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Volumn 17, Issue 10, 2014, Pages 1299-1309

Nitrogen as a key regulator of flowering in Fagus crenata: Understanding the physiological mechanism of masting by gene expression analysis

Author keywords

AP1; Floral initiation; Floral transition; Flowering; FT; Gene expression; Gene network; Intermittent reproduction; LFY; Life cycle; Resource budget model

Indexed keywords

FAGUS CRENATA;

EID: 84908236583     PISSN: 1461023X     EISSN: 14610248     Source Type: Journal    
DOI: 10.1111/ele.12338     Document Type: Article
Times cited : (88)

References (50)
  • 1
    • 77954912138 scopus 로고    scopus 로고
    • Robust control of the seasonal expression of the Arabidopsis FLC gene in a fluctuating environment
    • Aikawa, S., Kobayashi, M.J., Satake, A., Shimizu, K.K. & Kudoh, H. (2010). Robust control of the seasonal expression of the Arabidopsis FLC gene in a fluctuating environment. Proc. Natl Acad. Sci. USA, 107, 11632-11637.
    • (2010) Proc. Natl Acad. Sci. USA , vol.107 , pp. 11632-11637
    • Aikawa, S.1    Kobayashi, M.J.2    Satake, A.3    Shimizu, K.K.4    Kudoh, H.5
  • 2
    • 77950420409 scopus 로고    scopus 로고
    • Seasonal and developmental timing of flowering
    • Amasino, R. (2010). Seasonal and developmental timing of flowering. Plant J., 61, 1001-1013.
    • (2010) Plant J. , vol.61 , pp. 1001-1013
    • Amasino, R.1
  • 3
    • 84865272275 scopus 로고    scopus 로고
    • The genetic basis of flowering responses to seasonal cues
    • Andrés, F. & Coupland, G. (2012). The genetic basis of flowering responses to seasonal cues. Nat. Rev. Genet., 13, 627-639.
    • (2012) Nat. Rev. Genet. , vol.13 , pp. 627-639
    • Andrés, F.1    Coupland, G.2
  • 4
    • 33646529634 scopus 로고    scopus 로고
    • The timing of developmental transitions in plants
    • Bäurle, I. & Dean, C. (2006). The timing of developmental transitions in plants. Cell, 125, 655-664.
    • (2006) Cell , vol.125 , pp. 655-664
    • Bäurle, I.1    Dean, C.2
  • 5
    • 33646720488 scopus 로고    scopus 로고
    • CO/FT regulatory module controls timing of flowering and seasonal growth cessation in trees
    • Böhlenius, H., Huang, T., Charbonnel-Campaa, L., Brunner, A.M., Jansson, S., Strauss, S.H. et al. (2006). CO/FT regulatory module controls timing of flowering and seasonal growth cessation in trees. Science, 312, 1040-1043.
    • (2006) Science , vol.312 , pp. 1040-1043
    • Böhlenius, H.1    Huang, T.2    Charbonnel-Campaa, L.3    Brunner, A.M.4    Jansson, S.5    Strauss, S.H.6
  • 6
    • 0032447801 scopus 로고    scopus 로고
    • Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana
    • Clough, S.J. & Bent, A.F. (1998). Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J., 16, 735-743.
    • (1998) Plant J. , vol.16 , pp. 735-743
    • Clough, S.J.1    Bent, A.F.2
  • 7
    • 70350057445 scopus 로고    scopus 로고
    • How do plants know when other plants are flowering? Resource depletion, pollen limitation and mastseeding in a perennial wildflower
    • Crone, E., Miller, E. & Sala, A. (2009). How do plants know when other plants are flowering? Resource depletion, pollen limitation and mastseeding in a perennial wildflower. Ecol. Lett., 12, 1119-1126.
    • (2009) Ecol. Lett. , vol.12 , pp. 1119-1126
    • Crone, E.1    Miller, E.2    Sala, A.3
  • 9
    • 0029415997 scopus 로고
    • Acid deposition: perspectives in time and space
    • Galloway, J.N. (1995). Acid deposition: perspectives in time and space. Water Air Soil Pollut., 85, 15-24.
