewal. Genes Dev 23:837–848.
-
(2009)
Genes Dev
, vol.23
, pp. 837-848
-
-
Hu, G.1
Kim, J.2
Xu, Q.3
Leng, Y.4
Orkin, S.H.5
Elledge, S.J.6
-
20
-
-
84867897054
-
HIRA dependent H3.3 deposition is required for transcriptional reprogramming following nuclear transfer to Xenopus oocytes
-
Jullien J, Astrand C, Szenker E, Garrett N, Almouzni G, Gurdon JB. 2012. HIRA dependent H3.3 deposition is required for transcriptional reprogramming following nuclear transfer to Xenopus oocytes. Epigenetics Chrom 5: 17.
-
(2012)
Epigenetics Chrom
, vol.5
-
-
Jullien, J.1
Astrand, C.2
Szenker, E.3
Garrett, N.4
Almouzni, G.5
Gurdon, J.B.6
-
21
-
-
77957139539
-
Mediator and cohesin connect gene expression and chromatin architecture
-
Kagey MH, Newman JJ, Bilodeau S, Zhan Y, Orlando DA, van Berkum NL, Ebmeier CC, Goossens J, Rahl PB, Levine SS, et al. 2010. Mediator and cohesin connect gene expression and chromatin architecture. Nature 467: 430–435.
-
(2010)
Nature
, vol.467
, pp. 430-435
-
-
Kagey, M.H.1
Newman, J.J.2
Bilodeau, S.3
Zhan, Y.4
Orlando, D.A.5
Van Berkum, N.L.6
Ebmeier, C.C.7
Goossens, J.8
Rahl, P.B.9
Levine, S.S.10
-
22
-
-
40749104852
-
An extended transcriptional network for pluripotency of embryonic stem cells
-
Kim J, Chu J, Shen X, Wang J, Orkin SH. 2008. An extended transcriptional network for pluripotency of embryonic stem cells. Cell 132: 1049–1061.
-
(2008)
Cell
, vol.132
, pp. 1049-1061
-
-
Kim, J.1
Chu, J.2
Shen, X.3
Wang, J.4
Orkin, S.H.5
-
23
-
-
77957757417
-
A Myc network accounts for similarities between embryonic stem and cancer cell transcription programs
-
Kim J, Woo AJ, Chu J, Snow JW, Fujiwara Y, Kim CG, Cantor AB, Orkin SH. 2010. A Myc network accounts for similarities between embryonic stem and cancer cell transcription programs. Cell 143: 313–324.
-
(2010)
Cell
, vol.143
, pp. 313-324
-
-
Kim, J.1
Woo, A.J.2
Chu, J.3
Snow, J.W.4
Fujiwara, Y.5
Kim, C.G.6
Cantor, A.B.7
Orkin, S.H.8
-
24
-
-
69349103956
-
The Ink4/Arf locus is a barrier for iPS cell reprogramming
-
Li H, Collado M, Villasante A, Strati K, Ortega S, Canamero M, Blasco MA, Serrano M. 2009. The Ink4/Arf locus is a barrier for iPS cell reprogramming. Nature 460: 1136–1139.
-
(2009)
Nature
, vol.460
, pp. 1136-1139
-
-
Li, H.1
Collado, M.2
Villasante, A.3
Strati, K.4
Ortega, S.5
Canamero, M.6
Blasco, M.A.7
Serrano, M.8
-
25
-
-
13944273471
-
P53 induces differentiation of mouse embryonic stem cells by suppressing Nanog expression
-
Lin T, Chao C, Saito S, Mazur SJ, Murphy ME, Appella E, Xu Y. 2005. p53 induces differentiation of mouse embryonic stem cells by suppressing Nanog expression. Nat Cell Biol 7: 165–171.
-
(2005)
Nat Cell Biol
, vol.7
, pp. 165-171
-
-
Lin, T.1
Chao, C.2
Saito, S.3
Mazur, S.J.4
Murphy, M.E.5
Appella, E.6
Xu, Y.7
-
26
-
-
84867021989
-
Transcriptional amplification in tumor cells with elevated c-Myc
-
Lin CY, Loven J, Rahl PB, Paranal RM, Burge CB, Bradner JE, Lee TI, Young RA. 2012. Transcriptional amplification in tumor cells with elevated c-Myc. Cell 151: 56–67.
