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Volumn 21, Issue 24, 2014, Pages 13974-13978

Isolation and characterization of a Pseudomonas aeruginosa from a virgin Brazilian Amazon region with potential to degrade atrazine

Author keywords

Atrazine; Brazilian Amazon Forest; Pseudomonas aeruginosa

Indexed keywords

ATRAZINE; GENETIC STRUCTURE; GENETIC VARIATION; MICROBIAL ACTIVITY; MINERALIZATION; PESTICIDE APPLICATION; RAINFOREST;

EID: 84911811890     PISSN: 09441344     EISSN: 16147499     Source Type: Journal    
DOI: 10.1007/s11356-014-3316-7     Document Type: Article
Times cited : (30)

References (32)
  • 1
    • 79960941366 scopus 로고    scopus 로고
    • Determination of atrazine and degradation products in Luxembourgish drinking water: origin and fate of potential endocrine-disrupting pesticides
    • COI: 1:CAS:528:DC%2BC3MXpsVWqu7k%3D
    • Bohn T, Cocco E, Gourdol L, Guignard C, Hoffmann L (2011) Determination of atrazine and degradation products in Luxembourgish drinking water: origin and fate of potential endocrine-disrupting pesticides. Food Addit Contam Part A 28:1041–1054
    • (2011) Food Addit Contam Part A , vol.28 , pp. 1041-1054
    • Bohn, T.1    Cocco, E.2    Gourdol, L.3    Guignard, C.4    Hoffmann, L.5
  • 2
    • 0031745940 scopus 로고    scopus 로고
    • The atzABC genes encoding atrazine catabolism genes are located on a self-transmissible plasmid in Pseudomonas strain ADP
    • de Souza ML, Wackett LP, Sadowsky MJ (1998a) The atzABC genes encoding atrazine catabolism genes are located on a self-transmissible plasmid in Pseudomonas strain ADP. Appl Environ Microbiol 64:2323–2326
    • (1998) Appl Environ Microbiol , vol.64 , pp. 2323-2326
    • de Souza, M.L.1    Wackett, L.P.2    Sadowsky, M.J.3
  • 5
    • 0030732527 scopus 로고    scopus 로고
    • Analysis of epidemic Pseudomonas aeruginosa isolates by isoeletric focusing of pyoverdine and RAPD-PCR: modern tools for an integrated anti-nosocomial infection strategy in burn wound centers
    • De Vos D, Lim A Jr, Pirnay JP, Duinslaeger L, Revets H, Vanderkelen A, Hamers R, Cornelis P (1997) Analysis of epidemic Pseudomonas aeruginosa isolates by isoeletric focusing of pyoverdine and RAPD-PCR: modern tools for an integrated anti-nosocomial infection strategy in burn wound centers. Burns 23:379–386
    • (1997) Burns , vol.23 , pp. 379-386
    • De Vos, D.1    Lim, A.2    Pirnay, J.P.3    Duinslaeger, L.4    Revets, H.5    Vanderkelen, A.6    Hamers, R.7    Cornelis, P.8
  • 6
    • 0347990402 scopus 로고    scopus 로고
    • Real-time reverse transcription PCR analysis of expression of atrazine catabolism genes in two bacterial strains isolated from soil
    • COI: 1:CAS:528:DC%2BD2cXoslWn
    • Devers M, Soulas G, Martin-Laurent F (2004) Real-time reverse transcription PCR analysis of expression of atrazine catabolism genes in two bacterial strains isolated from soil. J Microbiol Methods 56:3–15
    • (2004) J Microbiol Methods , vol.56 , pp. 3-15
    • Devers, M.1    Soulas, G.2    Martin-Laurent, F.3
  • 7
    • 0026060887 scopus 로고
    • Cloning and comparison of the DNA encoding ammelide aminohydrolase and cyanuric acid amidohydrolase from three s-triazine-degrading bacterial strains
    • COI: 1:CAS:528:DyaK3MXhsl2itrw%3D
    • Eaton RW, Karns JS (1991) Cloning and comparison of the DNA encoding ammelide aminohydrolase and cyanuric acid amidohydrolase from three s-triazine-degrading bacterial strains. J Bacteriol 173:1363–1366
    • (1991) J Bacteriol , vol.173 , pp. 1363-1366
    • Eaton, R.W.1    Karns, J.S.2
  • 8
    • 79960389334 scopus 로고    scopus 로고
    • The impact of the herbicide atrazine on growth and photosynthesis of seagrass, Zostera marina (L.), seedlings
