-
1
-
-
84975795680
-
An integrated map of genetic variation from 1,092 human genomes
-
The 1000 Genomes Project Consortium. 2012. An integrated map of genetic variation from 1,092 human genomes. Nature 491: 56-65.
-
(2012)
Nature
, vol.491
, pp. 56-65
-
-
-
2
-
-
80053453491
-
Separation of recombination and SOS response in Escherichia coli RecA suggests LexA interaction sites
-
Adikesavan AK, Katsonis P, Marciano DC, Lua R, Herman C, Lichtarge O. 2011. Separation of recombination and SOS response in Escherichia coli RecA suggests LexA interaction sites. PLoS Genet 7: e1002244.
-
(2011)
PLoS Genet
, vol.7
, pp. e1002244
-
-
Adikesavan, A.K.1
Katsonis, P.2
Marciano, D.C.3
Lua, R.4
Herman, C.5
Lichtarge, O.6
-
3
-
-
77951640946
-
A method and server for predicting damaging missense mutations
-
Adzhubei I, Schmidt S, Peshkin L, Ramensky V, Gerasimova A, Bork P, Kondrashov A, Sunyaev S. 2010. A method and server for predicting damaging missense mutations. Nat Methods 7: 248-249.
-
(2010)
Nat Methods
, vol.7
, pp. 248-249
-
-
Adzhubei, I.1
Schmidt, S.2
Peshkin, L.3
Ramensky, V.4
Gerasimova, A.5
Bork, P.6
Kondrashov, A.7
Sunyaev, S.8
-
4
-
-
84887309484
-
Prediction and experimental validation of enzyme substrate specificity in protein structures
-
Amin S, Erdin S, Ward R, Lua R, Lichtarge O. 2013. Prediction and experimental validation of enzyme substrate specificity in protein structures. Proc Natl Acad Sci 110: 45.
-
(2013)
Proc Natl Acad Sci
, vol.110
, pp. 45
-
-
Amin, S.1
Erdin, S.2
Ward, R.3
Lua, R.4
Lichtarge, O.5
-
5
-
-
44349132708
-
Common and rare variants in multifactorial susceptibility to common diseases
-
Bodmer W, Bonilla C. 2008. Common and rare variants in multifactorial susceptibility to common diseases. Nat Genet 40: 695-701.
-
(2008)
Nat Genet
, vol.40
, pp. 695-701
-
-
Bodmer, W.1
Bonilla, C.2
-
6
-
-
0037373275
-
Discovering genotypes underlying human phenotypes: Past successes for Mendelian disease, future approaches for complex disease
-
Botstein D, Risch N. 2003. Discovering genotypes underlying human phenotypes: past successes for Mendelian disease, future approaches for complex disease. Nat Genet 33: 228-237.
-
(2003)
Nat Genet
, vol.33
, pp. 228-237
-
-
Botstein, D.1
Risch, N.2
-
7
-
-
84867781208
-
Epistasis as the primary factor in molecular evolution
-
Breen MS, Kemena C, Vlasov PK, Notredame C, Kondrashov FA. 2012. Epistasis as the primary factor in molecular evolution. Nature 490: 535-538.
-
(2012)
Nature
, vol.490
, pp. 535-538
-
-
Breen, M.S.1
Kemena, C.2
Vlasov, P.K.3
Notredame, C.4
Kondrashov, F.A.5
-
8
-
-
84884994218
-
The Cancer Genome Atlas Pan-Cancer analysis project
-
The Cancer Genome Atlas Research Network, Weinstein JN, Collisson EA, Mills GB, Mills Shaw KR, Ozenberger BA, Ellrott K, Shmulevich I, Sander C, Stuart JM. 2013. The Cancer Genome Atlas Pan-Cancer analysis project. Nat Genet 45: 1113-1120.