-
(2012)
Cell
, vol.151
, pp. 56-67
-
-
Lin, C.Y.1
Loven, J.2
Rahl, P.B.3
Paranal, R.M.4
Burge, C.B.5
Bradner, J.E.6
Lee, T.I.7
Young, R.A.8
-
27
-
-
75649109712
-
DrosophilaORC localizes to open chromatin and marks sites of cohesin complex loading
-
MacAlpine HK, Gordan R, Powell SK, Hartemink AJ, MacAlpine DM. 2010. Drosophila ORC localizes to open chromatin and marks sites of cohesin complex loading. Genome Res 20: 201–211.
-
(2010)
Genome Res
, vol.20
, pp. 201-211
-
-
Macalpine, H.K.1
Gordan, R.2
Powell, S.K.3
Hartemink, A.J.4
Macalpine, D.M.5
-
28
-
-
51649129472
-
Activation of p53 by nutlin leads to rapid differentiation of human embryonic stem cells
-
Maimets T, Neganova I, Armstrong L, Lako M. 2008. Activation of p53 by nutlin leads to rapid differentiation of human embryonic stem cells. Oncogene 27: 5277–5287.
-
(2008)
Oncogene
, vol.27
, pp. 5277-5287
-
-
Maimets, T.1
Neganova, I.2
Armstrong, L.3
Lako, M.4
-
29
-
-
84875127327
-
CTCF and cohesin: Linking gene regulatory elements with their targets
-
Merkenschlager M, Odom DT. 2013. CTCF and cohesin: linking gene regulatory elements with their targets. Cell 152: 1285–1297.
-
(2013)
Cell
, vol.152
, pp. 1285-1297
-
-
Merkenschlager, M.1
Odom, D.T.2
-
30
-
-
65649123756
-
Architectural roles of multiple chromatin insulators at the human apolipoprotein gene cluster
-
Mishiro T, Ishihara K, Hino S, Tsutsumi S, Aburatani H, Shirahige K, Kinoshita Y, Nakao M. 2009. Architectural roles of multiple chromatin insulators at the human apolipoprotein gene cluster. EMBO J 28: 1234–1245.
-
(2009)
EMBO J
, vol.28
, pp. 1234-1245
-
-
Mishiro, T.1
Ishihara, K.2
Hino, S.3
Tsutsumi, S.4
Aburatani, H.5
Shirahige, K.6
Kinoshita, Y.7
Nakao, M.8
-
31
-
-
73349127026
-
Cohesin: Its roles and mechanisms
-
Nasmyth K, Haering CH. 2009. Cohesin: its roles and mechanisms. Annu Rev Genet 43: 525–558.
-
(2009)
Annu Rev Genet
, vol.43
, pp. 525-558
-
-
Nasmyth, K.1
Haering, C.H.2
-
32
-
-
73649145481
-
Cohesin is required for higher-order chromatin conformation at the imprinted IGF2-H19 locus
-
e1000739
-
Nativio R, Wendt KS, Ito Y, Huddleston JE, Uribe-Lewis S, Woodfine K, Krueger C, Reik W, Peters JM, Murrell A. 2009.Cohesin is required for higher-order chromatin conformation at the imprinted IGF2-H19 locus. PLoS Genet 5: e1000739.
-
(2009)
Plos Genet
, vol.5
-
-
Nativio, R.1
Wendt, K.S.2
Ito, Y.3
Huddleston, J.E.4
Uribe-Lewis, S.5
Woodfine, K.6
Krueger, C.7
Reik, W.8
Peters, J.M.9
Murrell, A.10
-
33
-
-
79955929062
-
RAD21 cooperates with pluripotency transcription factors in the maintenance of embryonic stem cell identity
-
e19470
-
Nitzsche A, Paszkowski-Rogacz M, Matarese F, Janssen-Megens EM, Hubner NC, Schulz H, de Vries I, Ding L, Huebner N, Mann M, et al. 2011. RAD21 cooperates with pluripotency transcription factors in the maintenance of embryonic stem cell identity. PLoS ONE 6: e19470.