    • COI: 1:CAS:528:DC%2BC3MXovFKrt7Y%3D
    • Gao Y, Fang J, Zhang J, Ren L, Mao Y, Li B et al (2011) The impact of the herbicide atrazine on growth and photosynthesis of seagrass, Zostera marina (L.), seedlings. Mar Pollut Bull 62:1628–1631
    • (2011) Mar Pollut Bull , vol.62 , pp. 1628-1631
    • Gao, Y.1    Fang, J.2    Zhang, J.3    Ren, L.4    Mao, Y.5    Li, B.6
  • 9
    • 84875276569 scopus 로고    scopus 로고
    • Under- and over-use of pesticides: an international analysis
    • Ghimire N, Woodward RT (2013) Under- and over-use of pesticides: an international analysis. Ecol Econ 89:73–81
    • (2013) Ecol Econ , vol.89 , pp. 73-81
    • Ghimire, N.1    Woodward, R.T.2
  • 10
    • 49749118721 scopus 로고    scopus 로고
    • Isolation and characterization of a novel simazine-degrading bacterium from agricultural soil of central Chile, Pseudomonas sp. MHP41
    • Hernández M, Villalobos P, Morgante V, González M, Reiff C, Moore E et al (2008) Isolation and characterization of a novel simazine-degrading bacterium from agricultural soil of central Chile, Pseudomonas sp. MHP41. FEMS Microbiol Lett 286:184–190
    • (2008) FEMS Microbiol Lett , vol.286 , pp. 184-190
    • Hernández, M.1    Villalobos, P.2    Morgante, V.3    González, M.4    Reiff, C.5    Moore, E.6
  • 11
    • 0032792079 scopus 로고    scopus 로고
    • Gene sequence and properties of an s-triazine ring-cleavage enzyme from Pseudomonas sp. strain NRRLB-12227
    • COI: 1:CAS:528:DyaK1MXltVOlsbs%3D
    • Karns JS (1999) Gene sequence and properties of an s-triazine ring-cleavage enzyme from Pseudomonas sp. strain NRRLB-12227. Appl Environ Microbiol 65:3512–3517
    • (1999) Appl Environ Microbiol , vol.65 , pp. 3512-3517
    • Karns, J.S.1
  • 12
    • 0017980782 scopus 로고
    • A multiple plasmid-containing E. coli strain: convenient source of size reference plasmid molecules
    • Macrina FL, Kopecko DJ, Jones KR, Ayers DJ, McCowen SM (1987) A multiple plasmid-containing E. coli strain: convenient source of size reference plasmid molecules. Plasmid 1:417–420
    • (1987) Plasmid , vol.1 , pp. 417-420
    • Macrina, F.L.1    Kopecko, D.J.2    Jones, K.R.3    Ayers, D.J.4    McCowen, S.M.5
  • 13
    • 0028922453 scopus 로고
    • Isolation and characterization of a Pseudomonas aeruginosa sp. that mineralizes the s-triazine herbicide atrazine
    • COI: 1:CAS:528:DyaK2MXksl2lsLk%3D
    • Mandelbaum RT, Allan DL, Wackett LP (1995) Isolation and characterization of a Pseudomonas aeruginosa sp. that mineralizes the s-triazine herbicide atrazine. Appl Environ Microbiol 61:1451–1457
    • (1995) Appl Environ Microbiol , vol.61 , pp. 1451-1457
    • Mandelbaum, R.T.1    Allan, D.L.2    Wackett, L.P.3
  • 14
    • 84875064937 scopus 로고    scopus 로고
    • Drinking-water exposure to a mixture of nitrate and low-dose atrazine metabolites and small-for-gestational age (SGA) babies: a historic cohort study
    • COI: 1:CAS:528:DC%2BC3sXht1OmsL4%3D
    • Migeot V, Albouy-Llaty M, Carles C, Limousi F, Strezlec S, Dupuis A et al (2013) Drinking-water exposure to a mixture of nitrate and low-dose atrazine metabolites and small-for-gestational age (SGA) babies: a historic cohort study. Environ Res 122:58–64
    • (2013) Environ Res , vol.122 , pp. 58-64
    • Migeot, V.1    Albouy-Llaty, M.2    Carles, C.3    Limousi, F.4    Strezlec, S.5    Dupuis, A.6
  • 15
    • 79952193108 scopus 로고    scopus 로고
    • Isolation of a Pseudomonas aeruginosa strain from soil that can degrade polyurethane diol
    • COI: 1:CAS:528:DC%2BC3MXisFCgtbY%3D
    • Mukherjee K, Tribedi P, Chowdhury A, Ray T, Joardar A, Giri S et al (2011) Isolation of a Pseudomonas aeruginosa strain from soil that can degrade polyurethane diol. Biodegradation 22:377–388
