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Volumn 84, Issue 2, 2014, Pages 386-398

Targeted Combinatorial Alternative Splicing Generates Brain Region-Specific Repertoires of Neurexins

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA; MESSENGER RNA; NEUREXIN; NEUREXIN 1 ALPHA; NEUREXIN 1 BETA; NEUREXIN 2 ALPHA; NEUREXIN 2 BETA; NEUREXIN 3 ALPHA; NEUREXIN 3 BETA; SYNAPSE RECEPTOR; UNCLASSIFIED DRUG; ISOPROTEIN; NERVE PROTEIN;

EID: 84908240641     PISSN: 08966273     EISSN: 10974199     Source Type: Journal    
DOI: 10.1016/j.neuron.2014.09.011     Document Type: Article
Times cited : (144)

References (46)
  • 2
    • 84879970825 scopus 로고    scopus 로고
    • Presynaptic neurexin-3 alternative splicing trans-synaptically controls postsynaptic AMPA receptor trafficking
    • Aoto J., Martinelli D.C., Malenka R.C., Tabuchi K., Südhof T.C. Presynaptic neurexin-3 alternative splicing trans-synaptically controls postsynaptic AMPA receptor trafficking. Cell 2013, 154:75-88.
    • (2013) Cell , vol.154 , pp. 75-88
    • Aoto, J.1    Martinelli, D.C.2    Malenka, R.C.3    Tabuchi, K.4    Südhof, T.C.5
  • 3
    • 37049027105 scopus 로고    scopus 로고
    • Structures of neuroligin-1 and the neuroligin-1/neurexin-1 beta complex reveal specific protein-protein and protein-Ca2+ interactions
    • Araç D., Boucard A.A., Ozkan E., Strop P., Newell E., Südhof T.C., Brunger A.T. Structures of neuroligin-1 and the neuroligin-1/neurexin-1 beta complex reveal specific protein-protein and protein-Ca2+ interactions. Neuron 2007, 56:992-1003.
    • (2007) Neuron , vol.56 , pp. 992-1003
    • Araç, D.1    Boucard, A.A.2    Ozkan, E.3    Strop, P.4    Newell, E.5    Südhof, T.C.6    Brunger, A.T.7
  • 5
    • 77953237956 scopus 로고    scopus 로고
    • SnapShot: neuroligin-neurexin complexes
    • Baudouin S., Scheiffele P. SnapShot: neuroligin-neurexin complexes. Cell 2010, 141:908-908.e1.
    • (2010) Cell , vol.141 , pp. 908-908.e1
    • Baudouin, S.1    Scheiffele, P.2
  • 6
    • 26944444692 scopus 로고    scopus 로고
    • A splice code for trans-synaptic cell adhesion mediated by binding of neuroligin 1 to alpha- and beta-neurexins
    • Boucard A.A., Chubykin A.A., Comoletti D., Taylor P., Südhof T.C. A splice code for trans-synaptic cell adhesion mediated by binding of neuroligin 1 to alpha- and beta-neurexins. Neuron 2005, 48:229-236.
    • (2005) Neuron , vol.48 , pp. 229-236
    • Boucard, A.A.1    Chubykin, A.A.2    Comoletti, D.3    Taylor, P.4    Südhof, T.C.5
  • 7
    • 84866266717 scopus 로고    scopus 로고
    • Mapping single molecule sequencing reads using basic local alignment with successive refinement (BLASR): application and theory
    • Chaisson M.J., Tesler G. Mapping single molecule sequencing reads using basic local alignment with successive refinement (BLASR): application and theory. BMC Bioinformatics 2012, 13:238.
    • (2012) BMC Bioinformatics , vol.13 , pp. 238
    • Chaisson, M.J.1    Tesler, G.2
  • 8
    • 84880953033 scopus 로고    scopus 로고
    • Clustered protocadherins
    • Chen W.V., Maniatis T. Clustered protocadherins. Development 2013, 140:3297-3302.
    • (2013) Development , vol.140 , pp. 3297-3302
    • Chen, W.V.1    Maniatis, T.2
  • 9
    • 37849021314 scopus 로고    scopus 로고
    • Structural basis for synaptic adhesion mediated by neuroligin-neurexin interactions
    • Chen X., Liu H., Shim A.H., Focia P.J., He X. Structural basis for synaptic adhesion mediated by neuroligin-neurexin interactions. Nat. Struct. Mol. Biol. 2008, 15:50-56.