-
(2011)
Plos ONE
, vol.6
-
-
Nitzsche, A.1
Paszkowski-Rogacz, M.2
Matarese, F.3
Janssen-Megens, E.M.4
Hubner, N.C.5
Schulz, H.6
de Vries, I.7
Ding, L.8
Huebner, N.9
Mann, M.10
-
34
-
-
0034028901
-
Quantitative expression of Oct-3/4 defines differentiation, dedifferentiation or selfrenewal of ES cells
-
Niwa H, Miyazaki J, Smith AG. 2000. Quantitative expression of Oct-3/4 defines differentiation, dedifferentiation or selfrenewal of ES cells. Nat Genet 24: 372–376.
-
(2000)
Nat Genet
, vol.24
, pp. 372-376
-
-
Niwa, H.1
Miyazaki, J.2
Smith, A.G.3
-
35
-
-
52949106486
-
Heterokaryon-based reprogramming of human B lymphocytes for pluripotency requires Oct4 but not Sox2
-
e1000170
-
Pereira CF, Terranova R, Ryan NK, Santos J, Morris KJ, Cui W, Merkenschlager M, Fisher AG. 2008. Heterokaryon-based reprogramming of human B lymphocytes for pluripotency requires Oct4 but not Sox2. PLoS Genet 4: e1000170.
-
(2008)
Plos Genet
, vol.4
-
-
Pereira, C.F.1
Terranova, R.2
Ryan, N.K.3
Santos, J.4
Morris, K.J.5
Cui, W.6
Merkenschlager, M.7
Fisher, A.G.8
-
36
-
-
84878860751
-
Architectural protein subclasses shape 3D organization of genomes during lineage commitment
-
Phillips-Cremins JE, Sauria ME, Sanyal A, Gerasimova TI, Lajoie BR, Bell JS, Ong CT, Hookway TA, Guo C, Sun Y, et al. 2013. Architectural protein subclasses shape 3D organization of genomes during lineage commitment. Cell 153: 1281–1295.
-
(2013)
Cell
, vol.153
, pp. 1281-1295
-
-
Phillips-Cremins, J.E.1
Sauria, M.E.2
Sanyal, A.3
Gerasimova, T.I.4
Lajoie, B.R.5
Bell, J.S.6
Ong, C.T.7
Hookway, T.A.8
Guo, C.9
Sun, Y.10
-
37
-
-
77955267029
-
Positive regulation of c-Myc by cohesin is direct, and evolutionarily conserved
-
Rhodes JM, Bentley FK, Print CG, Dorsett D, Misulovin Z, Dickinson EJ, Crosier KE, Crosier PS, Horsfield JA. 2010.Positive regulation of c-Myc by cohesin is direct, and evolutionarily conserved. Dev Biol 344: 637–649.
-
(2010)
Dev Biol
, vol.344
, pp. 637-649
-
-
Rhodes, J.M.1
Bentley, F.K.2
Print, C.G.3
Dorsett, D.4
Misulovin, Z.5
Dickinson, E.J.6
Crosier, K.E.7
Crosier, P.S.8
Horsfield, J.A.9
-
38
-
-
67650529804
-
Regulation of the Drosophila enhancer of split and invected-engrailed gene complexes by sister chromatid cohesion proteins
-
e6202
-
Schaaf CA, Misulovin Z, Sahota G, Siddiqui AM, Schwartz YB, Kahn TG, Pirrotta V, Gause M, Dorsett D. 2009. Regulation of the Drosophila enhancer of split and invected-engrailed gene complexes by sister chromatid cohesion proteins. PLoS ONE 4: e6202.
-
(2009)
Plos ONE
, vol.4
-
-
Schaaf, C.A.1
Misulovin, Z.2
Sahota, G.3
Siddiqui, A.M.4
Schwartz, Y.B.5
Kahn, T.G.6
Pirrotta, V.7
Gause, M.8
Dorsett, D.9
-
39
-
-
0037441645
-
Rapid generation of inducible mouse mutants
-
e12
-
Seibler J, Zevnik B, Kuter-Luks B, Andreas S, Kern H, Hennek T, Rode A, Heimann C, Faust N, Kauselmann G, et al. 2003.Rapid generation of inducible mouse mutants. Nucleic Acids Res 31: e12.