-
(2013)
Nat Genet
, vol.45
, pp. 1113-1120
-
-
The Cancer Genome Atlas Research Network1
Weinstein, J.N.2
Collisson, E.A.3
Mills, G.B.4
Mills Shaw, K.R.5
Ozenberger, B.A.6
Ellrott, K.7
Shmulevich, I.8
Sander, C.9
Stuart, J.M.10
-
9
-
-
57149120304
-
Basing population genetic inferences and models of molecular evolution upon desired stationary distributions of DNA or protein sequences
-
Choi SC, Redelings BD, Thorne JL. 2008. Basing population genetic inferences and models of molecular evolution upon desired stationary distributions of DNA or protein sequences. Phil Trans R Soc B 363: 3931-3939.
-
(2008)
Phil Trans R Soc B
, vol.363
, pp. 3931-3939
-
-
Choi, S.C.1
Redelings, B.D.2
Thorne, J.L.3
-
10
-
-
73149123343
-
Genetic diagnosis bywhole exome capture and massively parallel DNA sequencing
-
Choi M, Scholl UI, Ji W, Liu T, Tikhonova IR, Zumbo P, Nayir A, Bakkaloglu A, Ozen S, Sanjad S, et al. 2009. Genetic diagnosis bywhole exome capture and massively parallel DNA sequencing. Proc Natl Acad Sci 106: 19096-19101.
-
(2009)
Proc Natl Acad Sci
, vol.106
, pp. 19096-19101
-
-
Choi, M.1
Scholl, U.I.2
Ji, W.3
Liu, T.4
Tikhonova, I.R.5
Zumbo, P.6
Nayir, A.7
Bakkaloglu, A.8
Ozen, S.9
Sanjad, S.10
-
11
-
-
69749122314
-
Identification of deleterious mutations within three human genomes
-
Chun S, Fay J. 2009. Identification of deleterious mutations within three human genomes. Genome Res 19: 1553.
-
(2009)
Genome Res
, vol.19
, pp. 1553
-
-
Chun, S.1
Fay, J.2
-
12
-
-
0032574346
-
The evolutionary genetics of speciation
-
Coyne JA, Orr HA. 1998. The evolutionary genetics of speciation. Phil Trans R Soc B 353: 287-305.
-
(1998)
Phil Trans R Soc B
, vol.353
, pp. 287-305
-
-
Coyne, J.A.1
Orr, H.A.2
-
13
-
-
77953067567
-
Do common in silico tools predict the clinical consequences of amino-acid substitutions in the CFTR gene?
-
Dorfman R, Nalpathamkalam T, Taylor C, Gonska T, Keenan K, Yuan X, Corey M, Tsui L, Zielenski J, Durie P. 2010. Do common in silico tools predict the clinical consequences of amino-acid substitutions in the CFTR gene? Clin Genet 77: 464-473.
-
(2010)
Clin Genet
, vol.77
, pp. 464-473
-
-
Dorfman, R.1
Nalpathamkalam, T.2
Taylor, C.3
Gonska, T.4
Keenan, K.5
Yuan, X.6
Corey, M.7
Tsui, L.8
Zielenski, J.9
Durie, P.10
-
14
-
-
3042666256
-
MUSCLE: Multiple sequence alignment with high accuracy and high throughput
-
Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32: 1792-1797.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
15
-
-
77649271360
-
Evolutionary trace annotation of protein function in the structural proteome
-
Erdin S, Ward R, Venner E, Lichtarge O. 2010. Evolutionary trace annotation of protein function in the structural proteome. J Mol Biol 396: 1451-1473.
-
(2010)
J Mol Biol
, vol.396
, pp. 1451-1473
-
-
Erdin, S.1
Ward, R.2
Venner, E.3
Lichtarge, O.4
-
16
-
-
34447546660
-
The distribution of fitness effects of new mutations
-
Eyre-Walker A, Keightley PD. 2007. The distribution of fitness effects of new mutations. Nat Rev Genet 8: 610-618.
-
(2007)
Nat Rev Genet
, vol.8
, pp. 610-618
-
-
Eyre-Walker, A.1
Keightley, P.D.2
-
19
-
-
0030574072
-
Compensatory nearly neutral mutations: Selection without adaptation
-
Hartl DL, Taubes CH. 1996. Compensatory nearly neutral mutations: selection without adaptation. J Theor Biol 182: 303-309.
