-
1
-
-
54749141609
-
Complete rpoB gene sequencing as a suitable supplement to DNA-DNA hybridization for bacterial species and genus delineation
-
Adékambi, T., Shinnick, T. M., Raoult, D. & Drancourt, M. (2008). Complete rpoB gene sequencing as a suitable supplement to DNA-DNA hybridization for bacterial species and genus delineation. Int J Syst Evol Microbiol 58, 1807-1814.
-
(2008)
Int J Syst Evol Microbiol
, vol.58
, pp. 1807-1814
-
-
Adékambi, T.1
Shinnick, T.M.2
Raoult, D.3
Drancourt, M.4
-
2
-
-
58149305793
-
The rpoB gene as a tool for clinical microbiologists
-
Adékambi, T., Drancourt, M. & Raoult, D. (2009). The rpoB gene as a tool for clinical microbiologists. Trends Microbiol 17, 37-45.
-
(2009)
Trends Microbiol
, vol.17
, pp. 37-45
-
-
Adékambi, T.1
Drancourt, M.2
Raoult, D.3
-
3
-
-
0030572373
-
Classification of bacteria isolated from a medieval wall painting
-
Altenburger, P., Kämpfer, P., Makristathis, A., Lubitz, W. & Busse, H.-J. (1996). Classification of bacteria isolated from a medieval wall painting. J Biotechnol 47, 39-52.
-
(1996)
J Biotechnol
, vol.47
, pp. 39-52
-
-
Altenburger, P.1
Kämpfer, P.2
Makristathis, A.3
Lubitz, W.4
Busse, H.-J.5
-
4
-
-
84878846623
-
Molecular signatures for Bacillus species: Demarcation of the Bacillus subtilis and Bacillus cereus clades in molecular terms and proposal to limit the placement of new species into the genus Bacillus
-
Bhandari, V., Ahmod, N. Z., Shah, H. N. & Gupta, R. S. (2013). Molecular signatures for Bacillus species: demarcation of the Bacillus subtilis and Bacillus cereus clades in molecular terms and proposal to limit the placement of new species into the genus Bacillus. Int J Syst Evol Microbiol 63, 2712-2726.
-
(2013)
Int J Syst Evol Microbiol
, vol.63
, pp. 2712-2726
-
-
Bhandari, V.1
Ahmod, N.Z.2
Shah, H.N.3
Gupta, R.S.4
-
5
-
-
0017758250
-
A rapid method for the base ratio determination of bacterial DNA
-
Cashion, P., Holder-Franklin, M. A., McCully, J. & Franklin, M. (1977). A rapid method for the base ratio determination of bacterial DNA. Anal Biochem 81, 461-466.
-
(1977)
Anal Biochem
, vol.81
, pp. 461-466
-
-
Cashion, P.1
Holder-Franklin, M.A.2
McCully, J.3
Franklin, M.4
-
6
-
-
84898970736
-
-
8th edn, chapter 2.6.12. Strasbourg: Council of Europe, European Directorate for the Quality of Medicines
-
European Directorate for the Quality of Medicines (2014). European Pharmacopoeia, 8th edn, chapter 2.6.12. Strasbourg: Council of Europe, European Directorate for the Quality of Medicines.
-
(2014)
European Pharmacopoeia
-
-
-
7
-
-
0019797407
-
Evolutionary trees from DNA sequences: A maximum likelihood approach
-
Felsenstein, J. (1981). Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17, 368-376.
-
(1981)
J Mol Evol
, vol.17
, pp. 368-376
-
-
Felsenstein, J.1
-
8
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
9
-
-
0037228293
-
Genetic and functional analysis of the chromosome-encoded carbapenem-hydrolyzing oxacillinase OXA-40 of Acinetobacter baumannii
-
Héritier, C., Poirel, L., Aubert, D. & Nordmann, P. (2003). Genetic and functional analysis of the chromosome-encoded carbapenem-hydrolyzing oxacillinase OXA-40 of Acinetobacter baumannii. Antimicrob Agents Chemother 47, 268-273.