    • (2008) Nat. Struct. Mol. Biol. , vol.15 , pp. 50-56
    • Chen, X.1    Liu, H.2    Shim, A.H.3    Focia, P.J.4    He, X.5
  • 10
    • 79958159261 scopus 로고    scopus 로고
    • The structure of neurexin 1α reveals features promoting a role as synaptic organizer
    • Chen F., Venugopal V., Murray B., Rudenko G. The structure of neurexin 1α reveals features promoting a role as synaptic organizer. Structure 2011, 19:779-789.
    • (2011) Structure , vol.19 , pp. 779-789
    • Chen, F.1    Venugopal, V.2    Murray, B.3    Rudenko, G.4
  • 11
    • 33745994650 scopus 로고    scopus 로고
    • Alternative splicing controls selective trans-synaptic interactions of the neuroligin-neurexin complex
    • Chih B., Gollan L., Scheiffele P. Alternative splicing controls selective trans-synaptic interactions of the neuroligin-neurexin complex. Neuron 2006, 51:171-178.
    • (2006) Neuron , vol.51 , pp. 171-178
    • Chih, B.1    Gollan, L.2    Scheiffele, P.3
  • 16
    • 33846962479 scopus 로고    scopus 로고
    • Multivariate analysis and visualization of splicing correlations in single-gene transcriptomes
    • Emerick M.C., Parmigiani G., Agnew W.S. Multivariate analysis and visualization of splicing correlations in single-gene transcriptomes. BMC Bioinformatics 2007, 8:16.
    • (2007) BMC Bioinformatics , vol.8 , pp. 16
    • Emerick, M.C.1    Parmigiani, G.2    Agnew, W.S.3
  • 17
    • 34447092677 scopus 로고    scopus 로고
    • The EJC factor eIF4AIII modulates synaptic strength and neuronal protein expression
    • Giorgi C., Yeo G.W., Stone M.E., Katz D.B., Burge C., Turrigiano G., Moore M.J. The EJC factor eIF4AIII modulates synaptic strength and neuronal protein expression. Cell 2007, 130:179-191.
    • (2007) Cell , vol.130 , pp. 179-191
    • Giorgi, C.1    Yeo, G.W.2    Stone, M.E.3    Katz, D.B.4    Burge, C.5    Turrigiano, G.6    Moore, M.J.7
  • 18
    • 11144352245 scopus 로고    scopus 로고
    • Neurexins induce differentiation of GABA and glutamate postsynaptic specializations via neuroligins
    • Graf E.R., Zhang X., Jin S.X., Linhoff M.W., Craig A.M. Neurexins induce differentiation of GABA and glutamate postsynaptic specializations via neuroligins. Cell 2004, 119:1013-1026.
    • (2004) Cell , vol.119 , pp. 1013-1026
    • Graf, E.R.1    Zhang, X.2    Jin, S.X.3    Linhoff, M.W.4    Craig, A.M.5
  • 19
    • 77957893329 scopus 로고    scopus 로고
    • Apparent non-canonical trans-splicing is generated by reverse transcriptase invitro
    • Houseley J., Tollervey D. Apparent non-canonical trans-splicing is generated by reverse transcriptase invitro. PLoS ONE 2010, 5:e12271.
    • (2010) PLoS ONE , vol.5 , pp. e12271
    • Houseley, J.1    Tollervey, D.2
  • 21
    • 84893467539 scopus 로고    scopus 로고
    • Neuronal cell type-specific alternative splicing is regulated by the KH domain protein SLM1
    • Iijima T., Iijima Y., Witte H., Scheiffele P. Neuronal cell type-specific alternative splicing is regulated by the KH domain protein SLM1. J.Cell Biol. 2014, 204:331-342.
    • (2014) J.Cell Biol. , vol.204 , pp. 331-342
    • Iijima, T.1    Iijima, Y.2    Witte, H.3    Scheiffele, P.4
  • 24
    • 20444368053 scopus 로고    scopus 로고
    • Neuronal proteins custom designed by alternative splicing
    • Lipscombe D. Neuronal proteins custom designed by alternative splicing. Curr. Opin. Neurobiol. 2005, 15:358-363.
    • (2005) Curr. Opin. Neurobiol. , vol.15 , pp. 358-363
    • Lipscombe, D.1
  • 25
    • 72849144434 scopus 로고    scopus 로고
    • Sequencing technologies - the next generation
    • Metzker M.L. Sequencing technologies - the next generation. Nat. Rev. Genet. 2010, 11:31-46.
    • (2010) Nat. Rev. Genet. , vol.11 , pp. 31-46
    • Metzker, M.L.1
  • 27
    • 79958143403 scopus 로고    scopus 로고
    • The crystal structure of the α-neurexin-1 extracellular region reveals a hinge point for mediating synaptic adhesion and function
    • Miller M.T., Mileni M., Comoletti D., Stevens R.C., Harel M., Taylor P. The crystal structure of the α-neurexin-1 extracellular region reveals a hinge point for mediating synaptic adhesion and function. Structure 2011, 19:767-778.