-
(2003)
Nucleic Acids Res
, vol.31
-
-
Seibler, J.1
Zevnik, B.2
Kuter-Luks, B.3
Reas, S.4
Kern, H.5
Hennek, T.6
Rode, A.7
Heimann, C.8
Faust, N.9
Kauselmann, G.10
-
40
-
-
80052042965
-
A role for cohesin in T-cell-receptor rearrangement and thymocyte differentiation
-
Seitan VC, Hao B, Tachibana-Konwalski K, Lavagnolli T, Mira- Bontenbal H, Brown KE, Teng G, Carroll T, Terry A, Horan K, et al. 2011. A role for cohesin in T-cell-receptor rearrangement and thymocyte differentiation. Nature 476: 467–471.
-
(2011)
Nature
, vol.476
, pp. 467-471
-
-
Seitan, V.C.1
Hao, B.2
Tachibana-Konwalski, K.3
Lavagnolli, T.4
Mira-Bontenbal, H.5
Brown, K.E.6
Teng, G.7
Carroll, T.8
Terry, A.9
Horan, K.10
-
41
-
-
84890504911
-
Cohesin-based chromatin interactions enable regulated gene expression within preexisting architectural compartments
-
Seitan VC, Faure AJ, Zhan Y, McCord RP, Lajoie BR, Ing- Simmons E, Lenhard B, Giorgetti L, Heard E, Fisher AG, et al. 2013. Cohesin-based chromatin interactions enable regulated gene expression within preexisting architectural compartments. Genome Res 23: 2066–2077.
-
(2013)
Genome Res
, vol.23
, pp. 2066-2077
-
-
Seitan, V.C.1
Faure, A.J.2
Zhan, Y.3
McCord, R.P.4
Lajoie, B.R.5
Ing-Simmons, E.6
Lenhard, B.7
Giorgetti, L.8
Heard, E.9
Fisher, A.G.10
-
42
-
-
84890566970
-
Cohesin-mediated interactions organize chromosomal domain architecture
-
Sofueva S, Yaffe E, Chan WC, Georgopoulou D, Vietri Rudan M, Mira-Bontenbal H, Pollard SM, Schroth GP, Tanay A, Hadjur S. 2013. Cohesin-mediated interactions organize chromosomal domain architecture. EMBO J 32: 3119–3129.
-
(2013)
EMBO J
, vol.32
, pp. 3119-3129
-
-
Sofueva, S.1
Yaffe, E.2
Chan, W.C.3
Georgopoulou, D.4
Vietri Rudan, M.5
Mira-Bontenbal, H.6
Pollard, S.M.7
Schroth, G.P.8
Tanay, A.9
Hadjur, S.10
-
43
-
-
84870058502
-
Facilitators and impediments of the pluripotency reprogramming factors’ initial engagement with the genome
-
Soufi A, Donahue G, Zaret KS. 2012. Facilitators and impediments of the pluripotency reprogramming factors’ initial engagement with the genome. Cell 151: 994–1004.
-
(2012)
Cell
, vol.151
, pp. 994-1004
-
-
Soufi, A.1
Donahue, G.2
Zaret, K.S.3
-
44
-
-
0025786164
-
Bcl-2 transgene inhibits T cell death and perturbs thymic self-censorship
-
Strasser A, Harris AW, Cory S. 1991. Bcl-2 transgene inhibits T cell death and perturbs thymic self-censorship. Cell 67: 889–899.
-
(1991)
Cell
, vol.67
, pp. 889-899
-
-
Strasser, A.1
Harris, A.W.2
Cory, S.3
-
45
-
-
0035797898
-
Nuclear reprogramming of somatic cells by in vitro hybridization with ES cells
-
Tada M, Takahama Y, Abe K, Nakatsuji N, Tada T. 2001. Nuclear reprogramming of somatic cells by in vitro hybridization with ES cells. Curr Biol 11: 1553–1558.
-
(2001)
Curr Biol
, vol.11
, pp. 1553-1558
-
-
Tada, M.1
Takahama, Y.2
Abe, K.3
Nakatsuji, N.4
Tada, T.5
-
46
-
-
33747195353
-
Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors
-
Takahashi K, Yamanaka S. 2006. Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors. Cell 126: 663–676.
