-
1
-
-
84883613247
-
Diversity of picoeukaryotes at an oligotrophic site off the Northeastern Red Sea Coast
-
Acosta F, Ngugi DK & Stingl U (2013) Diversity of picoeukaryotes at an oligotrophic site off the Northeastern Red Sea Coast. Aquat Biosyst 9: 16.
-
(2013)
Aquat Biosyst
, vol.9
, pp. 16
-
-
Acosta, F.1
Ngugi, D.K.2
Stingl, U.3
-
2
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW & Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215: 403-410.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
3
-
-
0033103941
-
Phylogenetic analysis of the SSU rRNA from members of the Chrysophyceae
-
Andersen RA, de Peer YV, Potter D, Sexton JP, Kawachi M & LaJeunesse T (1999) Phylogenetic analysis of the SSU rRNA from members of the Chrysophyceae. Protist 150: 71-84.
-
(1999)
Protist
, vol.150
, pp. 71-84
-
-
Andersen, R.A.1
de Peer, Y.V.2
Potter, D.3
Sexton, J.P.4
Kawachi, M.5
LaJeunesse, T.6
-
4
-
-
34548036946
-
The interplay between host toxins and parasitism by Amoebophrya
-
Bai X, Adolf JE, Bachvaroff T, Place AR & Coats DW (2007) The interplay between host toxins and parasitism by Amoebophrya. Harmful Algae 6: 670-678.
-
(2007)
Harmful Algae
, vol.6
, pp. 670-678
-
-
Bai, X.1
Adolf, J.E.2
Bachvaroff, T.3
Place, A.R.4
Coats, D.W.5
-
5
-
-
84864007401
-
Radiolaria associated with large diversity of marine alveolates
-
Bråte J, Krabberød AK, Dolven JK, Ose RF, Kristensen T, Bjørklund KR & Shalchian-Tabrizi K (2012) Radiolaria associated with large diversity of marine alveolates. Protist 163: 767-777.
-
(2012)
Protist
, vol.163
, pp. 767-777
-
-
Bråte, J.1
Krabberød, A.K.2
Dolven, J.K.3
Ose, R.F.4
Kristensen, T.5
Bjørklund, K.R.6
Shalchian-Tabrizi, K.7
-
6
-
-
0034043778
-
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
-
Castresana J (2000) Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol Biol Evol 17: 540-552.
-
(2000)
Mol Biol Evol
, vol.17
, pp. 540-552
-
-
Castresana, J.1
-
7
-
-
59049093492
-
Genetic diversity of picoeukaryotes in a semi-enclosed harbour in the subtropical western Pacific Ocean
-
Cheung MK, Chu KH, Li CP, Kwan HS & Wong CK (2008) Genetic diversity of picoeukaryotes in a semi-enclosed harbour in the subtropical western Pacific Ocean. Aquat Microb Ecol 53: 295-305.
-
(2008)
Aquat Microb Ecol
, vol.53
, pp. 295-305
-
-
Cheung, M.K.1
Chu, K.H.2
Li, C.P.3
Kwan, H.S.4
Wong, C.K.5
-
8
-
-
0032838811
-
Parasitic life styles of marine dinoflagellates
-
Coats DW (1999) Parasitic life styles of marine dinoflagellates. J Eukaryot Microbiol 46: 402-409.
-
(1999)
J Eukaryot Microbiol
, vol.46
, pp. 402-409
-
-
Coats, D.W.1
-
9
-
-
0003373290
-
Parasitism of photosynthetic dinoflagellates in a shallow subestuary of Chesapeake Bay, USA
-
Coats DW, Adam EJ, Gallegos CL & Hedrick S (1996) Parasitism of photosynthetic dinoflagellates in a shallow subestuary of Chesapeake Bay, USA. Aquat Microb Ecol 11: 1-9.
-
(1996)
Aquat Microb Ecol
, vol.11
, pp. 1-9
-
-
Coats, D.W.1
Adam, E.J.2
Gallegos, C.L.3
Hedrick, S.4
-
10
-
-
22044432865
-
Protistan diversity estimates based on 18S rDNA from seawater incubations in the Western North Atlantic
-
Countway PD, Gast RJ, Savai P & Caron DA (2005) Protistan diversity estimates based on 18S rDNA from seawater incubations in the Western North Atlantic. J Eukaryot Microbiol 52: 95-106.