    • (2011) Biodegradation , vol.22 , pp. 377-388
    • Mukherjee, K.1    Tribedi, P.2    Chowdhury, A.3    Ray, T.4    Joardar, A.5    Giri, S.6
  • 16
    • 0037005990 scopus 로고    scopus 로고
    • The triazine hydrolase gene trzN from Nocardioides sp. strain C190: cloning and construction of gene-specific primers
    • COI: 1:CAS:528:DC%2BD38XitFahsA%3D%3D
    • Mulbry WW, Zhu H, Nour SM, Topp E (2002) The triazine hydrolase gene trzN from Nocardioides sp. strain C190: cloning and construction of gene-specific primers. FEMS Microbiol Lett 206:75–79
    • (2002) FEMS Microbiol Lett , vol.206 , pp. 75-79
    • Mulbry, W.W.1    Zhu, H.2    Nour, S.M.3    Topp, E.4
  • 17
    • 84871045612 scopus 로고    scopus 로고
    • Transcriptional organization and regulatory elements of a Pseudomonas sp. strain ADP operon encoding a Lys-type regulator and a putative solute transport system
    • COI: 1:CAS:528:DC%2BC38XhslaqsLfP
    • Platero AI, García-Jaramillo M, Santero E, Govantes F (2012) Transcriptional organization and regulatory elements of a Pseudomonas sp. strain ADP operon encoding a Lys-type regulator and a putative solute transport system. J Bacteriol 194:6560–6573
    • (2012) J Bacteriol , vol.194 , pp. 6560-6573
    • Platero, A.I.1    García-Jaramillo, M.2    Santero, E.3    Govantes, F.4
  • 18
    • 34748873905 scopus 로고    scopus 로고
    • The LysR-type regulator AtzR binding site: DNA sequences involved in activation, repression and cyanuric acid-dependent repositioning
    • Porrúa O, García-Jaramillo M, Santero E, Govantes F (2007) The LysR-type regulator AtzR binding site: DNA sequences involved in activation, repression and cyanuric acid-dependent repositioning. Mol Microbiol 66:410–427
    • (2007) Mol Microbiol , vol.66 , pp. 410-427
    • Porrúa, O.1    García-Jaramillo, M.2    Santero, E.3    Govantes, F.4
  • 19
    • 77951159009 scopus 로고    scopus 로고
    • Complex interplay between the LysR-type regulator AtzR and its binding site mediates atzDEF activation in response to two distinct signals
    • Porrúa O, Platero AI, Santero E, Del Solar G, Govantes F (2010) Complex interplay between the LysR-type regulator AtzR and its binding site mediates atzDEF activation in response to two distinct signals. Mol Microbiol 76:331–347
    • (2010) Mol Microbiol , vol.76 , pp. 331-347
    • Porrúa, O.1    Platero, A.I.2    Santero, E.3    Del Solar, G.4    Govantes, F.5
  • 20
    • 0142155000 scopus 로고    scopus 로고
    • Microbial community responses to atrazine exposure and nutrient availability: linking degradation capacity to community structure
    • COI: 1:CAS:528:DC%2BD3sXotVyqsb0%3D
    • Rhine ED, Fuhrmann JJ, Radosevich M (2003) Microbial community responses to atrazine exposure and nutrient availability: linking degradation capacity to community structure. Microb Ecol 46:145–160
    • (2003) Microb Ecol , vol.46 , pp. 145-160
    • Rhine, E.D.1    Fuhrmann, J.J.2    Radosevich, M.3
  • 21
    • 4544224830 scopus 로고    scopus 로고
    • Quantitation of nucleic acids
    • Sambrook J, Russel DW, (eds), Cold Spring Harbor, New York:
    • Sambrook J, Russel DW (2001) Quantitation of nucleic acids. In: Sambrook J, Russel DW (eds) Molecular cloning: a laboratory manual, 3rd edn. Cold Spring Harbor, New York, pp A8.19–A8.24
    • (2001) Molecular cloning: a laboratory manual , pp. 19-24
    • Sambrook, J.1    Russel, D.W.2
  • 24
    • 18944379412 scopus 로고    scopus 로고
    • Purification and characterization of allophanate hydrolase (AtzF) from Pseudomonas sp. strain ADP
    • COI: 1:CAS:528:DC%2BD2MXks12ntLo%3D
    • Shapir N, Sadowsky MJ, Wackett LP (2005) Purification and characterization of allophanate hydrolase (AtzF) from Pseudomonas sp. strain ADP. J Bacteriol 187:3731–3738
