Impact of rice cultivar and organ on elemental composition of phytoliths and the release of bio-available silicon

Frontiers in Plant Science

Volumn 5, Issue OCT, 2014, Pages

  Li, Zimin ^a   Song, Zhaoliang ^a,b   Cornelis, Jean Thomas ^c  

^a ZHEJIANG A F UNIVERSITY   (China)

^b INSTITUTE OF GEOCHEMISTRY   (China)

^c UNIVERSITÉ CATHOLIQUE DE LOUVAIN   (Belgium)

Author keywords

PhytOC; Phytolith; Rice; Silicon solubility; Soil plant systems

Indexed keywords

EID: 84907970896     PISSN: None     EISSN: 1664462X     Source Type: Journal    
DOI: 10.3389/fpls.2014.00529     Document Type: Article

References (54)

1. Alexandre, A., Meunier, J. D., Colin, F., and Koud, J. M. (1997). Plant impact on the biogeochemical cycle of silicon and related weathering processes. Geochim. Cosmochim. Acta 61, 677–682. doi: 10.1016/S0016-7037(97)00001-X
2. Alvarez, J., and Datnoff, L. E. (2001). The economic potential of silicon for integrated management and sustainable rice production. Crop Protect. 20, 43–48. doi: 10.1016/S0261-2194(00)00051-X
3. Bartoli, F. (1985). Crystallochemistry and surface properties of biogenic opal. J. Soil Sci. 36, 335–350.
4. Bartoli, F., and Wilding, L. P. (1980). Dissolution of biogenic opal as a function of its physical and chemical properties. Soil Sci. Soc. Am. J. 44, 873–878.
5. Berthelsen, S., Noble, A., and Garside, A. (2001). “Silicon research down under: past, present, and future,” in Silicon in Agriculture, eds L. E. Datnoff, G. H. Snyder, and G. H. Korndörfer (Amsterdam: Elsevier Sciences), 241–255.
6. Blecker, S. W., McCulley, R. L., Chadwick, O. A., and Kelly, E. F. (2006). Biologic cycling of silica across a grassland bioclimosequence. Glob. Biogeochem. Cycles 20, 1–11. doi: 10.1029/2006GB002690
7. Buck, G. B., Korndörfer, G. H., and Datnoff, L. E. (2010). Extractors for estimating plant available silicon from potential silicon fertilizer sources. J. Plant Nutr. 34, 272–282. doi: 10.1080/01904167.2011.533327
8. Cao, Z. H., Yang, L. Z., Lin, X. G., Hu, Z. Y., Dong, Y. H., Zhang, G. Y., et al. (2007). Morphological characteristics of paddy fields, paddy soil profile, phytoliths and fossil rice grain of the Neolithic age in Yangtze River Delta. Acta Pedolgica Sinica 44, 839–847 (In Chinese).
9. Clarke, J. (2003). The occurrence and significance of biogenic opal in the regolith. Earth Sci. Rev. 60, 175–194. doi: 10.1016/S0012-8252(02)00092-2
10. Cornelis, J. T., Delvaux, B., and Titeux, H. (2010). Contrasting silicon uptakes by coniferous trees: a hydroponic experiment on young seedlings. Plant Soil 336, 99–106. doi: 10.1007/s11104-010-0451-x
11. Cornelis, J. T., Titeux, H., Ranger, J., and Delvaux, B. (2011). Identification and distribution of the readily soluble silicon pool in a temperate forest soil below three distinct tree species. Plant Soil 342, 369–378. doi: 10.1007/s11104-010-0702-x
12. Dove, P. M. (1995). Kinetic and thermodynamic controls on silica reactivity in weathering environments. Rev. Mineral. Geochem. 31, 235–290.
13. Epstein, E. (1994). The anomaly of silicon in plant biology. Proc. Natl. Acad. Sci. U.S.A. 91, 11–17. doi: 10.1073/pnas.91.1.11
14. Epstein, E. (1999). Silicon. Ann. Rev. Plant Physiol. Plant Mol. Biol. 50, 641–644 doi: 10.1146/annurev.arplant.50.1.641
15. Fraysse, F., Pokrovsky, O. S., and Meunier, J. D. (2010). Experimental study of terrestrial plant litter interaction with aqueous solutions. Geochim. Cosmochim. Acta 74, 70–84. doi: 10.1016/j.gca.2009.09.002
16. Fraysse, F., Pokrovsky, O. S., Schott, J., and Meunier, J.-D. (2009). Surface chemistry and reactivity of plant phytoliths in aqueous solutions. Chem. Geol. 258, 197–206. doi: 10.1016/j.chemgeo.2008.10.003
17. Haysom, M. B. C., and Chapman, L. S. (1975). Some aspects of the calcium silicate trials at Mackay. Proc. Aust. Sugar Cane Technol. 42, 117–122.