-
(2005)
J Eukaryot Microbiol
, vol.52
, pp. 95-106
-
-
Countway, P.D.1
Gast, R.J.2
Savai, P.3
Caron, D.A.4
-
11
-
-
34247859231
-
Distinct protistan assemblages characterize the euphotic zone and deep sea (2500 m) of the western North Atlantic (Sargasso Sea and Gulf Stream)
-
Countway PD, Gast RJ, Dennett MR, Savai P, Rose JM & Caron DA (2007) Distinct protistan assemblages characterize the euphotic zone and deep sea (2500 m) of the western North Atlantic (Sargasso Sea and Gulf Stream). Environ Microbiol 9: 1219-1232.
-
(2007)
Environ Microbiol
, vol.9
, pp. 1219-1232
-
-
Countway, P.D.1
Gast, R.J.2
Dennett, M.R.3
Savai, P.4
Rose, J.M.5
Caron, D.A.6
-
12
-
-
78649618453
-
Seasonal analysis of protistan community structure and diversity at the USC microbial observatory (San Pedro Channel, North Pacific Ocean)
-
Countway PD, Vigil PD, Schnetzer A, Moorthi SD & Caron DA (2010) Seasonal analysis of protistan community structure and diversity at the USC microbial observatory (San Pedro Channel, North Pacific Ocean). Limnol Oceanogr 55: 2381-2396.
-
(2010)
Limnol Oceanogr
, vol.55
, pp. 2381-2396
-
-
Countway, P.D.1
Vigil, P.D.2
Schnetzer, A.3
Moorthi, S.D.4
Caron, D.A.5
-
13
-
-
84864453108
-
jModelTest 2: more models, new heuristics and parallel computing
-
Darriba D, Taboada GL, Doallo R & Posada D (2012) jModelTest 2: more models, new heuristics and parallel computing. Nat Methods 9: 772.
-
(2012)
Nat Methods
, vol.9
, pp. 772
-
-
Darriba, D.1
Taboada, G.L.2
Doallo, R.3
Posada, D.4
-
14
-
-
84868108573
-
An original mode of symbiosis in open ocean plankton
-
Decelle J, Probert I, Bittner L, Desdevises Y, Colin S, de Vargas C, Galí M, Simó R & Not F (2012) An original mode of symbiosis in open ocean plankton. P Natl Acad Sci USA 109: 18000-18005.
-
(2012)
P Natl Acad Sci USA
, vol.109
, pp. 18000-18005
-
-
Decelle, J.1
Probert, I.2
Bittner, L.3
Desdevises, Y.4
Colin, S.5
de Vargas, C.6
Galí, M.7
Simó, R.8
Not, F.9
-
15
-
-
79958011072
-
Emerging diversity within chrysophytes, choanoflagellates and bicosoecids based on molecular surveys
-
Del Campo J & Massana R (2011) Emerging diversity within chrysophytes, choanoflagellates and bicosoecids based on molecular surveys. Protist 162: 435-448.
-
(2011)
Protist
, vol.162
, pp. 435-448
-
-
Del Campo, J.1
Massana, R.2
-
16
-
-
33744958625
-
Analysis of photosynthetic picoeukaryote diversity at open ocean sites in the Arabian Sea using a PCR biased towards marine algal plastids
-
Fuller N, Campbell C, Allen D, Pitt F, Zwirglmaier K, Le Gall F, Vaulot D & Scanlan D (2006) Analysis of photosynthetic picoeukaryote diversity at open ocean sites in the Arabian Sea using a PCR biased towards marine algal plastids. Aquat Microb Ecol 43: 79-93.
-
(2006)
Aquat Microb Ecol
, vol.43
, pp. 79-93
-
-
Fuller, N.1
Campbell, C.2
Allen, D.3
Pitt, F.4
Zwirglmaier, K.5
Le Gall, F.6
Vaulot, D.7
Scanlan, D.8
-
17
-
-
0035493450
-
Photosymbiotic associations in planktonic foraminifera and radiolaria
-
Gast RJ & Caron DA (2001) Photosymbiotic associations in planktonic foraminifera and radiolaria. Hydrobiologia 461: 1-7.
-
(2001)
Hydrobiologia
, vol.461
, pp. 1-7
-
-
Gast, R.J.1
Caron, D.A.2
-
18
-
-
78650781042
-
Solenicola setigera is the first characterized member of the abundant and cosmopolitan uncultured marine stramenopile group MAST-3
-
Gómez F, Moreira D, Benzerara K & López-García P (2011) Solenicola setigera is the first characterized member of the abundant and cosmopolitan uncultured marine stramenopile group MAST-3. Environ Microbiol 13: 193-202.