-
(1996)
J Theor Biol
, vol.182
, pp. 303-309
-
-
Hartl, D.L.1
Taubes, C.H.2
-
20
-
-
0026458378
-
Amino acid substitutionmatrices from protein blocks
-
Henikoff S, Henikoff J. 1992. Amino acid substitutionmatrices from protein blocks. Proc Natl Acad Sci 89: 10915.
-
(1992)
Proc Natl Acad Sci
, vol.89
, pp. 10915
-
-
Henikoff, S.1
Henikoff, J.2
-
21
-
-
79957621519
-
Prediction of missense mutation functionality depends on both the algorithm and sequence alignment employed
-
Hicks S, Wheeler DA, Plon SE, Kimmel M. 2011. Prediction of missense mutation functionality depends on both the algorithm and sequence alignment employed. Hum Mutat 32: 661-668.
-
(2011)
Hum Mutat
, vol.32
, pp. 661-668
-
-
Hicks, S.1
Wheeler, D.A.2
Plon, S.E.3
Kimmel, M.4
-
22
-
-
0037816165
-
Understanding the function-structure and function-mutation relationships of p53 tumor suppressor protein by high-resolution missense mutation analysis
-
Kato S, Han S, Liu W, Otsuka K, Shibata H, Kanamaru R, Ishioka C. 2003. Understanding the function-structure and function-mutation relationships of p53 tumor suppressor protein by high-resolution missense mutation analysis. Proc Natl Acad Sci 100: 8424.
-
(2003)
Proc Natl Acad Sci
, vol.100
, pp. 8424
-
-
Kato, S.1
Han, S.2
Liu, W.3
Otsuka, K.4
Shibata, H.5
Kanamaru, R.6
Ishioka, C.7
-
23
-
-
84855455959
-
Rates and fitness consequences of new mutations in humans
-
Keightley PD. 2012. Rates and fitness consequences of new mutations in humans. Genetics 190: 295-304.
-
(2012)
Genetics
, vol.190
, pp. 295-304
-
-
Keightley, P.D.1
-
24
-
-
77953771357
-
Statistical potentials for improved structurally constrained evolutionary models
-
Kleinman CL, Rodrigue N, Lartillot N, Philippe H. 2010. Statistical potentials for improved structurally constrained evolutionary models. Mol Biol Evol 27: 1546-1560.
-
(2010)
Mol Biol Evol
, vol.27
, pp. 1546-1560
-
-
Kleinman, C.L.1
Rodrigue, N.2
Lartillot, N.3
Philippe, H.4
-
25
-
-
0028808763
-
Context-dependent optimal substitution matrices
-
Koshi JM, Goldstein RA. 1995. Context-dependent optimal substitution matrices. Protein Eng 8: 641-645.
-
(1995)
Protein Eng
, vol.8
, pp. 641-645
-
-
Koshi, J.M.1
Goldstein, R.A.2
-
26
-
-
47049105911
-
Update of the Pompe disease mutation database with 107 sequence variants and a format for severity rating
-
Kroos M, Pomponio RJ, van Vliet L, Palmer RE, Phipps M, Van der Helm R, Halley D, Reuser A. 2008. Update of the Pompe disease mutation database with 107 sequence variants and a format for severity rating. Hum Mutat 29: E13-E26.
-
(2008)
Hum Mutat
, vol.29
, pp. E13-E26
-
-
Kroos, M.1
Pomponio, R.J.2
Van Vliet, L.3
Palmer, R.E.4
Phipps, M.5
Van Der Helm, R.6
Halley, D.7
Reuser, A.8
-
27
-
-
0029913807
-
An evolutionary tracemethod defines binding surfaces common to protein families
-
Lichtarge O, Bourne H, Cohen F. 1996. An evolutionary tracemethod defines binding surfaces common to protein families. J Mol Biol 257: 342-358.
