Development and characterization of microsatellite markers for the Chinese endangered medicinal plant Tetrastigma hemsleyanum

Genetics and Molecular Research

Volumn 13, Issue 4, 2014, Pages 9062-9067

  Wang, Y H ^a,b   Chen, N ^a,b   Zhang, Y C ^a   Fu, C X ^a,b  

^a ZHEJIANG UNIVERSITY   (China)

^b ZHEJIANG UNIVERSITY   (China)

Author keywords

Medicinal plant; Microsatellites; Population genetics; Tetrastigma hemsleyanum

Indexed keywords

ARTICLE; DNA POLYMORPHISM; ENDANGERED SPECIES; GENE FREQUENCY; GENE LOCUS; GENETIC VARIABILITY; HETEROZYGOSITY; MEDICINAL PLANT; MICROSATELLITE MARKER; NONHUMAN; NUCLEOTIDE SEQUENCE; PLANT GENE; POPULATION RESEARCH; SPECIES CONSERVATION; SPECIES RICHNESS; TETRASTIGMA HEMSLEYANUM; VITACEAE; ALLELE; CHEMISTRY; CHINA; DNA SEQUENCE; GENE LINKAGE DISEQUILIBRIUM; GENETIC POLYMORPHISM; GENETICS; GENOTYPE; MOLECULAR GENETICS; POLYMERASE CHAIN REACTION;

TETRASTIGMA;

MICROSATELLITE DNA; PLANT DNA;

ALLELES; CHINA; DNA, PLANT; ENDANGERED SPECIES; GENE FREQUENCY; GENOTYPE; LINKAGE DISEQUILIBRIUM; MICROSATELLITE REPEATS; MOLECULAR SEQUENCE DATA; PLANTS, MEDICINAL; POLYMERASE CHAIN REACTION; POLYMORPHISM, GENETIC; SEQUENCE ANALYSIS, DNA; VITACEAE;

EID: 84908508198     PISSN: None     EISSN: 16765680     Source Type: Journal    
DOI: 10.4238/2014.October.31.21     Document Type: Article

References (16)

1. Chen P, Chen L and Wen J (2011). The first phylogenetic analysis of Tetrastigma (Miq.) Planch., the host of Rafflesiaceae. Taxon 60: 499-512.
2. Clarke KR and Gorley RN (2001). Primer v5: User Manual/Tutorial. Primer-E Ltd., Plymouth, UK.
3. Ding GQ, Zheng JX, Wei KM and Pu JB (2005). Toxicological effects of the extract of Tetrastigma hemsleyanum Diels et. Gilg on hepatocellular carcinoma cell line HepG2 and primary rat hepatocytes in vitro. Zhejiang Prev. Med. 17: 1-5.
4. Jiang WM, Fu YM, Zhou XL and Fu CX (2011). High-frequency shoot regeneration of nodal explants from Tetrastigma hemsleyanum Diels et. Gilg: A valuable medicinal plant. Afr. J. Biotechnol. 10: 12177-12181.
5. Kalinowski ST, Taper ML and Marshall TC (2007). Revising how the computer program cervus accommodates genotyping error increases success in paternity assignment. Mol. Ecol. 16: 1099-1106.
6. Lian CL, Abdul WM, Geng Q, Shimatani K, et al. (2006). An improved technique for isolating codominant compound microsatellite markers. J. Plant Res. 119: 415-417.
7. Liu D, Ju JH, Lin G, Xu XD, et al. (2002). New C-glycosylflavones from Tetrastigma hemsleyanum (Vitaceae). Acta. Bot. Sin. 44: 227-229.
8. Ma WW, Zhai SN, Zhang YH and Qiu YX (2012). Development and characterization of microsatellite markers for Emmenopterys henryi (Rubiaceae), a rare tree from China. Am. J. Bot. 99: e179-e181.
9. Panova M, Mäkinen T, Fokin M, André C, et al. (2008). Microsatellite cross-species amplification in the genus Littorina and detection of null alleles in Littorina saxatilis. J. Mollus. Stud. 74: 111-117.
10. Rice WR (1989). Analyzing tables of statistical tests. Evolution 43: 223-225.
11. Rousset F (2008). Genepop'007: a complete re-implementation of the genepop software for Windows and Linux. Mol. Ecol. Resour. 8: 103-106.
12. Selkoe KA and Toonen RJ (2006). Microsatellites for ecologists: a practical guide to using and evaluating microsatellite markers. Ecol. Lett. 9: 615-629.
13. Van Oosterhout C, Hutchinson WF, Wills DP and Shipley P (2004). Micro-checker: software for identifying and correcting genotyping errors in microsatellite data. Mol. Ecol. Notes 4: 535-538.
14. Wang A, Wujisguleng W, Liu YJ, Liu Y, et al. (2013). Isolation and characterization of polymorphic microsatellite loci for the valuable medicinal plant Astragalus mongholicus. Open J. Genet. 3: 89-92.
15. Xu CJ, Bai NN, Meng J, Fu JY, et al. (2009). A study on effect of anti-tumor of extract from Tetrastigma hemsleyanum Diels et. Gilg and its mechanisms in vivo. Chin. J. Health. Lab. Technol. 2: 278-280.
16. Xu CJ, Ding GQ, Fu JY, Meng J, et al. (2008). Immunoregulatory effects of ethyl-acetate fraction of extracts from Tetrastigma hemsleyanum Diels et. Gilg on immune functions of ICR mice. Biomed. Environ. Sci. 21: 325-331.