    • (1995) Water Air Soil Pollut. , vol.85 , pp. 15-24
    • Galloway, J.N.1
  • 10
    • 51149107605 scopus 로고    scopus 로고
    • Masting in Fagus crenata and its influence on the nitrogen content and dry mass of winter buds
    • Han, Q., Kabeya, D., Iio, A. & Kakubari, Y. (2008). Masting in Fagus crenata and its influence on the nitrogen content and dry mass of winter buds. Tree Physiol., 28, 1269-2376.
    • (2008) Tree Physiol. , vol.28 , pp. 1269-2376
    • Han, Q.1    Kabeya, D.2    Iio, A.3    Kakubari, Y.4
  • 11
    • 84897601199 scopus 로고    scopus 로고
    • Nitrogen storage dynamics are affected by masting events in Fagus crenata
    • Han, Q., Kabeya, D., Iio, A., Inagaki, Y. & Kakubari, Y. (2014). Nitrogen storage dynamics are affected by masting events in Fagus crenata. Oecologia, 174, 679-687.
    • (2014) Oecologia , vol.174 , pp. 679-687
    • Han, Q.1    Kabeya, D.2    Iio, A.3    Inagaki, Y.4    Kakubari, Y.5
  • 12
    • 36148975426 scopus 로고
    • Initiation and development of flower buds in Fagus crenata Blume
    • in Japanese with English Summary
    • Hashizume, H. (1983). Initiation and development of flower buds in Fagus crenata Blume. Stud. Broadleaf Trees, 2, 41-47. (in Japanese with English Summary).
    • (1983) Stud. Broadleaf Trees , vol.2 , pp. 41-47
    • Hashizume, H.1
  • 13
    • 0031582636 scopus 로고    scopus 로고
    • How does masting happen and synchronize? J
    • Isagi, Y., Sugimura, K., Sumida, A. & Ito, H. (1997). How does masting happen and synchronize? J. Theor. Biol., 187, 231-239.
    • (1997) Theor. Biol. , vol.187 , pp. 231-239
    • Isagi, Y.1    Sugimura, K.2    Sumida, A.3    Ito, H.4
  • 14
    • 0038674021 scopus 로고    scopus 로고
    • Resprouting ability of Quercus crispula seedlings depends on the vegetation cover of their microhabitats
    • Kabeya, D., Sakai, A., Matsui, K. & Sakai, S. (2003). Resprouting ability of Quercus crispula seedlings depends on the vegetation cover of their microhabitats. J. Plant. Res., 116, 207-216.
    • (2003) J. Plant. Res. , vol.116 , pp. 207-216
    • Kabeya, D.1    Sakai, A.2    Matsui, K.3    Sakai, S.4
  • 16
    • 0028165061 scopus 로고
    • The evolutionary ecology of mast seeding
    • Kelly, D. (1994). The evolutionary ecology of mast seeding. Trends Ecol. Evol., 9, 465-470.
    • (1994) Trends Ecol. Evol. , vol.9 , pp. 465-470
    • Kelly, D.1
  • 17
    • 0036913927 scopus 로고    scopus 로고
    • Mast seeding in perennial plants: why, how, where? Annu
    • Kelly, D. & Sork, V.L. (2002). Mast seeding in perennial plants: why, how, where? Annu. Rev. Ecol. Syst., 33, 427-447.
    • (2002) Rev. Ecol. Syst. , vol.33 , pp. 427-447
    • Kelly, D.1    Sork, V.L.2
  • 18
    • 84870934450 scopus 로고    scopus 로고
    • Of mast and mean: differential-temperature cue makes mast seeding insensitive to climate change
    • Kelly, D., Geldenhuis, A., James, A., Holland, E.P., Plank, M.J., Brockie, R.E. et al. (2013). Of mast and mean: differential-temperature cue makes mast seeding insensitive to climate change. Ecol. Lett., 16, 90-98.