-
(1996)
J Mol Biol
, vol.257
, pp. 342-358
-
-
Lichtarge, O.1
Bourne, H.2
Cohen, F.3
-
28
-
-
0031555477
-
Identification of functional surfaces of the zinc binding domains of intracellular receptors
-
Lichtarge O, Yamamoto KR, Cohen FE. 1997. Identification of functional surfaces of the zinc binding domains of intracellular receptors. J Mol Biol 274: 325-337.
-
(1997)
J Mol Biol
, vol.274
, pp. 325-337
-
-
Lichtarge, O.1
Yamamoto, K.R.2
Cohen, F.E.3
-
29
-
-
0027764344
-
Proteinsequence alignments: A strategy for the hierarchical analysis of residue conservation
-
Livingstone CD, Barton GJ. 1993. Proteinsequence alignments: a strategy for the hierarchical analysis of residue conservation. Comput Appl Biosci 9: 745-756.
-
(1993)
Comput Appl Biosci
, vol.9
, pp. 745-756
-
-
Livingstone, C.D.1
Barton, G.J.2
-
30
-
-
0024406911
-
Complete mutagenesis of the HIV-1 protease
-
Loeb D, Swanstrom R, Everitt L, Manchester M, Stamper S, Hutchison C. 1989. Complete mutagenesis of the HIV-1 protease. Nature 340: 397-400.
-
(1989)
Nature
, vol.340
, pp. 397-400
-
-
Loeb, D.1
Swanstrom, R.2
Everitt, L.3
Manchester, M.4
Stamper, S.5
Hutchison, C.6
-
31
-
-
84873868572
-
Evolutionary biology for the 21st century
-
Losos JB, Arnold SJ, Bejerano G, Brodie E III, Hibbett D, Hoekstra HE, Mindell DP, Monteiro An, Moritz C, Orr HA. 2013. Evolutionary biology for the 21st century. PLoS Biol 11: e1001466.
-
(2013)
PLoS Biol
, vol.11
, pp. e1001466
-
-
Losos, J.B.1
Arnold, S.J.2
Bejerano, G.3
Brodie, E.4
Hibbett, D.5
Hoekstra, H.E.6
Mindell, D.P.7
Monteiro, A.8
Moritz, C.9
Orr, H.A.10
-
32
-
-
77950475726
-
Whole-genome sequencing in a patient with Charcot-Marie-Tooth neuropathy
-
Lupski JR, Reid JG, Gonzaga-Jauregui C, Rio Deiros D, Chen DCY, Nazareth L, Bainbridge M, Dinh H, Jing C, Wheeler DA. 2010. Whole-genome sequencing in a patient with Charcot-Marie-Tooth neuropathy. N Engl J Med 362: 1181-1191.
-
(2010)
N Engl J Med
, vol.362
, pp. 1181-1191
-
-
Lupski, J.R.1
Reid, J.G.2
Gonzaga-Jauregui, C.3
Rio Deiros, D.4
Chen, D.C.Y.5
Nazareth, L.6
Bainbridge, M.7
Dinh, H.8
Jing, C.9
Wheeler, D.A.10
-
33
-
-
0036300444
-
Structural clusters of evolutionary trace residues are statistically significant and common in proteins
-
Madabushi S, Yao H, Marsh M, Kristensen DM, Philippi A, Sowa ME, Lichtarge O. 2002. Structural clusters of evolutionary trace residues are statistically significant and common in proteins. J Mol Biol 316: 139-154.
-
(2002)
J Mol Biol
, vol.316
, pp. 139-154
-
-
Madabushi, S.1
Yao, H.2
Marsh, M.3
Kristensen, D.M.4
Philippi, A.5
Sowa, M.E.6
Lichtarge, O.7
-
34
-
-
1542379652
-
Evolutionary trace of G protein-coupled receptors reveals clusters of residues that determine global and class-specific functions
-
Madabushi S, Gross AK, Philippi A, Meng EC, Wensel TG, Lichtarge O. 2004. Evolutionary trace of G protein-coupled receptors reveals clusters of residues that determine global and class-specific functions. J Biol Chem 279: 8126-8132.
