Corrigendum to "Zn isotope fractionation during interaction with phototrophic biofilm" [Chemical Geology 390 (2014) 46-60], DOI: 10.1016/j.chemgeo.2014.10.004;Zn isotope fractionation during interaction with phototrophic biofilm

Chemical Geology

Volumn 390, Issue , 2014, Pages 46-60

  Coutaud, Aude ^a,b,c   Meheut, Merlin ^a   Viers, JérÔme ^a   Rols, Jean Luc ^b,c   Pokrovsky, Oleg S ^a,d  

^a Environmental Research Observatory (ORE) HYBAM Centre IRD d'Ile de France   (France)

^b UNIVERSITÉ PAUL SABATIER   (France)

^c CNRS   (France)

^d TOMSK STATE UNIVERSITY   (Russian Federation)

Author keywords

Fractionation mechanism; Phototrophic biofilm; Zn excretion; Zn isotopes; Zn sorption

Indexed keywords

ADSORPTION; AQUATIC ORGANISMS; BATCH REACTORS; BIOFILMS; BOUNDARY LAYERS; DIFFUSION; ION EXCHANGE; MICROORGANISMS;

AQUATIC MICRO-ORGANISMS; BATCH ADSORPTION EXPERIMENTS; FRACTIONATION MECHANISM; ISOTOPE FRACTIONATION; ISOTOPIC ENRICHMENT; ISOTOPIC FRACTIONATIONS; PHOTOTROPHIC BIOFILM; PHYSICOCHEMICAL PROCESS;

ISOTOPES;

ADSORPTION; BIOFILM; DESORPTION; DIFFUSION; ION EXCHANGE; ISOTOPIC FRACTIONATION; MICROORGANISM; PHOTOAUTOTROPHY; ZINC;

EID: 84909979575     PISSN: 00092541     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.chemgeo.2015.02.015     Document Type: Erratum

References (91)