-
(2011)
Environ Microbiol
, vol.13
, pp. 193-202
-
-
Gómez, F.1
Moreira, D.2
Benzerara, K.3
López-García, P.4
-
19
-
-
55849101172
-
Widespread occurrence and genetic diversity of marine parasitoids belonging to Syndiniales (Alveolata)
-
Guillou L, Viprey M, Chambouvet A, Welsh RM, Kirkham AR, Massana R, Scanlan DJ & Worden AZ (2008) Widespread occurrence and genetic diversity of marine parasitoids belonging to Syndiniales (Alveolata). Environ Microbiol 10: 3349-3365.
-
(2008)
Environ Microbiol
, vol.10
, pp. 3349-3365
-
-
Guillou, L.1
Viprey, M.2
Chambouvet, A.3
Welsh, R.M.4
Kirkham, A.R.5
Massana, R.6
Scanlan, D.J.7
Worden, A.Z.8
-
20
-
-
84875623291
-
2): a catalog of unicellular eukaryote small sub-unit rRNA sequences with curated taxonomy
-
2): a catalog of unicellular eukaryote small sub-unit rRNA sequences with curated taxonomy. Nucleic Acids Res 41: D597-D604.
-
(2013)
Nucleic Acids Res
, vol.41
, pp. D597-D604
-
-
Guillou, L.1
Bachar, D.2
Audic, S.3
-
21
-
-
77950806408
-
New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0
-
Guindon S, Dufayard J-F, Lefort V, Anisimova M, Hordijk W & Gascuel O (2010) New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Syst Biol 59: 307-321.
-
(2010)
Syst Biol
, vol.59
, pp. 307-321
-
-
Guindon, S.1
Dufayard, J.-F.2
Lefort, V.3
Anisimova, M.4
Hordijk, W.5
Gascuel, O.6
-
22
-
-
34748886657
-
PAST: paleontological statistics software package for education and data analysis
-
Hammer Ø, Harper DAT & Ryan PD (2001) PAST: paleontological statistics software package for education and data analysis. Palaeontologia Electronica 4: 1-9.
-
(2001)
Palaeontologia Electronica
, vol.4
, pp. 1-9
-
-
Hammer, Ø.1
Harper, D.A.T.2
Ryan, P.D.3
-
23
-
-
77957792278
-
Phytoplankton community at warm eddies in the northern South China Sea in winter 2003/2004
-
Huang B, Hu J, Xu H, Cao Z & Wang D (2010) Phytoplankton community at warm eddies in the northern South China Sea in winter 2003/2004. Deep Sea Res Part 2 Top Stud Oceanogr 57: 1792-1798.
-
(2010)
Deep Sea Res Part 2 Top Stud Oceanogr
, vol.57
, pp. 1792-1798
-
-
Huang, B.1
Hu, J.2
Xu, H.3
Cao, Z.4
Wang, D.5
-
24
-
-
77956094365
-
2 fixation by small prymnesiophytes in the subtropical and tropical northeast Atlantic Ocean
-
2 fixation by small prymnesiophytes in the subtropical and tropical northeast Atlantic Ocean. ISME J 4: 1180-1192.
-
(2010)
ISME J
, vol.4
, pp. 1180-1192
-
-
Jardillier, L.1
Zubkov, M.V.2
Pearman, J.3
Scanlan, D.J.4
-
25
-
-
0036048241
-
Ciliate grazing on the parasite Amoebophrya sp. decreases infection of the red-tide dinoflagellate Akashiwo sanguinea
-
Johansson M & Coats DW (2002) Ciliate grazing on the parasite Amoebophrya sp. decreases infection of the red-tide dinoflagellate Akashiwo sanguinea. Aquat Microb Ecol 28: 69-78.
-
(2002)
Aquat Microb Ecol
, vol.28
, pp. 69-78
-
-
Johansson, M.1
Coats, D.W.2
-
26
-
-
84875619226
-
MAFFT multiple sequence alignment software version 7: improvements in performance and usability
-
Katoh K & Standley DM (2013) MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol 30: 772-780.
-
(2013)
Mol Biol Evol
, vol.30
, pp. 772-780
-
-
Katoh, K.1
Standley, D.M.2
-
27
-
-
79953749141
-
Molecular identification of reproductive cells released from Cypassis irregularis Nigrini (Radiolaria)
-
Kimoto K, Yuasa T & Takahashi O (2011) Molecular identification of reproductive cells released from Cypassis irregularis Nigrini (Radiolaria). Environ Microbiol Rep 3: 86-90.
-
(2011)
Environ Microbiol Rep
, vol.3
, pp. 86-90
-
-
Kimoto, K.1
Yuasa, T.2
Takahashi, O.3
-
28
-
-
67249112629
-
Radiolaria: major exporters of organic carbon to the deep ocean
-
Lampitt RS, Salter I & Johns D (2009) Radiolaria: major exporters of organic carbon to the deep ocean. Global Biogeochem Cycles 23: GB1010.