-
(2004)
J Biol Chem
, vol.279
, pp. 8126-8132
-
-
Madabushi, S.1
Gross, A.K.2
Philippi, A.3
Meng, E.C.4
Wensel, T.G.5
Lichtarge, O.6
-
35
-
-
0028076771
-
Genetic studies of the lac repressor. XIV. Analysis of 4000 altered Escherichia coli lac repressors reveals essential and non-essential residues, as well as "spacers" which do not require a specific sequence
-
Markiewicz P, Kleina L, Cruz C, Ehret S, Miller J. 1994. Genetic studies of the lac repressor. XIV. Analysis of 4000 altered Escherichia coli lac repressors reveals essential and non-essential residues, as well as "spacers" which do not require a specific sequence. J Mol Biol 240: 421.
-
(1994)
J Mol Biol
, vol.240
, pp. 421
-
-
Markiewicz, P.1
Kleina, L.2
Cruz, C.3
Ehret, S.4
Miller, J.5
-
36
-
-
84859595320
-
Surrogate genetics and metabolic profiling for characterization of human disease alleles
-
Mayfield JA, Davies MW, Dimster-Denk D, Pleskac N, McCarthy S, Boydston EA, Fink L, Lin XX, Narain AS, Meighan M, et al. 2012. Surrogate genetics and metabolic profiling for characterization of human disease alleles. Genetics 190: 1309-1323.
-
(2012)
Genetics
, vol.190
, pp. 1309-1323
-
-
Mayfield, J.A.1
Davies, M.W.2
Dimster-Denk, D.3
Pleskac, N.4
McCarthy, S.5
Boydston, E.A.6
Fink, L.7
Lin, X.X.8
Narain, A.S.9
Meighan, M.10
-
37
-
-
58149347486
-
Genome-wide association studies: Potential next steps on a genetic journey
-
McCarthy MI, Hirschhorn JN. 2008. Genome-wide association studies: potential next steps on a genetic journey. Hum Mol Genet 17: R156-R165.
-
(2008)
Hum Mol Genet
, vol.17
, pp. R156-R165
-
-
McCarthy, M.I.1
Hirschhorn, J.N.2
-
38
-
-
1242339659
-
A family of evolution-entropy hybrid methods for ranking protein residues by importance
-
Mihalek I, Res I, Lichtarge O. 2004. A family of evolution-entropy hybrid methods for ranking protein residues by importance. J Mol Biol 336: 1265-1282.
-
(2004)
J Mol Biol
, vol.336
, pp. 1265-1282
-
-
Mihalek, I.1
Res, I.2
Lichtarge, O.3
-
39
-
-
34547616501
-
The new mutation theory of phenotypic evolution
-
Nei M. 2007. The new mutation theory of phenotypic evolution. Proc Natl Acad Sci 104: 12235-12242.
-
(2007)
Proc Natl Acad Sci
, vol.104
, pp. 12235-12242
-
-
Nei, M.1
-
40
-
-
0035026704
-
Predicting deleterious amino acid substitutions
-
Ng P, Henikoff S. 2001. Predicting deleterious amino acid substitutions. Genome Res 11: 863.
-
(2001)
Genome Res
, vol.11
, pp. 863
-
-
Ng, P.1
Henikoff, S.2
-
41
-
-
50849127837
-
Genetic variation in an individual human exome
-
Ng PC, Levy S, Huang J, Stockwell TB, Walenz BP, Li K, Axelrod N, Busam DA, Strausberg RL, Venter JC. 2008. Genetic variation in an individual human exome. PLoS Genet 4: e1000160.
-
(2008)
PLoS Genet
, vol.4
, pp. e1000160
-
-
Ng, P.C.1
Levy, S.2
Huang, J.3
Stockwell, T.B.4
Walenz, B.P.5
Li, K.6
Axelrod, N.7
Busam, D.A.8
Strausberg, R.L.9
Venter, J.C.10
-
42
-
-
0027020232
-
The nearly neutral theory of molecular evolution
-
Ohta T. 1992. The nearly neutral theory of molecular evolution. Annu Rev Ecol Syst 23: 263-286.