1. Andersen M.B., Vance D., Archer C., Anderson R.F., Ellwood M.J., Allen C.S. The Zn abundance and isotopic composition of diatom frustules, a proxy for Zn availability in ocean surface seawater. Earth Planet. Sci. Lett. 2011, 301:137-145.
2. Anton A., Weltrowski A., Haney C.J., Franke S., Grass G., Rensing C., Nies D.H. Characteristics of zinc transport by two bacterial cation diffusion facilitators from Ralstonia metallidurans CH34 and Escherichia coli. J. Bacteriol. 2004, 186:7499-7507.
3. Aranda S., Borrok D.M., Wanty R.B., Balistrieri L.S. Zinc isotope investigation of surface and pore waters in a mountain watershed impacted by acid rock drainage. Sci. Total Environ. 2012, 420:202-213.
4. Arnold T.I.M., Kirk G.J.D., Wissuwa M., Frei M., Zhao F.-J., Mason T.F.D., Weiss D.J. Evidence for the mechanisms of zinc uptake by rice using isotope fractionation. Plant Cell Environ. 2010, 33:370-381.
5. Aucour A.-M., Pichat S., Macnair M., Oger P. Fractionation of stable zinc isotopes in the zinc hyperaccumulator Arabidopsis halleri and nonaccumulator Arabidopsis petraea. Environ. Sci. Technol. 2011, 45:9212-9217.
6. Balistrieri L.S., Borrok D.M., Wanty R.B., Ridley W.I. Fractionation of Cu and Zn isotopes during adsorption onto amorphous Fe (III) oxyhydroxide: experimental mixing of acid rock drainage and ambient river water. Geochim. Cosmochim. Acta 2008, 72:311-328.
7. Ban Y., Nomura M., Fujii Y. Isotope effects of zinc in crown ether chromatography. J. Nucl. Sci. Technol. 2002, 39:156-159.
8. Benmoussa M., Dauta A., Labroue L. La dénitrification liée aux biodermes périphytiques du lit de la Garonne (France). Influences de la lumière et de la teneur en oxygène de l'eau. Ann. Limnol. Int. J. Limnol. 1995, 133-141.
9. Bigeleisen J., Mayer M.G. Calculation of equilibrium constants for isotopic exchange reactions. J. Chem. Phys. 1947, 15:261-267.
10. Black J.R., Kavner A., Schauble E.A. Calculation of equilibrium stable isotope partition function ratios for aqueous zinc complexes and metallic zinc. Geochim. Cosmochim. Acta 2011, 75:769-783.
11. Borrok D., Ridley W., Wanty R. Isotopic fractionation of Cu and Zn during adsorption onto bacterial surfaces. Geochim. Cosmochim. Acta Suppl. 2008, 72:A99.
12. Bruland K.W. Oceanographic distributions of cadmium, zinc, nickel, and copper in the North Pacific. Earth Planet. Sci. Lett. 1980, 47:176-198.
13. Bruland K.W., Franks R. Mn, Ni, Cu, Zn and Cd in the western North Atlantic. Trace Metals in Sea Water 1983, 395-414. Springer.
14. Caldelas C., Dong S., Araus J.L., Weiss D.J. Zinc isotopic fractionation in Phragmites australis in response to toxic levels of zinc. J. Exp. Bot. 2011, 62:2169-2178.
15. Campbell P. Interactions between trace metals and aquatic organisms: a critique of the free-ion activity model. Metal speciation and bioavailability in aquatic systems. IUPAC Series on Analytical and Physical Chemistry of Environmental Systems 1995, 45-102. Wiley, Chichester.
16. Cavet J.S., Borrelly G.P., Robinson N.J. Zn, Cu and Co in cyanobacteria: selective control of metal availability. FEMS Microbiol. Rev. 2003, 27:165-181.
17. Chen D., Qian P., Wang W. Biokinetics of cadmium and zinc in a marine bacterium: influences of metal interaction and pre-exposure. Environ. Toxicol. Chem. 2008, 27:1794-1801.
18. Chen J., Gaillardet J., Louvat P. Zinc isotopes in the Seine River waters, France: a probe of anthropogenic contamination. Environ. Sci. Technol. 2009, 42:6494-6501.
19. Cloquet C., Carignan J., Libourel G. Isotopic composition of Zn and Pb atmospheric depositions in an urban/periurban area of northeastern France. Environ. Sci. Technol. 2006, 40:6594-6600.
20. Cloquet C., Carignan J., Lehmann M.F., Vanhaecke F. Variation in the isotopic composition of zinc in the natural environment and the use of zinc isotopes in biogeosciences: a review. Anal. Bioanal. Chem. 2008, 390:451-463.
21. Costerton J.W., Geesey G., Cheng K. How bacteria stick. Sci. Am. 1978, 238:86-95.
22. Criss R.E. Principles of Stable Isotope Distribution 1999, Oxford University Press, New York, (255 pp.).
23. Dolgopolova A., Weiss D., Seltmann R., Kober B., Mason T., Coles B., Stanley C. Use of isotope ratios to assess sources of Pb and Zn dispersed in the environment during mining and ore processing within the Orlovka-Spokoinoe mining site (Russia). Appl. Geochem. 2006, 21:563-579.