    • (2011) Structure , vol.19 , pp. 767-778
    • Miller, M.T.1    Mileni, M.2    Comoletti, D.3    Stevens, R.C.4    Harel, M.5    Taylor, P.6
  • 29
    • 84889571423 scopus 로고    scopus 로고
    • Probabilistic splicing of Dscam1 establishes identity at the level of single neurons
    • Miura S.K., Martins A., Zhang K.X., Graveley B.R., Zipursky S.L. Probabilistic splicing of Dscam1 establishes identity at the level of single neurons. Cell 2013, 155:1166-1177.
    • (2013) Cell , vol.155 , pp. 1166-1177
    • Miura, S.K.1    Martins, A.2    Zhang, K.X.3    Graveley, B.R.4    Zipursky, S.L.5
  • 30
    • 33745144588 scopus 로고    scopus 로고
    • The problem of neuronal cell types: a physiological genomics approach
    • Nelson S.B., Sugino K., Hempel C.M. The problem of neuronal cell types: a physiological genomics approach. Trends Neurosci. 2006, 29:339-345.
    • (2006) Trends Neurosci. , vol.29 , pp. 339-345
    • Nelson, S.B.1    Sugino, K.2    Hempel, C.M.3
  • 32
    • 84895772316 scopus 로고    scopus 로고
    • Polymorphic receptors: neuronal functions and molecular mechanisms of diversification
    • Schreiner D., Nguyen T.M., Scheiffele P. Polymorphic receptors: neuronal functions and molecular mechanisms of diversification. Curr. Opin. Neurobiol. 2014, 27C:25-30.
    • (2014) Curr. Opin. Neurobiol. , vol.27 C , pp. 25-30
    • Schreiner, D.1    Nguyen, T.M.2    Scheiffele, P.3
  • 33
    • 77955433630 scopus 로고    scopus 로고
    • Genetics and cell biology of building specific synaptic connectivity
    • Shen K., Scheiffele P. Genetics and cell biology of building specific synaptic connectivity. Annu. Rev. Neurosci. 2010, 33:473-507.
    • (2010) Annu. Rev. Neurosci. , vol.33 , pp. 473-507
    • Shen, K.1    Scheiffele, P.2
  • 34
    • 77953206739 scopus 로고    scopus 로고
    • LRRTMs and neuroligins bind neurexins with a differential code to cooperate in glutamate synapse development
    • Siddiqui T.J., Pancaroglu R., Kang Y., Rooyakkers A., Craig A.M. LRRTMs and neuroligins bind neurexins with a differential code to cooperate in glutamate synapse development. J.Neurosci. 2010, 30:7495-7506.
    • (2010) J.Neurosci. , vol.30 , pp. 7495-7506
    • Siddiqui, T.J.1    Pancaroglu, R.2    Kang, Y.3    Rooyakkers, A.4    Craig, A.M.5
  • 35
    • 78651127719 scopus 로고
    • Chemoaffinity in the orderly growth of nerve fiber patterns and connections
    • Sperry R.W. Chemoaffinity in the orderly growth of nerve fiber patterns and connections. Proc. Natl. Acad. Sci. USA 1963, 50:703-710.
    • (1963) Proc. Natl. Acad. Sci. USA , vol.50 , pp. 703-710
    • Sperry, R.W.1
  • 36
    • 84880331416 scopus 로고    scopus 로고
    • Ultra-deep profiling of alternatively spliced Drosophila Dscam isoforms by circularization-assisted multi-segment sequencing
    • Sun W., You X., Gogol-Döring A., He H., Kise Y., Sohn M., Chen T., Klebes A., Schmucker D., Chen W. Ultra-deep profiling of alternatively spliced Drosophila Dscam isoforms by circularization-assisted multi-segment sequencing. EMBO J. 2013, 32:2029-2038.
    • (2013) EMBO J. , vol.32 , pp. 2029-2038
    • Sun, W.1    You, X.2    Gogol-Döring, A.3    He, H.4    Kise, Y.5    Sohn, M.6    Chen, T.7    Klebes, A.8    Schmucker, D.9    Chen, W.10
  • 37
    • 0036270811 scopus 로고    scopus 로고
    • Structure and evolution of neurexin genes: insight into the mechanism of alternative splicing
    • Tabuchi K., Südhof T.C. Structure and evolution of neurexin genes: insight into the mechanism of alternative splicing. Genomics 2002, 79:849-859.