    • (2005) J Bacteriol , vol.187 , pp. 3731-3738
    • Shapir, N.1    Sadowsky, M.J.2    Wackett, L.P.3
  • 25
    • 20444383161 scopus 로고    scopus 로고
    • Cooperative catabolic pathways within an atrazine-degrating enrichment culture isolated from soil
    • COI: 1:CAS:528:DC%2BD2MXltFaku7s%3D
    • Smith D, Alvey S, Crowlwy DE (2005) Cooperative catabolic pathways within an atrazine-degrating enrichment culture isolated from soil. FEMS Microbiol Ecol 53:265–273
    • (2005) FEMS Microbiol Ecol , vol.53 , pp. 265-273
    • Smith, D.1    Alvey, S.2    Crowlwy, D.E.3
  • 26
    • 84931749006 scopus 로고    scopus 로고
    • Amazon Forest carbon dynamic predicted by profiles of canopy leaf area and light environment
    • Stark SC, Leitold V, Wu JL, Hunter MO, de Castilho CV, Costa FRC et al (2012) Amazon Forest carbon dynamic predicted by profiles of canopy leaf area and light environment. Ecol Lett 15:1406–1414
    • (2012) Ecol Lett , vol.15 , pp. 1406-1414
    • Stark, S.C.1    Leitold, V.2    Wu, J.L.3    Hunter, M.O.4    de Castilho, C.V.5    Costa, F.R.C.6
  • 27
    • 0021179218 scopus 로고
    • Rapid procedure for isolation of plasmid DNA and application to epidemiological analysis
    • COI: 1:CAS:528:DyaL2cXlvVOntb4%3D
    • Takahashi S, Nagano Y (1984) Rapid procedure for isolation of plasmid DNA and application to epidemiological analysis. J Clin Microbiol 20:608–613
    • (1984) J Clin Microbiol , vol.20 , pp. 608-613
    • Takahashi, S.1    Nagano, Y.2
  • 29
    • 84911807447 scopus 로고    scopus 로고
    • AtzABC catabolic gene probe from novel atrazine-degrading rhodococcus strain isolated from a Nigerian agricultural soil
    • Umar AF, Tahir F, Larkin MJ, Oyawoye OM, Musa BL, Yerima MB et al (2012) AtzABC catabolic gene probe from novel atrazine-degrading rhodococcus strain isolated from a Nigerian agricultural soil. Adv Microbiol 2:593–597
    • (2012) Adv Microbiol , vol.2 , pp. 593-597
    • Umar, A.F.1    Tahir, F.2    Larkin, M.J.3    Oyawoye, O.M.4    Musa, B.L.5    Yerima, M.B.6
  • 30
    • 34547485940 scopus 로고    scopus 로고
    • Isolation and characterization of novel atrazine-degrading microorganisms from an agricultural soil
    • COI: 1:CAS:528:DC%2BD2sXlslCks7g%3D
    • Vibber LL, Pressler MJ, Colores GM (2007) Isolation and characterization of novel atrazine-degrading microorganisms from an agricultural soil. Appl Microbiol Biotechnol 75:921–928
    • (2007) Appl Microbiol Biotechnol , vol.75 , pp. 921-928
    • Vibber, L.L.1    Pressler, M.J.2    Colores, G.M.3
  • 31
    • 0036169012 scopus 로고    scopus 로고
    • Biodegradation of atrazine and related s-triazine compounds: from enzymes to field studies
    • COI: 1:CAS:528:DC%2BD38XhtVSit7g%3D
    • Wackett LP, Sadowsky MJ, Martinez B, Shapir N (2002) Biodegradation of atrazine and related s-triazine compounds: from enzymes to field studies. Appl Microbiol Biotechnol 58:39–45
    • (2002) Appl Microbiol Biotechnol , vol.58 , pp. 39-45
    • Wackett, L.P.1    Sadowsky, M.J.2    Martinez, B.3    Shapir, N.4
  • 32
    • 80053447784 scopus 로고    scopus 로고
    • Metabolic ability and gene characteristics of Arthrobacter sp. strain DNS10, the sole atrazine-degrading strain in a consortium isolated from black soil
    • COI: 1:CAS:528:DC%2BC3MXhsVOru77E
    • Zhang Y, Jiang Z, Cao B, Hu M, Wang Z, Dong X (2011) Metabolic ability and gene characteristics of Arthrobacter sp. strain DNS10, the sole atrazine-degrading strain in a consortium isolated from black soil. Int Biodeterior Biodegrad 65:1140–1144
    • (2011) Int Biodeterior Biodegrad , vol.65 , pp. 1140-1144
    • Zhang, Y.1    Jiang, Z.2    Cao, B.3    Hu, M.4    Wang, Z.5    Dong, X.6


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