SRR1 is essential to repress flowering in non-inductive conditions in Arabidopsis thaliana

Journal of Experimental Botany

Volumn 65, Issue 20, 2014, Pages 5811-5822

  Johansson, Mikael ^a   Staiger, Dorothee ^a  

^a BIELEFELD UNIVERSITY   (Germany)

Author keywords

Arabidopsis; circadian clock; flowering time control; photoperiod; repressors; SRR1

Indexed keywords

ARABIDOPSIS; ARABIDOPSIS THALIANA;

ARABIDOPSIS PROTEIN; SRR1 PROTEIN, ARABIDOPSIS;

ARABIDOPSIS; CIRCADIAN RHYTHM; FLOWER; GENE EXPRESSION REGULATION; GENETICS; LIGHT; METABOLISM; MUTATION; PHENOTYPE; PHOTOPERIODICITY; PHYSIOLOGY; RADIATION RESPONSE; REPRODUCTION; SIGNAL TRANSDUCTION; TIME; TRANSGENIC PLANT;

ARABIDOPSIS; ARABIDOPSIS PROTEINS; CIRCADIAN CLOCKS; FLOWERS; GENE EXPRESSION REGULATION, PLANT; LIGHT; MUTATION; PHENOTYPE; PHOTOPERIOD; PLANTS, GENETICALLY MODIFIED; REPRODUCTION; SIGNAL TRANSDUCTION; TIME FACTORS;

EID: 84913570412     PISSN: 00220957     EISSN: 14602431     Source Type: Journal    
DOI: 10.1093/jxb/eru317     Document Type: Article

References (60)