-
(2003)
Antimicrob Agents Chemother
, vol.47
, pp. 268-273
-
-
Héritier, C.1
Poirel, L.2
Aubert, D.3
Nordmann, P.4
-
11
-
-
0000732090
-
Evolution of protein molecules
-
Edited by H. N. Munro. New York: Academic Press
-
Jukes, T. H. & Cantor, C. R. (1969). Evolution of protein molecules. In Mammalian Protein Metabolism, pp. 21-132. Edited by H. N. Munro. New York: Academic Press.
-
(1969)
Mammalian Protein Metabolism
, pp. 21-132
-
-
Jukes, T.H.1
Cantor, C.R.2
-
12
-
-
33646190989
-
Cohnella thermotolerans gen. nov., sp. nov., and classification of ‘Paenibacillus hongkongensis’ as Cohnella hongkongensis sp. nov
-
Kämpfer, P., Rosselló-Mora, R., Falsen, E., Busse, H.-J. & Tindall, B. J. (2006). Cohnella thermotolerans gen. nov., sp. nov., and classification of ‘Paenibacillus hongkongensis’ as Cohnella hongkongensis sp. nov. Int J Syst Evol Microbiol 56, 781-786.
-
(2006)
Int J Syst Evol Microbiol
, vol.56
, pp. 781-786
-
-
Kämpfer, P.1
Rosselló-Mora, R.2
Falsen, E.3
Busse, H.-J.4
Tindall, B.J.5
-
13
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
-
(1980)
J Mol Evol
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
14
-
-
70149102453
-
Identification of Yersinia enterocolitica at the species and subspecies levels by Fourier transform infrared spectroscopy
-
Kuhm, A. E., Suter, D., Felleisen, R. & Rau, J. (2009). Identification of Yersinia enterocolitica at the species and subspecies levels by Fourier transform infrared spectroscopy. Appl Environ Microbiol 75, 5809-5813.
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 5809-5813
-
-
Kuhm, A.E.1
Suter, D.2
Felleisen, R.3
Rau, J.4
-
15
-
-
84892787621
-
Bacillus xiamenensis sp. nov., isolated from intestinal tract contents of a flathead mullet (Mugil cephalus)
-
Lai, Q., Liu, Y. & Shao, Z. (2014). Bacillus xiamenensis sp. nov., isolated from intestinal tract contents of a flathead mullet (Mugil cephalus). Antonie van Leeuwenhoek 105, 99-107.
-
(2014)
Antonie van Leeuwenhoek
, vol.105
, pp. 99-107
-
-
Lai, Q.1
Liu, Y.2
Shao, Z.3
-
16
-
-
41449091485
-
MALDI-TOF mass spectrometry compatible inactivation method for highly pathogenic microbial cells and spores
-
Lasch, P., Nattermann, H., Erhard, M., Stämmler, M., Grunow, R., Bannert, N., Appel, B. & Naumann, D. (2008). MALDI-TOF mass spectrometry compatible inactivation method for highly pathogenic microbial cells and spores. Anal Chem 80, 2026-2034.
-
(2008)
Anal Chem
, vol.80
, pp. 2026-2034
-
-
Lasch, P.1
Nattermann, H.2
Erhard, M.3
Stämmler, M.4
Grunow, R.5
Bannert, N.6
Appel, B.7
Naumann, D.8
-
17
-
-
84893190532
-
Phylogenetic diversity of the Bacillus pumilus group and the marine ecotype revealed by multilocus sequence analysis
-
Liu, Y., Lai, Q., Dong, C., Sun, F., Wang, L., Li, G. & Shao, Z. (2013). Phylogenetic diversity of the Bacillus pumilus group and the marine ecotype revealed by multilocus sequence analysis. PLoS ONE 8, e80097.