    • (2013) Ecol. Lett. , vol.16 , pp. 90-98
    • Kelly, D.1    Geldenhuis, A.2    James, A.3    Holland, E.P.4    Plank, M.J.5    Brockie, R.E.6
  • 19
    • 0033520985 scopus 로고    scopus 로고
    • A pair of related genes with antagonistic roles in mediating flowering signals
    • Kobayashi, Y., Kaya, H., Goto, K., Iwabuchi, M. & Araki, T. (1999). A pair of related genes with antagonistic roles in mediating flowering signals. Science, 286, 1960-1962.
    • (1999) Science , vol.286 , pp. 1960-1962
    • Kobayashi, Y.1    Kaya, H.2    Goto, K.3    Iwabuchi, M.4    Araki, T.5
  • 20
    • 84883744420 scopus 로고    scopus 로고
    • Mass flowering of the tropical tree Shorea beccariana was preceded by expression changes in flowering and drought-responsive genes
    • Kobayashi, M.J., Takeuchi, Y., Kenta, T., Kume, T., Diway, B. & Shimizu, K.K. (2013). Mass flowering of the tropical tree Shorea beccariana was preceded by expression changes in flowering and drought-responsive genes. Mol. Ecol., 22, 4767-4782.
    • (2013) Mol. Ecol. , vol.22 , pp. 4767-4782
    • Kobayashi, M.J.1    Takeuchi, Y.2    Kenta, T.3    Kume, T.4    Diway, B.5    Shimizu, K.K.6
  • 21
    • 36148948202 scopus 로고    scopus 로고
    • Experimental investigation on weather cues for mast seeding of Fagus crenata
    • Kon, H. & Noda, T. (2007). Experimental investigation on weather cues for mast seeding of Fagus crenata. Ecol. Res., 22, 802-806.
    • (2007) Ecol. Res. , vol.22 , pp. 802-806
    • Kon, H.1    Noda, T.2
  • 22
    • 84908240415 scopus 로고    scopus 로고
    • Mechanism of mast seeding in Fagus crenata
    • eds Terazawa, K. & Koyama, H., Bun-ichi Sogo Shuppan Co., Tokyo, Japan, in Japanese
    • Kon, H. & Noda, T. (2008). Mechanism of mast seeding in Fagus crenata. In: Applied Ecology for Restoration of Beech Forests (eds Terazawa, K. & Koyama, H.). Bun-ichi Sogo Shuppan Co., Tokyo, Japan, pp. 35-51 (in Japanese).
    • (2008) Applied Ecology for Restoration of Beech Forests , pp. 35-51
    • Kon, H.1    Noda, T.2
  • 23
    • 33744815268 scopus 로고    scopus 로고
    • Proximate factors causing mast seeding in Fagus crenata: the effects of resource level and weather cues
    • Kon, H., Noda, T., Terazawa, K., Koyama, H. & Yasaka, M. (2005). Proximate factors causing mast seeding in Fagus crenata: the effects of resource level and weather cues. Can. J. Bot., 83, 1402-1409.
    • (2005) Can. J. Bot. , vol.83 , pp. 1402-1409
    • Kon, H.1    Noda, T.2    Terazawa, K.3    Koyama, H.4    Yasaka, M.5
  • 24
    • 77952943097 scopus 로고    scopus 로고
    • Molecular characterization of FLOWERING LOCUS T-Like genes of apple (Malus 9 domestica Borkh.)
    • Kotoda, N., Hayashi, H., Suzuki, M., Igarashi, M., Hatsuyama, Y., Kidou, S. et al. (2010). Molecular characterization of FLOWERING LOCUS T-Like genes of apple (Malus 9 domestica Borkh.). Plant Cell Physiol., 51, 561-575.
    • (2010) Plant Cell Physiol. , vol.51 , pp. 561-575
    • Kotoda, N.1    Hayashi, H.2    Suzuki, M.3    Igarashi, M.4    Hatsuyama, Y.5    Kidou, S.6
  • 25
    • 0242381269 scopus 로고    scopus 로고
    • Duplication and diversification in the APETALA1/FRUITFULL floral homeotic gene lineage: implications for the evolution of floral development
    • Litt, A. & Irish, V.F. (2003). Duplication and diversification in the APETALA1/FRUITFULL floral homeotic gene lineage: implications for the evolution of floral development. Genetics, 165, 821-833.