-
(2009)
Global Biogeochem Cycles
, vol.23
, pp. GB1010
-
-
Lampitt, R.S.1
Salter, I.2
Johns, D.3
-
29
-
-
0028163796
-
Primary production of prochlorophytes, cyanobacteria, and eucaryotic ultraphytoplankton: measurements from flow cytometric sorting
-
Li WKW (1994) Primary production of prochlorophytes, cyanobacteria, and eucaryotic ultraphytoplankton: measurements from flow cytometric sorting. Limnol Oceanogr 39: 169-175.
-
(1994)
Limnol Oceanogr
, vol.39
, pp. 169-175
-
-
Li, W.K.W.1
-
30
-
-
58149101695
-
The spatial and temporal distribution of microalgae in the South China Sea: evidence from GIS-based analysis of 18S rDNA sequences
-
Li L, Huang Q, Wu S, Lin D, Chen J & Chen Y (2008) The spatial and temporal distribution of microalgae in the South China Sea: evidence from GIS-based analysis of 18S rDNA sequences. Sci China C Life Sci 51: 1121-1128.
-
(2008)
Sci China C Life Sci
, vol.51
, pp. 1121-1128
-
-
Li, L.1
Huang, Q.2
Wu, S.3
Lin, D.4
Chen, J.5
Chen, Y.6
-
31
-
-
79551714615
-
Diversity and distribution of planktonic protists in the northern South China Sea
-
Li L-Y, Lin D, Chen J-H, Wu S-H, Huang Q-J, Zhou H, Qu L-H & Chen Y-Q (2010) Diversity and distribution of planktonic protists in the northern South China Sea. J Plankton Res 33: 445-456.
-
(2010)
J Plankton Res
, vol.33
, pp. 445-456
-
-
Li, L.-Y.1
Lin, D.2
Chen, J.-H.3
Wu, S.-H.4
Huang, Q.-J.5
Zhou, H.6
Qu, L.-H.7
Chen, Y.-Q.8
-
32
-
-
84861142045
-
Distribution patterns and phylogeny of marine stramenopiles in the north Pacific Ocean
-
Lin Y-C, Campbell T, Chung C-C, Gong G-C, Chiang K-P & Worden AZ (2012) Distribution patterns and phylogeny of marine stramenopiles in the north Pacific Ocean. Appl Environ Microbiol 78: 3387-3399.
-
(2012)
Appl Environ Microbiol
, vol.78
, pp. 3387-3399
-
-
Lin, Y.-C.1
Campbell, T.2
Chung, C.-C.3
Gong, G.-C.4
Chiang, K.-P.5
Worden, A.Z.6
-
33
-
-
34548403893
-
Seasonal variability of picoplankton in the Northern South China Sea at the SEATS station
-
Liu H, Chang J, Tseng C-M, Wen L-S & Liu KK (2007) Seasonal variability of picoplankton in the Northern South China Sea at the SEATS station. Deep Sea Res Part 2 Top Stud Oceanogr 54: 1602-1616.
-
(2007)
Deep Sea Res Part 2 Top Stud Oceanogr
, vol.54
, pp. 1602-1616
-
-
Liu, H.1
Chang, J.2
Tseng, C.-M.3
Wen, L.-S.4
Liu, K.K.5
-
34
-
-
69149100641
-
Extreme diversity in noncalcifying haptophytes explains a major pigment paradox in open oceans
-
Liu H, Probert I, Uitz J, Claustre H, Aris-Brosou S, Frada M, Not F & de Vargas C (2009) Extreme diversity in noncalcifying haptophytes explains a major pigment paradox in open oceans. P Natl Acad Sci USA 106: 12803-12808.
-
(2009)
P Natl Acad Sci USA
, vol.106
, pp. 12803-12808
-
-
Liu, H.1
Probert, I.2
Uitz, J.3
Claustre, H.4
Aris-Brosou, S.5
Frada, M.6
Not, F.7
de Vargas, C.8
-
35
-
-
33646583481
-
Diversity and distribution of marine microbial eukaryotes in the Arctic Ocean and adjacent seas
-
Lovejoy C, Massana R & Pedrós-Alió C (2006) Diversity and distribution of marine microbial eukaryotes in the Arctic Ocean and adjacent seas. Appl Environ Microbiol 72: 3085-3095.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 3085-3095
-
-
Lovejoy, C.1
Massana, R.2
Pedrós-Alió, C.3
-
36
-
-
71249094329
-
Eukaryotic diversity and phylogeny using small- and large-subunit ribosomal RNA genes from environmental samples
-
Marande W, López-García P & Moreira D (2009) Eukaryotic diversity and phylogeny using small- and large-subunit ribosomal RNA genes from environmental samples. Environ Microbiol 11: 3179-3188.