24. Eulin A., Le Cohu R. Epilithic diatom communities during the colonization of artificial substrates in the River Garonne (France). Comparison with the natural communities. Arch. Hydrobiol. 1998, 143:79-106.
25. Fagan M.J., Saier M.H. P-type ATPases of eukaryotes and bacteria: sequence analyses and construction of phylogenetic trees. J. Mol. Evol. 1994, 38:57-99.
26. Finlay J.C., Power M.E., Cabana G. Effects of water velocity on algal carbon isotope ratios: implications for river food web studies. Limnol. Oceanogr. 1999, 44:1198-1203.
27. Fujii T., Albarède F. Ab initio calculation of the Zn isotope effect in phosphates, citrates, and malates and applications to plants and soil. PLoS ONE 2012, 7:e30726.
28. Gélabert A., Pokrovsky O., Viers J., Schott J., Boudou A., Feurtet-Mazel A. Interaction between zinc and freshwater and marine diatom species: surface complexation and Zn isotope fractionation. Geochim. Cosmochim. Acta 2006, 70:839-857.
29. Genter R., Cherry D., Smith E., Cairns J. Algal-periphyton population and community changes from zinc stress in stream mesocosms. Hydrobiologia 1987, 153:261-275.
30. Gustafsson J.P. Visual MINTEQ, ver. 3.0. Compiled in Visual Basic. NET 2005 2012, KYH, Dept of Land and Water Resources Engineering, Stockholm, Sweden.
31. Hassler C.S., Wilkinson K.J. Failure of the biotic ligand and free-ion activity models to explain zinc bioaccumulation by Chlorella kesslerii. Environ. Toxicol. Chem. 2003, 22:620-626.
32. Hassler C.S., Behra R., Wilkinson K.J. Impact of zinc acclimation on bioaccumulation and homeostasis in Chlorella kesslerii. Aquat. Toxicol. 2005, 74:139-149.
33. Heijerick D., De Schamphelaere K., Janssen C. Biotic ligand model development predicting Zn toxicity to the alga Pseudokirchneriella subcapitata: possibilities and limitations. Comp. Biochem. Physiol. C Toxicol. Pharmacol. 2002, 133:207-218.
34. Jefferson K.K. What drives bacteria to produce a biofilm?. FEMS Microbiol. Lett. 2004, 236:163-173.
35. John S.G., Conway T.M. A role for scavenging in the marine biogeochemical cycling of zinc and zinc isotopes. Earth Planet. Sci. Lett. 2014, 394:159-167.
36. John S.G., Bergquist B., Saito M., Boyle E. Zinc isotope variations in phytoplankton and seawater. Geochim. Cosmochim. Acta Suppl. 2005, 69:A546.
37. John S.G., Geis R.W., Saito M.A., Boyle E.A. Zinc isotope fractionation during high-affinity and low-affinity zinc transport by the marine diatom Thalassiosira oceanica. Limnol. Oceanogr. 2007, 52:2710-2714.
38. John S.G., Park J., Zhang Z., Boyle E.A. The isotopic composition of some common forms of anthropogenic zinc. Chem. Geol. 2007, 245:61-69.
39. Jouvin D., Louvat P., Juillot F., Maréchal C.N., Benedetti M.F. Zinc isotopic fractionation: why organic matters. Environ. Sci. Technol. 2009, 43:5747-5754.
40. Jouvin D., Weiss D., Mason T., Bravin M., Louvat P., Zhao F., Ferec F., Hinsinger P., Benedetti M. Stable isotopes of Cu and Zn in higher plants: evidence for Cu reduction at the root surface and two conceptual models for isotopic fractionation processes. Environ. Sci. Technol. 2012, 46:2652-2660.
41. Juillot F., Maréchal C., Ponthieu M., Cacaly S., Morin G., Benedetti M., Hazemann J., Proux O., Guyot F. Zn isotopic fractionation caused by sorption on goethite and 2-Lines ferrihydrite. Geochim. Cosmochim. Acta 2008, 72:4886-4900.
42. Juillot F., Maréchal C., Morin G., Jouvin D., Cacaly S., Telouk P., Benedetti M.F., Ildefonse P., Sutton S., Guyot F. Contrasting isotopic signatures between anthropogenic and geogenic Zn and evidence for post-depositional fractionation processes in smelter-impacted soils from Northern France. Geochim. Cosmochim. Acta 2011, 75:2295-2308.
43. Kafantaris F.-C.A., Borrok D. Zinc isotope fractionation during surface adsorption and intracellular incorporation by bacteria. Chem. Geol. 2014, 366:42-51.
44. Kendall C., Caldwell E.A. Fundamentals of isotope geochemistry. Isotope Tracers in Catchment Hydrology 1998, 51-86. Elsevier Science B.V., Amsterdam. C. Kendall, J.J. McDonnell (Eds.).