-
(2006)
Cell
, vol.126
, pp. 663-676
-
-
Takahashi, K.1
Yamanaka, S.2
-
47
-
-
5444220661
-
Recruitment of Xenopus Scc2 and cohesin to chromatin requires the pre-replication complex
-
Takahashi TS, Yiu P, Chou MF, Gygi S, Walter JC. 2004. Recruitment of Xenopus Scc2 and cohesin to chromatin requires the pre-replication complex. Nat Cell Biol 6: 991–996.
-
(2004)
Nat Cell Biol
, vol.6
, pp. 991-996
-
-
Takahashi, T.S.1
Yiu, P.2
Chou, M.F.3
Gygi, S.4
Walter, J.C.5
-
48
-
-
84885592677
-
Wapl is an essential regulator of chromatin structure and chromosome segregation
-
Tedeschi A, Wutz G, Huet S, Jaritz M, Wuensche A, Schirghuber E, Davidson IF, Tang W, Cisneros DA, Bhaskara V, et al. 2013. Wapl is an essential regulator of chromatin structure and chromosome segregation. Nature 501: 564–568.
-
(2013)
Nature
, vol.501
, pp. 564-568
-
-
Tedeschi, A.1
Wutz, G.2
Huet, S.3
Jaritz, M.4
Wuensche, A.5
Schirghuber, E.6
Davidson, I.F.7
Tang, W.8
Cisneros, D.A.9
Bhaskara, V.10
-
49
-
-
70449659953
-
Cohesin acetylation speeds the replication fork
-
Terret ME, Sherwood R, Rahman S, Qin J, Jallepalli PV. 2009. Cohesin acetylation speeds the replication fork. Nature 462:231–234.
-
(2009)
Nature
, vol.462
, pp. 231-234
-
-
Terret, M.E.1
Sherwood, R.2
Rahman, S.3
Qin, J.4
Jallepalli, P.V.5
-
50
-
-
84867399846
-
Cohesin association to replication sites depends on rad50 and promotes fork restart
-
Tittel-Elmer M, Lengronne A, Davidson MB, Bacal J, Francois P, Hohl M, Petrini JH, Pasero P, Cobb JA. 2012. Cohesin association to replication sites depends on rad50 and promotes fork restart. Mol Cell 48: 98–108.
-
(2012)
Mol Cell
, vol.48
, pp. 98-108
-
-
Tittel-Elmer, M.1
Lengronne, A.2
Davidson, M.B.3
Bacal, J.4
Francois, P.5
Hohl, M.6
Petrini, J.H.7
Pasero, P.8
Cobb, J.A.9
-
51
-
-
84874059035
-
DNA synthesis is required for reprogramming mediated by stem cell fusion
-
Tsubouchi T, Soza-Ried J, Brown K, Piccolo FM, Cantone I, Landeira D, Bagci H, Hochegger H, Merkenschlager M, Fisher AG. 2013. DNA synthesis is required for reprogramming mediated by stem cell fusion. Cell 152: 873–883.
-
(2013)
Cell
, vol.152
, pp. 873-883
-
-
Tsubouchi, T.1
Soza-Ried, J.2
Brown, K.3
Piccolo, F.M.4
Cantone, I.5
Landeira, D.6
Bagci, H.7
Hochegger, H.8
Merkenschlager, M.9
Fisher, A.G.10
-
52
-
-
69349098273
-
Immortalization eliminates a roadblock during cellular reprogramming into iPS cells
-
Utikal J, Polo JM, Stadtfeld M, Maherali N, Kulalert W, Walsh RM, Khalil A, Rheinwald JG, Hochedlinger K. 2009. Immortalization eliminates a roadblock during cellular reprogramming into iPS cells. Nature 460: 1145–1148.