-
(2013)
PLoS ONE
, vol.8
-
-
Liu, Y.1
Lai, Q.2
Dong, C.3
Sun, F.4
Wang, L.5
Li, G.6
Shao, Z.7
-
18
-
-
77956574369
-
Genus Bacillus Cohn 1872
-
2nd edn, Edited by P. De Vos, G. M. Garrity, D. Jones, N. R. Krieg, W. Ludwig, F. A. Rainey, K. H. Schleifer & W. B. Whitman. New York: Springer
-
Logan, N. A. & De Vos, P. (2009). Genus Bacillus Cohn 1872. In Bergey’s Manual of Systematic Bacteriology, 2nd edn, vol. 3, pp. 21-128. Edited by P. De Vos, G. M. Garrity, D. Jones, N. R. Krieg, W. Ludwig, F. A. Rainey, K. H. Schleifer & W. B. Whitman. New York: Springer.
-
(2009)
Bergey’s Manual of Systematic Bacteriology
, vol.3
, pp. 21-128
-
-
Logan, N.A.1
De Vos, P.2
-
19
-
-
0003868941
-
-
Chichester: NIR Publications
-
Næs, T., Isaksson, T., Fearn, T. & Davis, T. (2002). A User-Friendly Guide to Multivariate Calibration and Classification. Chichester: NIR Publications.
-
(2002)
A User-Friendly Guide to Multivariate Calibration and Classification
-
-
Næs, T.1
Isaksson, T.2
Fearn, T.3
Davis, T.4
-
20
-
-
0026413442
-
Microbiological characterizations by FT-IR spectroscopy
-
Naumann, D., Helm, D. & Labischinski, H. (1991). Microbiological characterizations by FT-IR spectroscopy. Nature 351, 81-82.
-
(1991)
Nature
, vol.351
, pp. 81-82
-
-
Naumann, D.1
Helm, D.2
Labischinski, H.3
-
21
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
22
-
-
33748141660
-
Bacillus safensis sp. nov., isolated from spacecraft and assembly-facility surfaces
-
Satomi, M., La Duc, M. T. & Venkateswaran, K. (2006). Bacillus safensis sp. nov., isolated from spacecraft and assembly-facility surfaces. Int J Syst Evol Microbiol 56: 1735-1740.
-
(2006)
Int J Syst Evol Microbiol
, vol.56
, pp. 1735-1740
-
-
Satomi, M.1
La Duc, M.T.2
Venkateswaran, K.3
-
23
-
-
0042553279
-
Smoothing and differentiation of data by simplified least squares procedures
-
Savitzky, A. & Golay, M. J. E. (1964). Smoothing and differentiation of data by simplified least squares procedures. Anal Chem 36, 1627-1639.
-
(1964)
Anal Chem
, vol.36
, pp. 1627-1639
-
-
Savitzky, A.1
Golay, M.J.E.2
-
24
-
-
84899677143
-
Identification of carbapenem-resistant Acinetobacter baumannii clones using infrared spectroscopy
-
Sousa, C., Grosso, F., Meirinhos-Soares, L., Peixe, L. & Lopes, J. A. (2014a). Identification of carbapenem-resistant Acinetobacter baumannii clones using infrared spectroscopy. J Biophotonics 7, 287-294.
-
(2014)
J Biophotonics
, vol.7
, pp. 287-294
-
-
Sousa, C.1
Grosso, F.2
Meirinhos-Soares, L.3
Peixe, L.4
Lopes, J.A.5
-
25
-
-
84903818051
-
Discrimination of the Acinetobacter calcoaceticus-Acinetobacter baumannii complex species by Fourier transform infrared spectroscopy
-
Sousa, C., Silva, L., Grosso, F., Nemec, A., Lopes, J. & Peixe, L. (2014b). Discrimination of the Acinetobacter calcoaceticus-Acinetobacter baumannii complex species by Fourier transform infrared spectroscopy. Eur J Clin Microbiol Infect Dis 33, 1345-1353.
-
(2014)
Eur J Clin Microbiol Infect Dis
, vol.33
, pp. 1345-1353
-
-
Sousa, C.1
Silva, L.2
Grosso, F.3
Nemec, A.4
Lopes, J.5
Peixe, L.6
-
26
-
-
84948734748
-
From phylogeny to systematics: The dissection of the genus Bacillus
-
Edited by R. Berkeley, M. Heyndrickx, N. Logan & P. De Vos. Oxford: Blackwell Science
-
Stackebrandt, E. & Swiderski, J. (2008). From phylogeny to systematics: the dissection of the genus Bacillus. In Applications and Systematics of Bacillus and Relatives, pp. 8-22. Edited by R. Berkeley, M. Heyndrickx, N. Logan & P. De Vos. Oxford: Blackwell Science.