-
(2009)
Environ Microbiol
, vol.11
, pp. 3179-3188
-
-
Marande, W.1
López-García, P.2
Moreira, D.3
-
37
-
-
77249178136
-
Molecular phylogeny and classification of the Mamiellophyceae class. nov. (Chlorophyta) based on sequence comparisons of the nuclear- and plastid-encoded rRNA operons
-
Marin B & Melkonian M (2010) Molecular phylogeny and classification of the Mamiellophyceae class. nov. (Chlorophyta) based on sequence comparisons of the nuclear- and plastid-encoded rRNA operons. Protist 161: 304-336.
-
(2010)
Protist
, vol.161
, pp. 304-336
-
-
Marin, B.1
Melkonian, M.2
-
38
-
-
80053289210
-
Eukaryotic picoplankton in surface oceans
-
Massana R (2011) Eukaryotic picoplankton in surface oceans. Annu Rev Microbiol 65: 91-110.
-
(2011)
Annu Rev Microbiol
, vol.65
, pp. 91-110
-
-
Massana, R.1
-
39
-
-
8144221197
-
Picoeukaryotic diversity in an oligotrophic coastal site studied by molecular and culturing approaches
-
Massana R, Balagué V, Guillou L & Pedrós-Alió C (2004a) Picoeukaryotic diversity in an oligotrophic coastal site studied by molecular and culturing approaches. FEMS Microbiol Ecol 50: 231-243.
-
(2004)
FEMS Microbiol Ecol
, vol.50
, pp. 231-243
-
-
Massana, R.1
Balagué, V.2
Guillou, L.3
Pedrós-Alió, C.4
-
40
-
-
2942558424
-
Phylogenetic and ecological analysis of novel marine stramenopiles
-
Massana R, Castresana J, Balagué V, Guillou L, Romari K, Groisillier A, Valentin K & Pedrós-Alió C (2004b) Phylogenetic and ecological analysis of novel marine stramenopiles. Appl Environ Microbiol 70: 3528-3534.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 3528-3534
-
-
Massana, R.1
Castresana, J.2
Balagué, V.3
Guillou, L.4
Romari, K.5
Groisillier, A.6
Valentin, K.7
Pedrós-Alió, C.8
-
41
-
-
33746757776
-
Distribution and abundance of uncultured heterotrophic flagellates in the world oceans
-
Massana R, Terrado R, Forn I, Lovejoy C & Pedrós-Alió C (2006) Distribution and abundance of uncultured heterotrophic flagellates in the world oceans. Environ Microbiol 8: 1515-1522.
-
(2006)
Environ Microbiol
, vol.8
, pp. 1515-1522
-
-
Massana, R.1
Terrado, R.2
Forn, I.3
Lovejoy, C.4
Pedrós-Alió, C.5
-
42
-
-
0035252376
-
Oceanic 18S rDNA sequences from picoplankton reveal unsuspected eukaryotic diversity
-
Moon-van der Staay SY, De Wachter R & Vaulot D (2001) Oceanic 18S rDNA sequences from picoplankton reveal unsuspected eukaryotic diversity. Nature 409: 607-610.
-
(2001)
Nature
, vol.409
, pp. 607-610
-
-
Moon-van der Staay, S.Y.1
De Wachter, R.2
Vaulot, D.3
-
43
-
-
0000822414
-
Optical modeling of the upper ocean in relation to its biogenous matter content (case I waters)
-
Morel A (1988) Optical modeling of the upper ocean in relation to its biogenous matter content (case I waters). J Geophys Res 93: 10749-10768.
-
(1988)
J Geophys Res
, vol.93
, pp. 10749-10768
-
-
Morel, A.1
-
45
-
-
47149108187
-
Successful cultivation of the toxic dinoflagellate Dinophysis caudata (Dinophyceae)
-
Nishitani G, Nagai S, Sakiyama S & Kamiyama T (2008) Successful cultivation of the toxic dinoflagellate Dinophysis caudata (Dinophyceae). Plankton Benthos Res 3: 78-85.
-
(2008)
Plankton Benthos Res
, vol.3
, pp. 78-85
-
-
Nishitani, G.1
Nagai, S.2
Sakiyama, S.3
Kamiyama, T.4
-
46
-
-
34247884488
-
Vertical distribution of picoeukaryotic diversity in the Sargasso Sea
-
Not F, Gausling R, Azam F, Heidelberg JF & Worden AZ (2007a) Vertical distribution of picoeukaryotic diversity in the Sargasso Sea. Environ Microbiol 9: 1233-1252.