45. Keung C.F., Guo F., Qian P., Wang W. Influences of metal-ligand complexes on the cadmium and zinc biokinetics in the marine bacterium, Bacillus firmus. Environ. Toxicol. Chem. 2008, 27:131-137.
46. 2+ ions on growth and metal accumulation in freshwater algae. Environ. Toxicol. Chem. 1997, 16:220-229.
47. Kola H., Wilkinson K.J. Cadmium uptake by a green alga can be predicted by equilibrium modelling. Environ. Sci. Technol. 2005, 39:3040-3047.
48. Kudo H., Cheng K.-J., Costerton J. Interactions between Treponema bryantii and cellulolytic bacteria in the in vitro degradation of straw cellulose. Can. J. Microbiol. 1987, 33:244-248.
49. Larner F., Rehkämper M. Evaluation of stable isotope tracing for ZnO nanomaterials - new constraints from high precision isotope analyses and modeling. Environ. Sci. Technol. 2012, 46:4149-4158.
50. Larner F., Gulson B., McCall M., Oytame Y., Rehkämper M. An inter-laboratory comparison of high precision stable isotope ratio measurements for nanoparticle tracing in biological samples. J. Anal. At. Spectrom. 2014, 29:471-477.
51. Lee J.G., Ahner B.A., Morel F.M. Export of cadmium and phytochelatin by the marine diatom Thalassiosira weissflogii. Environ. Sci. Technol. 1996, 30:1814-1821.
52. Leedjärv A., Ivask A., Virta M. Interplay of different transporters in the mediation of divalent heavy metal resistance in Pseudomonas putida KT2440. J. Bacteriol. 2008, 190:2680-2689.
53. Little S.H., Vance D., Walker-Brown C., Landing W.M. The oceanic mass balance of copper and zinc isotopes, investigated by analysis of their inputs, and outputs to ferromanganese oxide sediments. Geochim. Cosmochim. Acta 2014, 125:673-693.
54. Lu L., Tian S., Zhang J., Yang X., Labavitch J.M., Webb S.M., Latimer M., Brown P.H. Efficient xylem transport and phloem remobilization of Zn in the hyperaccumulator plant species Sedum alfredii. New Phytol. 2013, 198:721-731.
55. Lyautey E. Caractérisation, dynamique et facteurs de contrÔle des communautés bactériennes de biofilms de rivière 2005, 3. (Ph.D. thesis), Univ. Toulouse, France, (192 pp.).
56. Lyautey E., Jackson C.R., Cayrou J., Rols J.L., Garabetian F. Bacterial community succession in natural river biofilm assemblages. Microb. Ecol. 2005, 50:589-601.
57. Maréchal C.N., Télouk P., Albarède F. Precise analysis of copper and zinc isotopic compositions by plasma-source mass spectrometry. Chem. Geol. 1999, 156:251-273.
58. Maréchal C.N., Nicolas E., Douchet C., Albarède F. Abundance of zinc isotopes as a marine biogeochemical tracer. Geochem. Geophys. Geosyst. 2000, 1:1525-2027.
59. Mason T., Weiss D., Coles B., Horstwood M., Parrish R., Zhao F., Kirk G. Isotopic discrimination of zinc during root-uptake and cellular incorporation in higher plants. Presented at the EGS-AGU-EUG Joint Assembly 2003, 2954.
60. Mirimanoff N., Wilkinson K. Regulation of Zn accumulation by a freshwater Gram-positive bacterium (Rhodococcus opacus). Environ. Sci. Technol. 2000, 34:616-622.
61. Moynier F., Pichat S., Pons M.-L., Fike D., Balter V., Albarède F. Isotopic fractionation and transport mechanisms of Zn in plants. Chem. Geol. 2009, 267:125-130.
62. 3H to determine autotrophic production and bacterial protein production in periphyton. Microb. Ecol. 1995, 30:227-237.
63. Niederlehner B.R., Cairns J. Community response to cumulative toxic impact: effects of acclimation on zinc tolerance of Aufwuchs. Can. J. Fish. Aquat. Sci. 1992, 49:2155-2163.
64. Nies D.H. Efflux-mediated heavy metal resistance in prokaryotes. FEMS Microbiol. Rev. 2003, 27:313-339.
65. Nold S.C., Ward D.M. Photosynthate partitioning and fermentation in hot spring microbial mat communities. Appl. Environ. Microbiol. 1996, 62:4598-4607.
66. Paule A. Dynamique des communautés microbiennes des biofilms phototrophes à différents niveaux d'intégration biologique: des successions écologiques aux réponses à l'exposition à un herbicide 2012, 3. (PhD Thesis), Univ. Toulouse, France, (361 pp.).
67. Paule A., Roubeix V., Lauga B., Duran R., Delmas F., Paul E., Rols J.L. Changes in tolerance to herbicide toxicity throughout development stages of phototrophic biofilms. Aquat. Toxicol. 2013, 144-145:310-321.
68. Pokrovsky O., Viers J., Freydier R. Zinc stable isotope fractionation during its adsorption on oxides and hydroxides. J. Colloid Interface Sci. 2005, 291:192-200.