-
(2008)
Applications and Systematics of Bacillus and Relatives
, pp. 8-22
-
-
Stackebrandt, E.1
Swiderski, J.2
-
27
-
-
33947305104
-
Pseudomonas knackmussii sp. nov
-
Stolz, A., Busse, H. J. & Kämpfer, P. (2007). Pseudomonas knackmussii sp. nov. Int J Syst Evol Microbiol 57, 572-576.
-
(2007)
Int J Syst Evol Microbiol
, vol.57
, pp. 572-576
-
-
Stolz, A.1
Busse, H.J.2
Kämpfer, P.3
-
28
-
-
79957613599
-
MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
-
Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M. & Kumar, S. (2011). MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28, 2731-2739.
-
(2011)
Mol Biol Evol
, vol.28
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
Kumar, S.6
-
29
-
-
0025098748
-
Lipid composition of Halobacterium lacusprofundi
-
Tindall, B. J. (1990a). Lipid composition of Halobacterium lacusprofundi. FEMS Microbiol Lett 66, 199-202.
-
(1990)
FEMS Microbiol Lett
, vol.66
, pp. 199-202
-
-
Tindall, B.J.1
-
30
-
-
0025324750
-
A comparative study of the lipid composition of Halobacterium saccharovorum from various sources
-
Tindall, B. J. (1990b). A comparative study of the lipid composition of Halobacterium saccharovorum from various sources. Syst Appl Microbiol 13, 128-130.
-
(1990)
Syst Appl Microbiol
, vol.13
, pp. 128-130
-
-
Tindall, B.J.1
-
31
-
-
65949111437
-
Phenotypic characterization and the principles of comparative systematics
-
3rd edn, Edited by C. A. Reddy, T. J. Beveridge, J. A. Breznak, G. Marzluf, T. M. Schmidt & L. R. Snyder. Washington, DC: American Society for Microbiology
-
Tindall, B. J., Sikorski, J., Smibert, R. M. & Kreig, N. R. (2007). Phenotypic characterization and the principles of comparative systematics. In Methods for General and Molecular Microbiology, 3rd edn, pp. 330-393. Edited by C. A. Reddy, T. J. Beveridge, J. A. Breznak, G. Marzluf, T. M. Schmidt & L. R. Snyder. Washington, DC: American Society for Microbiology.
-
(2007)
Methods for General and Molecular Microbiology
, pp. 330-393
-
-
Tindall, B.J.1
Sikorski, J.2
Smibert, R.M.3
Kreig, N.R.4
-
32
-
-
0028948030
-
PCR amplification and direct sequencing of gyrB genes with universal primers and their application to the detection and taxonomic analysis of Pseudomonas putida strains
-
Yamamoto, S. & Harayama, S. (1995). PCR amplification and direct sequencing of gyrB genes with universal primers and their application to the detection and taxonomic analysis of Pseudomonas putida strains. Appl Environ Microbiol 61, 1104-1109.
-
(1995)
Appl Environ Microbiol
, vol.61
, pp. 1104-1109
-
-
Yamamoto, S.1
Harayama, S.2
-
33
-
-
0345628032
-
Reclassification of Shewanella putrefaciens Owen’s genomic group II as Shewanella baltica sp. nov
-
Ziemke, F., Höfle, M. G., Lalucat, J. & Rosselló-Mora, R. (1998). Reclassification of Shewanella putrefaciens Owen’s genomic group II as Shewanella baltica sp. nov. Int J Syst Bacteriol 48, 179-186.
-
(1998)
Int J Syst Bacteriol
, vol.48
, pp. 179-186
-
-
Ziemke, F.1
Höfle, M.G.2
Lalucat, J.3
Rosselló-Mora, R.4
|