-
(2009)
Nature
, vol.460
, pp. 1145-1148
-
-
Utikal, J.1
Polo, J.M.2
Stadtfeld, M.3
Maherali, N.4
Kulalert, W.5
Walsh, R.M.6
Khalil, A.7
Rheinwald, J.G.8
Hochedlinger, K.9
-
53
-
-
84890157171
-
Transcriptional control of DNA replication licensing by Myc
-
Valovka T, Schonfeld M, Raffeiner P, Breuker K, Dunzendorfer-Matt T, Hartl M, Bister K. 2013. Transcriptional control of DNA replication licensing by Myc. Sci Rep 3: 3444.
-
(2013)
Sci Rep
, vol.3
-
-
Valovka, T.1
Schonfeld, M.2
Raffeiner, P.3
Breuker, K.4
Dunzendorfer-Matt, T.5
Hartl, M.6
Bister, K.7
-
54
-
-
84887835943
-
Klf4 organizes long-range chromosomal interactions with the oct4 locus in reprogramming and pluripotency
-
Wei Z, Gao F, Kim S, Yang H, Lyu J, An W, Wang K, Lu W. 2013. Klf4 organizes long-range chromosomal interactions with the oct4 locus in reprogramming and pluripotency. Cell Stem Cell 13: 36–47.
-
(2013)
Cell Stem Cell
, vol.13
, pp. 36-47
-
-
Wei, Z.1
Gao, F.2
Kim, S.3
Yang, H.4
Lyu, J.5
An, W.6
Wang, K.7
Lu, W.8
-
55
-
-
44349170450
-
The ground state of embryonic stem cell self-renewal
-
Ying QL, Wray J, Nichols J, Batlle-Morera L, Doble B, Woodgett J, Cohen P, Smith A. 2008. The ground state of embryonic stem cell self-renewal. Nature 453: 519–523.
-
(2008)
Nature
, vol.453
, pp. 519-523
-
-
Ying, Q.L.1
Wray, J.2
Nichols, J.3
Batlle-Morera, L.4
Doble, B.5
Woodgett, J.6
Cohen, P.7
Smith, A.8
-
56
-
-
0033387530
-
Germline-specific expression of the Oct-4/green fluorescent protein (GFP) transgene in mice
-
Yoshimizu T, Sugiyama N, De Felice M, Yeom YI, Ohbo K, Masuko K, Obinata M, Abe K, Scholer HR, Matsui Y. 1999. Germline-specific expression of the Oct-4/green fluorescent protein (GFP) transgene in mice. Dev Growth Differ 41: 675–684.
-
(1999)
Dev Growth Differ
, vol.41
, pp. 675-684
-
-
Yoshimizu, T.1
Sugiyama, N.2
De Felice, M.3
Yeom, Y.I.4
Ohbo, K.5
Masuko, K.6
Obinata, M.7
Abe, K.8
Scholer, H.R.9
Matsui, Y.10
-
57
-
-
84893155560
-
Intrachromosomal looping is required for activation of endogenous pluripotency genes during reprogramming
-
Zhang H, Jiao W, Sun L, Fan J, Chen M, Wang H, Xu X, Shen A, Li T, Niu B, et al. 2013. Intrachromosomal looping is required for activation of endogenous pluripotency genes during reprogramming. Cell Stem Cell 13: 30–35.
-
(2013)
Cell Stem Cell
, vol.13
, pp. 30-35
-
-
Zhang, H.1
Jiao, W.2
Sun, L.3
Fan, J.4
Chen, M.5
Wang, H.6
Xu, X.7
Shen, A.8
Li, T.9
Niu, B.10
-
58
-
-
84892934183
-
Cohesin and CTCF differentially affect chromatin architecture and gene expression in human cells
-
Zuin J, Dixon JR, van der Reijden MI, Ye Z, Kolovos P, Brouwer RW, van de Corput MP, van de Werken HJ, Knoch TA, van Ijcken WF, et al. 2014. Cohesin and CTCF differentially affect chromatin architecture and gene expression in human cells. Proc Natl Acad Sci 111: 996–1001.
-
(2014)
Proc Natl Acad Sci
, vol.111
, pp. 996-1001
-
-
Zuin, J.1
Dixon, J.R.2
van der Reijden, M.I.3
Ye, Z.4
Kolovos, P.5
Brouwer, R.W.6
van de Corput, M.P.7
van de Werken, H.J.8
Knoch, T.A.9
van Ijcken, W.F.10
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