    • (2003) Genetics , vol.165 , pp. 821-833
    • Litt, A.1    Irish, V.F.2
  • 26
    • 0029147855 scopus 로고
    • A gene triggering flower formation in Arabidopsis
    • Mandel, M.A. & Yanofsky, M.F. (1995). A gene triggering flower formation in Arabidopsis. Nature, 377, 522-524.
    • (1995) Nature , vol.377 , pp. 522-524
    • Mandel, M.A.1    Yanofsky, M.F.2
  • 28
    • 0036593923 scopus 로고    scopus 로고
    • Allocation of resources to reproduction in Styrax obassia in a masting year
    • Miyazaki, Y., Hiura, T., Kato, E. & Funada, R. (2002). Allocation of resources to reproduction in Styrax obassia in a masting year. Ann. Bot., 89, 767-772.
    • (2002) Ann. Bot. , vol.89 , pp. 767-772
    • Miyazaki, Y.1    Hiura, T.2    Kato, E.3    Funada, R.4
  • 29
    • 84870911330 scopus 로고    scopus 로고
    • Deciphering and prediction of transcriptome dynamics under fluctuating filed conditions
    • Nagano, J., Sato, Y., Mihara, M., Antonio, B.A., Motoyama, R., Ito, H. et al. (2012). Deciphering and prediction of transcriptome dynamics under fluctuating filed conditions. Cell, 151, 1358-1369.
    • (2012) Cell , vol.151 , pp. 1358-1369
    • Nagano, J.1    Sato, Y.2    Mihara, M.3    Antonio, B.A.4    Motoyama, R.5    Ito, H.6
  • 30
    • 34547677722 scopus 로고    scopus 로고
    • Development of series of gateway binary vectors, pGWBs, for realizing efficient construction of fusion genes for plant transformation
    • Nakagawa, T., Kurose, T., Hino, T., Tanaka, K., Kawamukai, M., Niwa, Y. et al. (2007). Development of series of gateway binary vectors, pGWBs, for realizing efficient construction of fusion genes for plant transformation. J. Biosci. Bioeng., 104, 34-41.
    • (2007) J. Biosci. Bioeng. , vol.104 , pp. 34-41
    • Nakagawa, T.1    Kurose, T.2    Hino, T.3    Tanaka, K.4    Kawamukai, M.5    Niwa, Y.6
  • 31
    • 74549114845 scopus 로고    scopus 로고
    • Differences in seasonal expression of flowering genes between deciduous trifoliate orange and evergreen Satsuma mandarin
    • Nishikawa, F., Endo, T., Shimada, T., Fujii, H., Shimizu, T. & Omura, M. (2009). Differences in seasonal expression of flowering genes between deciduous trifoliate orange and evergreen Satsuma mandarin. Tree Physiol., 29, 921-926.
    • (2009) Tree Physiol. , vol.29 , pp. 921-926
    • Nishikawa, F.1    Endo, T.2    Shimada, T.3    Fujii, H.4    Shimizu, T.5    Omura, M.6
  • 32
    • 38849188764 scopus 로고    scopus 로고
    • Effects of weather conditions on mast year frequency in beech (Fagus sylvatica L.) in Sweden
    • Övergaard, R., Gemmel, P. & Karlsson, M. (2007). Effects of weather conditions on mast year frequency in beech (Fagus sylvatica L.) in Sweden. Forestry, 80, 555-565.
    • (2007) Forestry , vol.80 , pp. 555-565
    • Övergaard, R.1    Gemmel, P.2    Karlsson, M.3
  • 33
    • 84892668609 scopus 로고    scopus 로고
    • Cues versus proximate drivers: testing the mechanism behind masting behavior
    • Pearse, I.S., Koenig, W.D. & Knops, M.H. (2014). Cues versus proximate drivers: testing the mechanism behind masting behavior. Oikos, 123, 179-184.