-
(1992)
Annu Rev Ecol Syst
, vol.23
, pp. 263-286
-
-
Ohta, T.1
-
43
-
-
13144257707
-
The genetic theory of adaptation: A brief history
-
Orr HA. 2005. The genetic theory of adaptation: a brief history. Nat Rev Genet 6: 119-127.
-
(2005)
Nat Rev Genet
, vol.6
, pp. 119-127
-
-
Orr, H.A.1
-
44
-
-
0027062943
-
Environment-specific amino acid substitution tables: Tertiary templates and prediction of protein folds
-
Overington J, Donnelly D, Johnson MS, Sali A, Blundell TL. 1992. Environment-specific amino acid substitution tables: tertiary templates and prediction of protein folds. Protein Sci 1: 216-226.
-
(1992)
Protein Sci
, vol.1
, pp. 216-226
-
-
Overington, J.1
Donnelly, D.2
Johnson, M.S.3
Sali, A.4
Blundell, T.L.5
-
45
-
-
0034843597
-
AL2CO: Calculation of positional conservation in a protein sequence alignment
-
Pei J, Grishin NV. 2001. AL2CO: calculation of positional conservation in a protein sequence alignment. Bioinformatics 17: 700-712.
-
(2001)
Bioinformatics
, vol.17
, pp. 700-712
-
-
Pei, J.1
Grishin, N.V.2
-
46
-
-
34248379012
-
Impact of mutant p53 functional properties on TP53 mutation patterns and tumor phenotype: Lessons from recent developments in the IARC TP53 database
-
Petitjean A, Mathe E, Kato S, Ishioka C, Tavtigian S, Hainaut P, Olivier M. 2007. Impact of mutant p53 functional properties on TP53 mutation patterns and tumor phenotype: lessons from recent developments in the IARC TP53 database. Hum Mutat 28: 622-629.
-
(2007)
Hum Mutat
, vol.28
, pp. 622-629
-
-
Petitjean, A.1
Mathe, E.2
Kato, S.3
Ishioka, C.4
Tavtigian, S.5
Hainaut, P.6
Olivier, M.7
-
48
-
-
77952356281
-
Evolution-guided discovery and recoding of allosteric pathway specificity determinants in psychoactive bioamine receptors
-
Rodriguez G, Yao R, Lichtarge O, Wensel T. 2010. Evolution-guided discovery and recoding of allosteric pathway specificity determinants in psychoactive bioamine receptors. Proc Natl Acad Sci 107: 7787.
-
(2010)
Proc Natl Acad Sci
, vol.107
, pp. 7787
-
-
Rodriguez, G.1
Yao, R.2
Lichtarge, O.3
Wensel, T.4
-
49
-
-
84868159034
-
Two mechanisms produce mutation hotspots at DNA breaks in Escherichia coli
-
Shee C, Gibson JL, Rosenberg SM. 2012. Two mechanisms produce mutation hotspots at DNA breaks in Escherichia coli. Cell Rep 2: 714-721.
-
(2012)
Cell Rep
, vol.2
, pp. 714-721
-
-
Shee, C.1
Gibson, J.L.2
Rosenberg, S.M.3
-
50
-
-
0014935646
-
Natural selection and the concept of a protein space
-
Smith JM 1970. Natural selection and the concept of a protein space. Nature 225: 563-564
-
(1970)
Nature
, vol.225
, pp. 563-564
-
-
Smith, J.M.1
-
51
-
-
0346220017
-
Dimerization in aminergic G-protein-coupled receptors: Application of a hidden-site class model of evolution
-
Soyer OS, Dimmic MW, Neubig RR, Goldstein RA. 2003. Dimerization in aminergic G-protein-coupled receptors: application of a hidden-site class model of evolution. Biochemistry 42: 14522-14531.
-
(2003)
Biochemistry
, vol.42
, pp. 14522-14531
-
-
Soyer, O.S.1
Dimmic, M.W.2
Neubig, R.R.3
Goldstein, R.A.4
-
52
-
-
22244437614
-
Physicochemical constraint violation by missense substitutions mediates impairment of protein function and disease severity
-
Stone E, Sidow A. 2005. Physicochemical constraint violation by missense substitutions mediates impairment of protein function and disease severity. Genome Res 15: 978-986.