    • (2002) Genomics , vol.79 , pp. 849-859
    • Tabuchi, K.1    Südhof, T.C.2
  • 39
    • 84897528076 scopus 로고    scopus 로고
    • Cartography of neurexin alternative splicing mapped by single-molecule long-read mRNA sequencing
    • Treutlein B., Gokce O., Quake S.R., Sudhof T.C. Cartography of neurexin alternative splicing mapped by single-molecule long-read mRNA sequencing. Proc. Natl. Acad. Sci. USA 2014, 111:E1291-E1299.
    • (2014) Proc. Natl. Acad. Sci. USA , vol.111 , pp. E1291-E1299
    • Treutlein, B.1    Gokce, O.2    Quake, S.R.3    Sudhof, T.C.4
  • 40
    • 77953725365 scopus 로고    scopus 로고
    • Trans-synaptic interaction of GluRdelta2 and Neurexin through Cbln1 mediates synapse formation in the cerebellum
    • Uemura T., Lee S.J., Yasumura M., Takeuchi T., Yoshida T., Ra M., Taguchi R., Sakimura K., Mishina M. Trans-synaptic interaction of GluRdelta2 and Neurexin through Cbln1 mediates synapse formation in the cerebellum. Cell 2010, 141:1068-1079.
    • (2010) Cell , vol.141 , pp. 1068-1079
    • Uemura, T.1    Lee, S.J.2    Yasumura, M.3    Takeuchi, T.4    Yoshida, T.5    Ra, M.6    Taguchi, R.7    Sakimura, K.8    Mishina, M.9
  • 41
    • 0027292233 scopus 로고
    • Neurexin III alpha: extensive alternative splicing generates membrane-bound and soluble forms
    • Ushkaryov Y.A., Südhof T.C. Neurexin III alpha: extensive alternative splicing generates membrane-bound and soluble forms. Proc. Natl. Acad. Sci. USA 1993, 90:6410-6414.
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 6410-6414
    • Ushkaryov, Y.A.1    Südhof, T.C.2
  • 42
    • 0026769035 scopus 로고
    • Neurexins: synaptic cell surface proteins related to the alpha-latrotoxin receptor and laminin
    • Ushkaryov Y.A., Petrenko A.G., Geppert M., Südhof T.C. Neurexins: synaptic cell surface proteins related to the alpha-latrotoxin receptor and laminin. Science 1992, 257:50-56.
    • (1992) Science , vol.257 , pp. 50-56
    • Ushkaryov, Y.A.1    Petrenko, A.G.2    Geppert, M.3    Südhof, T.C.4
  • 43
    • 4444318773 scopus 로고    scopus 로고
    • Alternative splicing of Drosophila Dscam generates axon guidance receptors that exhibit isoform-specific homophilic binding
    • Wojtowicz W.M., Flanagan J.J., Millard S.S., Zipursky S.L., Clemens J.C. Alternative splicing of Drosophila Dscam generates axon guidance receptors that exhibit isoform-specific homophilic binding. Cell 2004, 118:619-633.
    • (2004) Cell , vol.118 , pp. 619-633
    • Wojtowicz, W.M.1    Flanagan, J.J.2    Millard, S.S.3    Zipursky, S.L.4    Clemens, J.C.5
  • 44
    • 18744383071 scopus 로고    scopus 로고
    • GMAP: a genomic mapping and alignment program for mRNA and EST sequences
    • Wu T.D., Watanabe C.K. GMAP: a genomic mapping and alignment program for mRNA and EST sequences. Bioinformatics 2005, 21:1859-1875.
    • (2005) Bioinformatics , vol.21 , pp. 1859-1875
    • Wu, T.D.1    Watanabe, C.K.2
  • 45
    • 84880946307 scopus 로고    scopus 로고
    • Alternative pre-mRNA splicing in neurons: growing up and extending its reach
    • Zheng S., Black D.L. Alternative pre-mRNA splicing in neurons: growing up and extending its reach. Trends Genet. 2013, 29:442-448.
    • (2013) Trends Genet. , vol.29 , pp. 442-448
    • Zheng, S.1    Black, D.L.2
  • 46
    • 77958450147 scopus 로고    scopus 로고
    • Chemoaffinity revisited: dscams, protocadherins, and neural circuit assembly
    • Zipursky S.L., Sanes J.R. Chemoaffinity revisited: dscams, protocadherins, and neural circuit assembly. Cell 2010, 143:343-353.
    • (2010) Cell , vol.143 , pp. 343-353
    • Zipursky, S.L.1    Sanes, J.R.2


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