1. Abe M, Kobayashi Y, Yamamoto S, Daimon Y, Yamaguchi A, Ikeda Y, Ichinoki H, Notaguchi M, Goto K, Araki T. 2005. FD, a bZIP protein mediating signals from the floral pathway integrator FT at the shoot apex. Science 309, 1052-1056.
2. Alabadi D, Yanovsky MJ, Má s P, Harmer SL, Kay SA. 2002. Critical role for CCA1 and LHY in maintaining circadian rhythmicity in Arabidopsis. Current Biology 12, 757-761.
3. Alexandre CM, Hennig L. 2008. FLC or not FLC: the other side of vernalization. Journal of Experimental Botany 59, 1127-1135.
4. Amasino R. 2010. Seasonal and developmental timing of flowering. The Plant Journal 61, 1001-1013.
5. André s F, Coupland G. 2012. The genetic basis of flowering responses to seasonal cues. Nature Reviews Genetics 13, 627-639.
6. Balasubramanian S, Sureshkumar S, Lempe J, Weigel D. 2006. Potent induction of Arabidopsis thaliana flowering by elevated growth temperature. PLoS Genetics 2, e106.
7. Blazquez MA, Ahn JH, Weigel D. 2003. A thermosensory pathway controlling flowering time in Arabidopsis thaliana. Nature Genetics 33, 168-171.
8. Brachi B, Faure N, Horton M, Flahauw E, Vazquez A, Nordborg M, Bergelson J, Cuguen J, Roux F. 2010. Linkage and association mapping of Arabidopsis thaliana flowering time in nature. PLoS Genetics 6, e1000940.
9. Castillejo C, Pelaz S. 2008. The balance between CONSTANS and TEMPRANILLO activities determines FT expression to trigger flowering. Current Biology 18, 1338-1343.
10. Corbesier L, Gadisseur I, Silvestre G, Jacqmard A, Bernier G. 1996. Design in Arabidopsis thaliana of a synchronous system of floral induction by one long day. The Plant Journal 9, 947-952.
11. Ed wards KD, Anderson PE, Hall A, Salathia NS, Locke JC, Lynn JR, Straume M, Smith JQ, Millar AJ. 2006. FLOWERING LOCUS C mediates natural variation in the high-temperature response of the Arabidopsis circadian clock. The Plant Cell 18, 639-650.
12. Fiechter V, Cameroni E, Cerutti L, Virgilio C, Barral Y, Fankhauser C. 2008. The evolutionary conserved BER1 gene is involved in microtubule stability in yeast. Current Genetics 53, 107-115.
13. Fornara F, Panigrahi KC, Gissot L, Suaerbrunn N, Rühl M, Jarillo JA, Coupland G. 2009. Arabidopsis DOF transcription factors act redundantly to reduce CONSTANS expre ssion and are essential for a photoperiodic flowering response. Developmental Cell 17, 75-86.
14. Fowler S, Lee K, Onouchi H, Samach A, Richardson K, Morris B, Coupland G, Putterill J. 1999. GIGANTEA: a circadian clock-controlled gene that regulates photoperiodic flowering in Arabidopsis and encodes a protein with several possible membrane-spanning domains. EMBO Journal 18, 4679-4688.
15. Halliday KJ, Salter M G, Thingnaes E, Whitelam GC. 2003. Phytochrome control of flowering is temperature sensitive and correlates with expression of the floral integrator FT. The Plant Journal 33, 875-885.
16. Helliwell CA, Wood CC, Robertson M, James Peacock W, Dennis ES. 2006. The Arabidopsis FLC protein interacts directly in vivo with SOC1 and FT chromatin and is part of a high-molecular-weight protein complex. The Plant Journal 46, 183-1 92.
17. Herrero E, Kolmos E, Bujdoso N, et al. 2012. EARLY FLOWERING4 recruitment of EARLY FLOWERING3 in the nucleus sustains the Arabidopsis circadian clock. The Plant Cell 24, 428-443.
18. Imaizumi T, Schultz TF, Harmon FG, Ho LA, Kay SA. 2005. FKF1 F-box protein mediates cyclic degradation of a repressor of CONSTANS in Arabidopsis. Science 309, 293-297.
19. Jaeger KE Wigge PA. 2007 FT protein acts as a long-range signal in Arabidopsis Current Biology 17 1050-1054.
20. Jung J, Seo Y, Seo PJ, Reyes JL, Yun J, Chua NH, Park CM. 2007. The GIGANTEA-regulate d microRNA172 mediates photoperiodic flowering independent of CONSTANS in Arabidopsis. The Plant Cell 19, 2736-2748.
21. Kim D, Doyle MR, Sung S, Amasino RM. 2009. Vernalization: winter and the timing of flowering in plants. Annual Review of Cell and Developmental Biology 25, 277-299.
22. Kim W, Hicks KA, Somers DE. 2005. Independent roles for EARLY FLOWERING 3 and ZEITLUPE in the control of circadian timing, hyp ocotyl length, and flowering time. Plant Physiology 139, 1557-1569.
23. Kolmos E, Nowak M, Werner M, Fischer K, Schwarz G, Mathews S, Schoof H, Nagy F, Bujnicki JM, Davis SJ. 2009. Integrating ELF4 into th e circadian system through combined structural and functional studies. HFSP Journal 3, 350-366.
24. Lee JH, Ryu H, Chung KS, Posé D, Kim S, Schmid M, Ahn JH. 2013. Regulation of temperature-res ponsive flowering by MADS-box transcription factor repressors. Science 342, 628-632.
25. Lee JH, Yoo SJ, Park SH, Hwang I, Lee JS, Ahn JH. 2007. Role of SVP in the control of flowering time by ambient temperature in Arabidopsis. Genes and Development 21, 397-402.
26. Locke JC, Kozma-Bognar L, Gould PD, Fehér B, Kevei E, Nagy F, Turner MS, Hall A, Millar AJ. 2006. Experimental validation of a predicted feedback loop in the multi-oscillator clock of Arabidopsis thaliana. Molecular Systems Biology 2, 59.
27. Mathieu J, Warthma nn N, Küttner F, Schmid M. 2007. Export of FT protein from phloem companion cells is sufficient for floral induction in Arabidopsis. Current Biology 17, 1055-1060.
28. Matsushika A, Makino S, Kojima M, Mizuno T. 2000. Circadian waves of expression of the APRR1/TOC1 family of pseudo-response regulators in Arabidopsis thaliana: insight into the plant circadian clock. Plant and Cell Physiology 41, 1002-1012.
29. McC lung CR. 2011. The genetics of plant clocks. Advances in Genetics 74, 105-139.
30. Nusinow DA, Helfer A, Hamilton EE, King JJ, Imaizumi T, Schultz TF, Farré EM, Kay SA. 2011. The ELF4- ELF3-LUX complex links the circadian clock to diurnal control of hypocotyl growth. Nature 475, 398-402.