-
(2005)
Genome Res
, vol.15
, pp. 978-986
-
-
Stone, E.1
Sidow, A.2
-
53
-
-
34347388470
-
UniRef: Comprehensive and non-redundant UniProt reference clusters
-
Suzek BE, Huang H, McGarvey P, Mazumder R, Wu CH. 2007. UniRef: comprehensive and non-redundant UniProt reference clusters. Bioinformatics 23: 1282-1288.
-
(2007)
Bioinformatics
, vol.23
, pp. 1282-1288
-
-
Suzek, B.E.1
Huang, H.2
McGarvey, P.3
Mazumder, R.4
Wu, C.H.5
-
54
-
-
0036681416
-
Scoring residue conservation
-
Valdar WS. 2002. Scoring residue conservation. Proteins 48: 227-241.
-
(2002)
Proteins
, vol.48
, pp. 227-241
-
-
Valdar, W.S.1
-
55
-
-
65649110443
-
Evolutionary Trace Annotation Server: Automated enzyme function prediction in protein structures using 3D templates
-
Ward RM, Venner E, Daines B, Murray S, Erdin S, Kristensen DM, Lichtarge O. 2009. Evolutionary Trace Annotation Server: automated enzyme function prediction in protein structures using 3D templates. Bioinformatics 25: 1426-1427.
-
(2009)
Bioinformatics
, vol.25
, pp. 1426-1427
-
-
Ward, R.M.1
Venner, E.2
Daines, B.3
Murray, S.4
Erdin, S.5
Kristensen, D.M.6
Lichtarge, O.7
-
56
-
-
84886063889
-
Accounting for epistatic interactions improves the functional analysis of protein structures
-
Wilkins AD, Venner E, Marciano DC, Erdin S, Atri B, Lua RC, Lichtarge O. 2013. Accounting for epistatic interactions improves the functional analysis of protein structures. Bioinformatics 29: 2714-2721.
-
(2013)
Bioinformatics
, vol.29
, pp. 2714-2721
-
-
Wilkins, A.D.1
Venner, E.2
Marciano, D.C.3
Erdin, S.4
Atri, B.5
Lua, R.C.6
Lichtarge, O.7
-
57
-
-
0000907353
-
The roles of mutation, inbreeding, crossbreeding, and selection in evolution
-
Genetics Society of America, Ithaca, NY
-
Wright, S. 1932. The roles of mutation, inbreeding, crossbreeding, and selection in evolution. In Proceedings of the 6th International Congress of Genetics, Vol. 1, pp. 356-366. Genetics Society of America, Ithaca, NY.
-
(1932)
Proceedings of the 6th International Congress of Genetics
, vol.1
, pp. 356-366
-
-
Wright, S.1
-
58
-
-
0037423759
-
An accurate, sensitive, and scalable method to identify functional sites in protein structures
-
Yao H, Kristensen D, Mihalek I, Sowa M, Shaw C, Kimmel M, Kavraki L, Lichtarge O. 2003. An accurate, sensitive, and scalable method to identify functional sites in protein structures. J Mol Biol 326: 255-261.
-
(2003)
J Mol Biol
, vol.326
, pp. 255-261
-
-
Yao, H.1
Kristensen, D.2
Mihalek, I.3
Sowa, M.4
Shaw, C.5
Kimmel, M.6
Kavraki, L.7
Lichtarge, O.8
-
59
-
-
33748267918
-
Rank information: A structure-independent measure of evolutionary trace quality that improves identification of protein functional sites
-
Yao H, Mihalek I, Lichtarge O. 2006. Rank information: a structure-independent measure of evolutionary trace quality that improves identification of protein functional sites. Proteins 65: 111-123.
-
(2006)
Proteins
, vol.65
, pp. 111-123
-
-
Yao, H.1
Mihalek, I.2
Lichtarge, O.3
|