-
(2007)
Environ Microbiol
, vol.9
, pp. 1233-1252
-
-
Not, F.1
Gausling, R.2
Azam, F.3
Heidelberg, J.F.4
Worden, A.Z.5
-
47
-
-
33846502698
-
Picobiliphytes: a marine picoplanktonic algal group with unknown affinities to other eukaryotes
-
Not F, Valentin K, Romari K, Lovejoy C, Massana R, Töbe K, Vaulot D & Medlin LK (2007b) Picobiliphytes: a marine picoplanktonic algal group with unknown affinities to other eukaryotes. Science 315: 253-255.
-
(2007)
Science
, vol.315
, pp. 253-255
-
-
Not, F.1
Valentin, K.2
Romari, K.3
Lovejoy, C.4
Massana, R.5
Töbe, K.6
Vaulot, D.7
Medlin, L.K.8
-
48
-
-
53349168564
-
Protistan assemblages across the Indian Ocean, with a specific emphasis on the picoeukaryotes
-
Not F, Latasa M, Scharek R et al. (2008) Protistan assemblages across the Indian Ocean, with a specific emphasis on the picoeukaryotes. Deep Sea Res Part 1 Oceanogr Res Pap 55: 1456-1473.
-
(2008)
Deep Sea Res Part 1 Oceanogr Res Pap
, vol.55
, pp. 1456-1473
-
-
Not, F.1
Latasa, M.2
Scharek, R.3
-
49
-
-
70349382868
-
Molecular phylogeny and description of the novel katablepharid Roombia truncata gen. et sp. nov., and establishment of the Hacrobia taxon nov
-
Okamoto N, Chantangsi C, Horák A, Leander BS & Keeling PJ (2009) Molecular phylogeny and description of the novel katablepharid Roombia truncata gen. et sp. nov., and establishment of the Hacrobia taxon nov. PLoS ONE 4: e7080.
-
(2009)
PLoS ONE
, vol.4
, pp. e7080
-
-
Okamoto, N.1
Chantangsi, C.2
Horák, A.3
Leander, B.S.4
Keeling, P.J.5
-
50
-
-
85000006552
-
-
Vegan: community ecology package. R package version 2.0-7
-
Oksanen J, Blanchet FG, Kindt R, Legendre P, Minchin PR, O'Hara RB, Simpson GL, Solymos P, Stevens MHH & Wagnet H (2013) Vegan: community ecology package. R package version 2.0-7. http://cran.r-project.org/package=vegan.
-
(2013)
-
-
Oksanen, J.1
Blanchet, F.G.2
Kindt, R.3
Legendre, P.4
Minchin, P.R.5
O'Hara, R.B.6
Simpson, G.L.7
Solymos, P.8
Stevens, M.H.H.9
Wagnet, H.10
-
51
-
-
79960558703
-
Protistan microbial observatory in the Cariaco Basin, Caribbean. II. Habitat specialization
-
Orsi W, Edgcomb V, Jeon S, Leslin C, Bunge J, Taylor GT, Varela R & Epstein S (2011) Protistan microbial observatory in the Cariaco Basin, Caribbean. II. Habitat specialization. ISME J 5: 1357-1373.
-
(2011)
ISME J
, vol.5
, pp. 1357-1373
-
-
Orsi, W.1
Edgcomb, V.2
Jeon, S.3
Leslin, C.4
Bunge, J.5
Taylor, G.T.6
Varela, R.7
Epstein, S.8
-
52
-
-
84874311437
-
General patterns of diversity in major marine microeukaryote lineages
-
Pernice MC, Logares R, Guillou L & Massana R (2013) General patterns of diversity in major marine microeukaryote lineages. PLoS ONE 8: e57170.
-
(2013)
PLoS ONE
, vol.8
, pp. e57170
-
-
Pernice, M.C.1
Logares, R.2
Guillou, L.3
Massana, R.4
-
53
-
-
0037310350
-
The correlation between rDNA copy number and genome size in eukaryotes
-
Prokopowich CD, Gregory TR & Crease TJ (2003) The correlation between rDNA copy number and genome size in eukaryotes. Genome 46: 48-50.
-
(2003)
Genome
, vol.46
, pp. 48-50
-
-
Prokopowich, C.D.1
Gregory, T.R.2
Crease, T.J.3
-
54
-
-
84973418649
-
-
R Foundation for Statistical Computing, Vienna, Austria
-
R Development Core Team (2013) R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna, Austria. http://www.r-project.org/.