31. Osnato M, Castillejo C, Mat ías-Hernández L, Pelaz S. 2012. TEMPRANILLO genes link photoperiod and gibberellin pathways to control flowering in Arabidopsis. Nature Communications 3, 808.
32. Pfaffl MW. 2001. A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Research 29, e45.
33. Pokhilko A, Hodge SK, Stratford K, Knox K, Edwards KD, Thomson AW, Mizuno T, Millar AJ. 2010. Data assimilation constrains new connections and components in a complex, eukaryotic circadian clock mo del. Molecular Systems Biology 6, 416.
34. Porri A, Torti S, Romera-Branchat M, Coupland G. 2012. Spatially distinct regulatory roles for gibberellins in the promotion of flowering of Arabidopsis under long pho toperiods. Development 139, 2198-2209.
35. Pose D, Verhage L, Ott F, Mathieu J, Angenent GC, Immink RG, Schmid M. 2013. Temperature-dependent regulation of flowering by antagonistic FLM variants. Na ture 503, 414-417.
36. Putterill J, Robson F, Lee K, Simon R, Coupland G. 1995. The Constans gene of Arabidopsis promotes flowering and encodes a protein showing similarities to zinc-finger transcription fac tors. Cell 80, 847-857.
37. Reeves PH, Coupland G. 2001. Analysis of flowering time control in Arabidopsis by comparison of double and triple mutants. Plant Physiology 126, 1085-1091.
38. Sawa M, Kay SA. 2011. GIGANTEA directly activates flowering locus T in Arabidopsis thaliana. Proceedings of the National Academy of Sciences, USA 108, 11698-11703.
39. Sawa M, Nusinow DA, Kay SA, Imaizumi T. 2007. FKF1 and GIGANTEA complex formation is required for day-length measurement in Arabidopsis. Science 318, 261-265.
40. Schaffer R, Ramsay N, Sama ch A, Corden S, Putterill J, Carré IA, Coupland G. 1998. The late elongated hypocotyl mutation of Arabidopsis disrupts circadian rhythms and the photoperiodic control of flowering. Cell 93, 1219-1229.
41. Searle I He Y Turck F Vincent C Fornara F Krö ber S Amasino RA Coupland G. 2006 The transcription factor FLC confers a flowering response to vernalization by repressing meristem competence and systemic signali ng in Arabidopsis Genes and Development 20 898-912.
42. Sgamma T, Jackson A, Muleo R, Thomas B, Massiah A. 2014. TEMPRANILLO is a regulator of juvenility in plants. Scientific Reports 4, 3704.
43. Somers DE, Webb AA, Pearson M, Kay SA. 1998. The short-period mutant, toc1-1, alters circadian clock regulation of multiple outputs throughout development in Arabidopsis thaliana. Development 125, 48 5-494.
44. Song YH, Smith RW, To BJ, Millar AJ, Imaizumi T. 2012. FKF1 conveys timing information for CONSTANS stabilization in photoperiodic flowering. Science 336, 1045-1049.
45. Srikanth A, Schmid M. 2011. Regulation of flowering time: all roads lead to Rome. Cellular and Molecular Life Sciences 68, 2013-2037.
46. Staiger D, Allenbach L, Salathia N, Fiechter V, Davis SJ, Millar AJ, Chory J, Fankhauser C. 2003. The Arabidopsis SRR1 gene mediates phyB signaling and is required for normal circadian clock function. Genes and Development 17, 256-268.
47. Staiger D, Shin J, Johansson M, Davis SJ. 2013. The circadian clock goes genomic. Genome Biology 14, 208.
48. Steffen A, Fischer A, Staiger D. 2014. Determination of photoperiodic flowering time control Arabidopsis and barley. Methods in Molecular Biology 1158, 285-295.
49. Strayer C, Oyama T, Schultz T, Raman R, Somers DE, Más P, Panda S, Kreps JA, Kay SA. 2000. Cloning of the Arabidopsis clock gene TOC1, an autoregulatory r esponse regulator homolog. Science 289, 768-771.
50. Streitner C, Danisman S, Wehrle F, Schoning JC, Alfano JR, Staiger D. 2008. The small glycine-rich RNA binding protein AtGRP7 promotes floral tra nsition in Arabidopsis thaliana. The Plant Journal 56, 239-250.
51. Streitner C, Koster T, Simpson CG, Shaw P, Danisman S, Brown JW, Staiger D. 2012. An hnRNP-like RNA-binding protein affects a lternative splicing by in vivo interaction with transcripts in Arabidopsis thaliana. Nucleic Acids Research 40, 11240-11255.
52. Suarez-Lopez P, Wheatley K, Robson F, Onouchi H, Valverde F, Coupland G. 2001. CONSTANS mediates between the circadian clock and the control of flowering in Arabidopsis. Nature 410, 1116-1120.
53. Valverde F, Mouradov A, Soppe W, Ravenscroft D, Samach A, Coupland G. 2004. Photoreceptor regulation of CONSTANS protein in photoperiodic flowering. Science 303, 1003-1006.
54. Wang ZY, Kenigsbuch D, Sun L, Harel E, Ong MS, Tobin EM. 1997. A Myb-related transcription factor is involved in the phytochrome regulation of an Arabidopsis Lhcb gene. The Plant Cell 9, 491-507.
55. Wang ZY, Tobin EM. 1998. Constitutive expression of the CIRCADIAN CLOCK ASSOCIATED 1 (CCA1) gene disrupts circadian rhythms and suppresses its own expression. Cell 93, 1207-1217.
56. Wigge PA. 2005. Integration of s patial and temporal information during floral induction in Arabidopsis. Science 309, 1056-1059.
57. Wilson RN, Heckman JW, Somerville CR. 1992. Gibberellin is required for flowering in Arabidopsis thaliana under short days. Plant Physiology 100, 403-408.
58. Xiao D, Zhao JJ, Hou XL, et al. 2013. The Brassica rapa FLC homologue FLC2 is a key regulator of flowering time, identified through transcriptional co-expression networks. Journal of Experimental Botany 64, 4503-4516.
59. Yant L, Mathieu J, Schmid M. 2009. Just say no: floral repressors help Arabidopsis bide the time. Current Opinion in Plant Biology 12, 580-586.
60. Zeilinger MN, Farré EM, Taylor SR, Kay SA, Doyle FJ3. 2006. A novel computational model of the circadian clock in Arabidopsis that incorporates PRR7 and PRR9. Molecular Systems Biology 2, 58.