    • (2014) Oikos , vol.123 , pp. 179-184
    • Pearse, I.S.1    Koenig, W.D.2    Knops, M.H.3
  • 34
    • 17344392308 scopus 로고    scopus 로고
    • A new mathematical model for relative quantification in real-time RT-PCR
    • Pfaffl, M.W. (2001). A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res., 29, e45.
    • (2001) Nucleic Acids Res. , vol.29 , pp. e45
    • Pfaffl, M.W.1
  • 35
    • 0034696448 scopus 로고    scopus 로고
    • Pollen coupling of forest trees: forming synchronized and periodic reproduction out of chaos
    • Satake, A. & Iwasa, Y. (2000). Pollen coupling of forest trees: forming synchronized and periodic reproduction out of chaos. J. Theor. Biol., 203, 63-84.
    • (2000) J. Theor. Biol. , vol.203 , pp. 63-84
    • Satake, A.1    Iwasa, Y.2
  • 36
    • 84883058527 scopus 로고    scopus 로고
    • Forecasting flowering phenology under climate warming by modelling regulatory dynamics of flowering-time genes
    • Satake, A., Kawagoe, T., Saburi, Y., Chiba, Y., Sakurai, G. & Kudoh, H. (2013). Forecasting flowering phenology under climate warming by modelling regulatory dynamics of flowering-time genes. Nat. Commun., 4, 2303. DOI: 10.1038/ncomms3303.
    • (2013) Nat. Commun. , vol.4 , pp. 2303
    • Satake, A.1    Kawagoe, T.2    Saburi, Y.3    Chiba, Y.4    Sakurai, G.5    Kudoh, H.6
  • 37
    • 0346888548 scopus 로고    scopus 로고
    • Dissection of floral induction pathways using global expression analysis
    • Schmid, M., Uhlenhaut, N.H., Godard, F., Demar, M., Bressan, R., Weigel, D. et al. (2003). Dissection of floral induction pathways using global expression analysis. Development, 130, 6001-6012.
    • (2003) Development , vol.130 , pp. 6001-6012
    • Schmid, M.1    Uhlenhaut, N.H.2    Godard, F.3    Demar, M.4    Bressan, R.5    Weigel, D.6
  • 38
    • 84859768479 scopus 로고    scopus 로고
    • Oases:robust de novo RNA-seq assembly across the dynamic range of expression levels
    • Schulz, M.H., Zerbino, D.R., Vingron, M. & Birney, E. (2012). Oases:robust de novo RNA-seq assembly across the dynamic range of expression levels. Bioinformatics, 28, 1086-1092.
    • (2012) Bioinformatics , vol.28 , pp. 1086-1092
    • Schulz, M.H.1    Zerbino, D.R.2    Vingron, M.3    Birney, E.4
  • 39
    • 26944454449 scopus 로고    scopus 로고
    • Role of FRIGIDA and FLOWERING LOCUS C in determining variation in flowering time of Arabidopsis
    • Shindo, C., Aranzana, M.J., Lister, C., Baxter, C., Nicholls, C., Nordborg, M. et al. (2005). Role of FRIGIDA and FLOWERING LOCUS C in determining variation in flowering time of Arabidopsis. Plant Physiol., 138, 1163-1173.
    • (2005) Plant Physiol. , vol.138 , pp. 1163-1173
    • Shindo, C.1    Aranzana, M.J.2    Lister, C.3    Baxter, C.4    Nicholls, C.5    Nordborg, M.6
  • 40
    • 84982009984 scopus 로고
    • The evolutionary ecology of mast seeding in trees
    • Silverton, J.W. (1980). The evolutionary ecology of mast seeding in trees. Biol. J. Linn. Soc., 14, 235-250.