-
(2013)
R: A Language and Environment for Statistical Computing
-
-
-
55
-
-
84897918131
-
Phylogenetic composition and distribution of picoeukaryotes in the hypoxic northwestern coast of the Gulf of Mexico
-
Rocke E, Jing H & Liu H (2013) Phylogenetic composition and distribution of picoeukaryotes in the hypoxic northwestern coast of the Gulf of Mexico. Microbiologyopen 2: 130-143.
-
(2013)
Microbiologyopen
, vol.2
, pp. 130-143
-
-
Rocke, E.1
Jing, H.2
Liu, H.3
-
56
-
-
2942562373
-
Composition and temporal variability of picoeukaryote communities at a coastal site of the English Channel from 18S rDNA sequences
-
Romari K & Vaulot D (2004) Composition and temporal variability of picoeukaryote communities at a coastal site of the English Channel from 18S rDNA sequences. Limnol Oceanogr 49: 784-798.
-
(2004)
Limnol Oceanogr
, vol.49
, pp. 784-798
-
-
Romari, K.1
Vaulot, D.2
-
57
-
-
84860109324
-
MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space
-
Ronquist F, Teslenko M, van der Mark P et al. (2012) MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol 61: 539-542.
-
(2012)
Syst Biol
, vol.61
, pp. 539-542
-
-
Ronquist, F.1
Teslenko, M.2
van der Mark, P.3
-
58
-
-
85000196723
-
-
Ocean data view
-
Schlitzer R (2011) Ocean data view. http://odv.awi.de.
-
(2011)
-
-
Schlitzer, R.1
-
59
-
-
72949107142
-
Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities
-
Schloss PD, Westcott SL, Ryabin T et al. (2009) Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl Environ Microbiol 75: 7537-7541.
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 7537-7541
-
-
Schloss, P.D.1
Westcott, S.L.2
Ryabin, T.3
-
60
-
-
78349241135
-
Depth matters: microbial eukaryote diversity and community structure in the eastern North Pacific revealed through environmental gene libraries
-
Schnetzer A, Moorthi SD, Countway PD, Gast RJ, Gilg IC & Caron DA (2011) Depth matters: microbial eukaryote diversity and community structure in the eastern North Pacific revealed through environmental gene libraries. Deep Sea Res Part 1 Oceanogr Res Pap 58: 16-26.
-
(2011)
Deep Sea Res Part 1 Oceanogr Res Pap
, vol.58
, pp. 16-26
-
-
Schnetzer, A.1
Moorthi, S.D.2
Countway, P.D.3
Gast, R.J.4
Gilg, I.C.5
Caron, D.A.6
-
61
-
-
84875425357
-
Picomonas judraskeda gen. et sp. nov.: the first identified member of the Picozoa phylum nov., a widespread group of picoeukaryotes, formerly known as "picobiliphytes"
-
Seenivasan R, Sausen N, Medlin LK & Melkonian M (2013) Picomonas judraskeda gen. et sp. nov.: the first identified member of the Picozoa phylum nov., a widespread group of picoeukaryotes, formerly known as "picobiliphytes". PLoS ONE 8: e59565.
-
(2013)
PLoS ONE
, vol.8
, pp. e59565
-
-
Seenivasan, R.1
Sausen, N.2
Medlin, L.K.3
Melkonian, M.4
-
62
-
-
70449589699
-
Groups without cultured representatives dominate eukaryotic picophytoplankton in the oligotrophic South East Pacific Ocean
-
Shi XL, Marie D, Jardillier L, Scanlan DJ & Vaulot D (2009) Groups without cultured representatives dominate eukaryotic picophytoplankton in the oligotrophic South East Pacific Ocean. PLoS ONE 4: e7657.
-
(2009)
PLoS ONE
, vol.4
, pp. e7657
-
-
Shi, X.L.1
Marie, D.2
Jardillier, L.3
Scanlan, D.J.4
Vaulot, D.5
-
63
-
-
84874684845
-
New haptophyte lineages and multiple independent colonizations of freshwater ecosystems
-
Simon M, López-García P, Moreira D & Jardillier L (2013) New haptophyte lineages and multiple independent colonizations of freshwater ecosystems. Environ Microbiol Rep 5: 322-332.
-
(2013)
Environ Microbiol Rep
, vol.5
, pp. 322-332
-
-
Simon, M.1
López-García, P.2
Moreira, D.3
Jardillier, L.4
-
64
-
-
27944463121
-
Phylogenetic position of the copepod-infesting parasite Syndinium turbo (Dinoflagellata, Syndinea)
-
Skovgaard A, Massana R, Balagué V & Saiz E (2005) Phylogenetic position of the copepod-infesting parasite Syndinium turbo (Dinoflagellata, Syndinea). Protist 156: 413-423.
