Molecular Biology: Transcriptomics

Encyclopedia of Food Microbiology: Second Edition

Volumn , Issue , 2014, Pages 803-807

  Cocolin, L ^a   Rantsiou, K ^a  

^a UNIVERSITY OF TURIN   (Italy)

Author keywords

Food grade and spoilage microorganisms; Foodborne pathogens; Gene expression; Microarrays; Molecular methods; MRNA; QPCR; Regulation of expression; RNA sequencing; Stress response; Transcriptomics; Virulence

Indexed keywords

EID: 84908422495     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1016/B978-0-12-384730-0.00436-5     Document Type: Chapter

References (8)

1. Higuchi R., Gyllensten U., Persing D.H. Next-generation DNA sequencing and microbiology. Molecular Microbiology: Diagnostic Principles and Practice 2011, 301-312. ASM Press, Washington, DC. second ed. D.H. Persing, F.C. Tenover, Y.-W. Tang, F.S. Nolte, R.T. Hayden, A. Van Belkum (Eds.).
2. Rantsiou K., Mataragas M., Jespersen L., Cocolin L. Understanding the behavior of foodborne pathogens in the food chain: new information for risk assessment analysis. Trends in Food Science and Technology 2011, 22:S21-S29.
3. Sharkey F.H., Banat I.M., Marchant R. Detection and quantification of gene expression in environmental bacteriology. Applied and Environmental Microbiology 2004, 70:3795-3806.
4. Van Vliet A.H.M. Next generation sequencing of microbial transcriptomes: challenges and opportunities. FEMS Microbiology Letters 2010, 302:1-7.
5. VanGuilder H.D., Vrana K.E., Freeman W.M. Twenty-five years of quantitative PCR for gene expression analysis. Biotechniques 2008, 44:619-626.
6. Wilson I.G. Inhibition and facilitation of nucleic acid amplification. Applied and Environmental Microbiology 1997, 63:3741-3751.
7. Zagorec M., Chaillou S., Champomier-Vergès M.C., Crutz-Le Coq A.-M. Role of bacterial 'omics' in food fermentation. Molecular Techniques in the Microbial Ecology of Fermented Foods 2008, 255-273. Springer, New York. first ed. L. Cocolin, D. Ercolini (Eds.).
8. Zhou J., Thompson D.K. Challenges in applying microarrays to environmental studies. Current Opinion in Biotechnology 2002, 13:204-207.