    • (1980) Biol. J. Linn. Soc. , vol.14 , pp. 235-250
    • Silverton, J.W.1
  • 41
    • 79954487431 scopus 로고    scopus 로고
    • Climate cues and resources interact to determine seed production by a masting species
    • Smaill, J.S., Clinton, P.W., Allen, R.B. & Davis, M.R. (2011). Climate cues and resources interact to determine seed production by a masting species. J. Ecol., 99, 870-877.
    • (2011) J. Ecol. , vol.99 , pp. 870-877
    • Smaill, J.S.1    Clinton, P.W.2    Allen, R.B.3    Davis, M.R.4
  • 42
    • 1842584810 scopus 로고    scopus 로고
    • A latitudinal cline in flowering time in Arabidopsis thaliana modulated by the flowering time gene FRIGIDA
    • Stinchcombe, J.R., Weinig, C., Ungerer, M., Olsen, K.M., Mays, C., Halldorsdottir, S.S. et al. (2004). A latitudinal cline in flowering time in Arabidopsis thaliana modulated by the flowering time gene FRIGIDA. Proc. Natl Acad. Sci. USA, 101, 4712-4717.
    • (2004) Proc. Natl Acad. Sci. USA , vol.101 , pp. 4712-4717
    • Stinchcombe, J.R.1    Weinig, C.2    Ungerer, M.3    Olsen, K.M.4    Mays, C.5    Halldorsdottir, S.S.6
  • 43
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M. & Kumar, S. (2011). MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol., 28, 2731-2739.
    • (2011) Mol. Biol. Evol. , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 44
    • 84860250345 scopus 로고    scopus 로고
    • Soil nutrient supply modulates temperature-induction cues in mast-seeding grasses
    • Tanentzap, A.J., Lee, W.G. & Coomes, D.A. (2012). Soil nutrient supply modulates temperature-induction cues in mast-seeding grasses. Ecology, 93, 462-469.
    • (2012) Ecology , vol.93 , pp. 462-469
    • Tanentzap, A.J.1    Lee, W.G.2    Coomes, D.A.3
  • 45
    • 0027968068 scopus 로고
    • Clustal-W:improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J.D., Higgins, D.G. & Gibson, T.J. (1994). Clustal-W:improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res., 22, 4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 47
    • 78549274321 scopus 로고    scopus 로고
    • Gene networks controlling the initiation of flower development
    • Wellmer, F. & Riechmann, J.L. (2010). Gene networks controlling the initiation of flower development. Trends Genet., 26i, 519-527.
    • (2010) Trends Genet. , vol.26 I , pp. 519-527
    • Wellmer, F.1    Riechmann, J.L.2
  • 48
    • 23644440652 scopus 로고    scopus 로고
    • Integration of spatial and temporal information during floral induction in Arabidopsis
    • Wigge, P.A., Kim, M.C., Jaeger, K.E., Busch, W., Schmid, M., Lohmann, J.U. et al. (2005). Integration of spatial and temporal information during floral induction in Arabidopsis. Science, 309, 1056-1059.
    • (2005) Science , vol.309 , pp. 1056-1059
    • Wigge, P.A.1    Kim, M.C.2    Jaeger, K.E.3    Busch, W.4    Schmid, M.5    Lohmann, J.U.6
  • 49
    • 0043241743 scopus 로고    scopus 로고
    • Masting behavior of Fagus crenata in northern Japan: spatial synchrony and pre-dispersal seed predation
    • Yasaka, M., Terazawa, K., Koyama, H. & Kon, H. (2003). Masting behavior of Fagus crenata in northern Japan: spatial synchrony and pre-dispersal seed predation. For. Ecol. Manage., 184, 277-284.
    • (2003) For. Ecol. Manage. , vol.184 , pp. 277-284
    • Yasaka, M.1    Terazawa, K.2    Koyama, H.3    Kon, H.4
  • 50
    • 43149115851 scopus 로고    scopus 로고
    • Velvet: algorithms for de novo short read assembly using de Bruijn graphs
    • Zerbino, D.R. & Birney, E. (2008). Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res., 18, 821-829.
    • (2008) Genome Res. , vol.18 , pp. 821-829
    • Zerbino, D.R.1    Birney, E.2


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