-
(2005)
Protist
, vol.156
, pp. 413-423
-
-
Skovgaard, A.1
Massana, R.2
Balagué, V.3
Saiz, E.4
-
65
-
-
84876942639
-
Choice of pore size can introduce artefacts when filtering picoeukaryotes for molecular biodiversity studies
-
Sørensen N, Daugbjerg N & Richardson K (2013) Choice of pore size can introduce artefacts when filtering picoeukaryotes for molecular biodiversity studies. Microb Ecol 65: 964-968.
-
(2013)
Microb Ecol
, vol.65
, pp. 964-968
-
-
Sørensen, N.1
Daugbjerg, N.2
Richardson, K.3
-
66
-
-
77951908579
-
Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water
-
Stoeck T, Bass D, Nebel M, Christen R, Jones MDM, Breiner H-W & Richards TA (2010) Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water. Mol Ecol 19: 21-31.
-
(2010)
Mol Ecol
, vol.19
, pp. 21-31
-
-
Stoeck, T.1
Bass, D.2
Nebel, M.3
Christen, R.4
Jones, M.D.M.5
Breiner, H.-W.6
Richards, T.A.7
-
67
-
-
33745409983
-
Phylogenetic affinities of an enigmatic nannoplankton, Braarudosphaera bigelowii based on the SSU rDNA sequences
-
Takano Y, Hagino K, Tanaka Y, Horiguchi T & Okada H (2006) Phylogenetic affinities of an enigmatic nannoplankton, Braarudosphaera bigelowii based on the SSU rDNA sequences. Mar Micropaleontol 60: 145-156.
-
(2006)
Mar Micropaleontol
, vol.60
, pp. 145-156
-
-
Takano, Y.1
Hagino, K.2
Tanaka, Y.3
Horiguchi, T.4
Okada, H.5
-
68
-
-
84891163637
-
Mixotrophic haptophytes are key bacterial grazers in oligotrophic coastal waters
-
Unrein F, Gasol JM, Not F, Forn I & Massana R (2014) Mixotrophic haptophytes are key bacterial grazers in oligotrophic coastal waters. ISME J 8: 164-176.
-
(2014)
ISME J
, vol.8
, pp. 164-176
-
-
Unrein, F.1
Gasol, J.M.2
Not, F.3
Forn, I.4
Massana, R.5
-
69
-
-
0036603651
-
Are autotrophs less diverse than heterotrophs in marine picoplankton?
-
Vaulot D, Romari K & Not F (2002) Are autotrophs less diverse than heterotrophs in marine picoplankton? Trends Microbiol 10: 266-267.
-
(2002)
Trends Microbiol
, vol.10
, pp. 266-267
-
-
Vaulot, D.1
Romari, K.2
Not, F.3
-
70
-
-
33746451235
-
Picoeukaryote diversity in coastal waters of the Pacific Ocean
-
Worden AZ (2006) Picoeukaryote diversity in coastal waters of the Pacific Ocean. Aquat Microb Ecol 43: 165-175.
-
(2006)
Aquat Microb Ecol
, vol.43
, pp. 165-175
-
-
Worden, A.Z.1
-
71
-
-
0742319983
-
Assessing the dynamics and ecology of marine picophytoplankton: the importance of the eukaryotic component
-
Worden AZ, Nolan JK & Palenik B (2004) Assessing the dynamics and ecology of marine picophytoplankton: the importance of the eukaryotic component. Limnol Oceanogr 49: 168-179.
-
(2004)
Limnol Oceanogr
, vol.49
, pp. 168-179
-
-
Worden, A.Z.1
Nolan, J.K.2
Palenik, B.3
-
72
-
-
84987652788
-
Photosynthetic picoeukaryote assemblages in the South China Sea from the Pearl River estuary to the SEATS station
-
Wu W, Huang B & Zhong C (2014) Photosynthetic picoeukaryote assemblages in the South China Sea from the Pearl River estuary to the SEATS station. Aquat Microb Ecol 71: 271-284.
-
(2014)
Aquat Microb Ecol
, vol.71
, pp. 271-284
-
-
Wu, W.1
Huang, B.2
Zhong, C.3
-
73
-
-
7644221250
-
Genetic diversity of small eukaryotes from the coastal waters of Nansha Islands in China
-
Yuan J, Chen M-Y, Shao P, Zhou H, Chen Y-Q & Qu L-H (2004) Genetic diversity of small eukaryotes from the coastal waters of Nansha Islands in China. FEMS Microbiol Lett 240: 163-170.
-
(2004)
FEMS Microbiol Lett
, vol.240
, pp. 163-170
-
-
Yuan, J.1
Chen, M.-Y.2
Shao, P.3
Zhou, H.4
Chen, Y.-Q.5
Qu, L.-H.6
|