69. Rodushkin I., Stenberg A., Andrén H., Malinovsky D., Baxter D.C. Isotopic fractionation during diffusion of transition metal ions in solution. Anal. Chem. 2004, 76:2148-2151.
70. Romani A., Guasch H., Munoz I., Ruana J., Vilalta E., Schwartz T., Emtiazi F., Sabater S. Biofilm structure and function and possible implications for riverine DOC dynamics. Microb. Ecol. 2004, 47:316-328.
71. Saager P.M. On the Relationships Between Dissolved Trace Metals and Nutrients in Seawater: Implications for the Use of Cadmium as a Paleoceanographic Tracer 1994, (PhD Thesis), Univ. Vrije, Amsterdam, The Netherlands, (240 pp.).
72. Smolders E., Versieren L., Shuofei D., Mattielli N., Weiss D., Petrov I., Degryse F. Isotopic fractionation of Zn in tomato plants suggests the role of root exudates on Zn uptake. Plant Soil 2013, 370:605-613.
73. Sobczak W.V. Epilithic bacterial responses to variations in algal biomass and labile dissolved organic carbon during biofilm colonization. J. N. Am. Benthol. Soc. 1996, 15:143-154.
74. Stanier R., Kunisawa R., Mandel M., Cohen-Bazire G. Purification and properties of unicellular blue-green algae (order Chroococcales). Bacteriol. Rev. 1971, 35:171-205.
75. Stoodley P., Sauer K., Davies D., Costerton J.W. Biofilms as complex differentiated communities. Annu. Rev. Microbiol. 2002, 56:187-209.
76. Tang Y.T., Cloquet C., Sterckeman T., Echevarria G., Carignan J., Qiu R.L., Morel J.L. Fractionation of stable Zn isotopes in the field-grown Zn hyperaccumulator Noccaea caerulescens and the Zn-tolerant plant Silene vulgaris. Environ. Sci. Technol. 2012, 46:9972-9979.
77. Teissier S., Garabetian F., Torre M., Dalger D., Labroue L. Impact of an urban centre on the nitrogen cycle processes of epilithic biofilms during a summer low-water period. River Res. Appl. 2002, 18:21-30.
78. Trudeau V., Rasmussen J.B. The effect of water velocity on stable carbon and nitrogen isotope signatures of periphyton. Limnol. Oceanogr. 2003, 48:2194-2199.
79. Vance D., Archer C., Bermin J., Kennaway G., Cox E., Statham P., Lohan M., Ellwood M. Zn isotopes as a new tracer of metal micronutrient usage in the oceans. Geochim. Cosmochim. Acta 2006, 70:A666.
80. Viers J., Oliva P., Nonell A., Gélabert A., Sonke J.E., Freydier R., Gainville R., Dupré B. Evidence of Zn isotopic fractionation in a soil-plant system of a pristine tropical watershed (Nsimi, Cameroon). Chem. Geol. 2007, 239:124-137.
81. Viers J., Prokushkin A.S., Pokrovsky O.S., Beaulieu E., Oliva P., Dupré B. Seasonal and spatial variability of elemental concentrations in boreal forest larch folliage of Central Siberia on continuous permafrost. Biogeochemistry 2013, 113:435-449.
82. Wanty R.B., Podda F., De Giudici G., Cidu R., Lattanzi P. Zinc isotope and transition-element dynamics accompanying hydrozincite biomineralization in the Rio Naracauli, Sardinia, Italy. Chem. Geol. 2013, 337-338:1-10.
83. Watnick P., Kolter R. Biofilm, city of microbes. J. Bacteriol. 2000, 182:2675-2679.
84. Weiss D., Mason T.F., Zhao F., Kirk G., Coles B., Horstwood M. Isotopic discrimination of zinc in higher plants. New Phytol. 2005, 165:703-710.
85. Wetzel R.G. Periphyton of Freshwater Ecosystems 1983, Dr. W. Junk Publishers, Boston, (346 pp.).
86. Whitton B.A. Toxicity of heavy metals to freshwater algae: a review. Phykos 1970, 9:116-125.
87. Whitton B.A. Zinc and plants in rivers and streams. Algae as Ecological Indicators 1980, 257-280. Academic Press, London. L.E. Shubert (Ed.).
88. Wilde K.L., Stauber J.L., Markich S.J., Franklin N.M., Brown P.L. The effect of pH on the uptake and toxicity of copper and zinc in a tropical freshwater alga (Chlorella sp.). Arch. Environ. Contam. Toxicol. 2006, 51:174-185.
89. 65Zn) in the growing alga Selenastrum capricornutum Printz. Environ. Pollut. 1995, 88:85-90.
90. Zeng J., Zhao D., Ji Y., Wu Q. Comparison of heavy metal accumulation by a bloom-forming cyanobacterium, Microcystis aeruginosa. Chin. Sci. Bull. 2012, 57:3790-3797.
91. Zhu X., Guo Y., Williams R., O'Nions R., Matthews A., Belshaw N., Canters G., De Waal E., Weser U., Burgess B. Mass fractionation processes of transition metal isotopes. Earth Planet. Sci. Lett. 2002, 200:47-62.