18. Henriet, C., Draye, X., Dorel, M., Bodarwe, L., and Delvaux, B. (2008). Leaf silicon content in banana (Musa spp.) reveals the weathering stage of volcanic ash soils in Guadeloupe. Plant Soil 313, 71–82. doi: 10.1007/s11104-008-9680-7
19. Hodson, M. J., White, P. J., Mead, A., and Broadley, M. R. (2005). Phylogenetic variation in the silicon composition of plants. Ann. Bot. 96, 1027–1046. doi: 10.1093/aob/mci255
20. Houben, D., Sonnet, P., and Cornelis, J. T. (2014). Biochar from Miscanthus: a potential silicon fertilizer. Plant Soil 374, 871–882. doi: 10.1007/s11104-013-1885-8
21. Jones, L. H. P., and Milne, A. A. (1963). Studies of silica in the oat plant. Plant Soil 43, 207–220. doi: 10.1007/BF01347875
22. Kameník, J., Mizera, J., and Øanda, Z. (2013). Chemical composition of plant silica phytoliths. Environ. Chem. Lett. 11, 189–195. doi: 10.1007/s10311-012-0396-9
23. Li, D. D., Lerman, A., and Mackenzie, F. T. (2011). Human perturbations on the global biogeochemical cycles of coupled Si–C and responses of terrestrial processes and the coastal ocean. Appl. Geochem. 26, S289–S291. doi: 10.1016/j.apgeochem.2011.03.084
24. Li, Z. M., Song, Z. L., Parr, J. F., and Wang, H. L. (2013). Occluded C in rice phy-toliths: implications to biogeochemical carbon sequestration. Plant Soil 370, 615–623. doi: 10.1007/s11104-013-1661-9
25. Liang, Y. C., Sun, W. C., Zhu, Y. G., and Peter, C. (2007). Mechanisms of silicon-mediated alleviation of abiotic stresses in higher plants: a review. Environ. Pollut. 147, 422–428. doi: 10.1016/j.envpol.2006.06.008
26. Liu, X., Li, L., Bian, R., Chen, D., Qu, J., Kibue, G. W., et al. (2014). Effect of biochar amendment on soil-silicon availability and rice uptake. J. Plant Nutr. Soil Sci. 177, 91–96. doi: 10.1002/jpln.201200582
27. Lu, R. K. (2000). Methods of Soil and Agrochemical Analysis. Beijing: China Agriculture Press.
28. Lu, H. Y., Wu, N. Q., Yang, X. D., Jiang, H., Liu, K. B., and Liu T. S. (2006). Phytoliths as quantitative indicators for the reconstruction of past environmental conditions in China I: phytolith-based transfer functions. Quat. Sci. Rev. 25, 945–959. doi: 10.1016/j.quascirev.2005.07.014
29. Ma, J. F. (2003). “Functions of silicon in higher plants,” in Silicon Biomineralization, ed W. E. G. Müller (Berlin: Springer Verlag), 127–148.
30. Marschner, H. (1995). Mineral Nutrition of Higher Plants, 2nd Edn. London: Academic Press.
31. Mecfel, J., Hinke, S., Goedel, W. A., Marx, G., Fehlhaber, R., and Baucker, E. (2007). Effectofsiliconfertilizers on siliconaccumulation in wheat. J. Plant Nutr. Soil Sci. 170, 769–772. doi: 10.1002/jpln.200625038
32. Narayanaswamy, C., and Prakash, N. B. (2010). Evaluation of selected extractants for plant-available silicon in rice soils of southern India. Commun. Soil Sci. Plant Anal. 41, 977–989. doi: 10.1080/00103621003646063
33. Oldenburg, C. M., Torn, M. S., De Angelis, K. M., Ajo-Franklin, J. B., Amundson, R. G., and Bernacchi, C. J., et al. (2008). “Biologically enhanced carbon sequestration: research needs and opportunities,” in Report on the Energy Biosciences Institute Workshop on Biologically Enhanced Carbon Sequestration (Berkeley, CA).
34. Parr, J. F., and Sullivan, L. A. (2005). Soil carbon sequestration in phytoliths. Soil Biol. Biochem. 37, 117–124. doi: 10.1016/j.soilbio.2004.06.013
35. Parr, J. F., and Sullivan, L. A. (2011). Phytolith occluded carbon and silica variability in wheat cultivars. Plant Soil 342, 165–171. doi: 10.1007/s11104-010-0680-z
36. Parr, J. F., Sullivan, L. A., Chen, B., and Ye, G. (2010). Carbon bio-sequestration within the phytoliths of economic bamboo species. Glob. Change Biol. 16, 2661–2667. doi: 10.1111/j.1365-2486.2009.02118.x
37. Piperno, D. R. (1988). Phytolith Analysis: An Archaeological and Geological Perspective. London: Academic Press.
38. Piperno, D. R. (2006). Phytoliths: A Comprehensive Guide for Archaeologists and Paleoecologists. Oxford: Altamira Press.
39. Piperno, D. R., Holst, I., Wessel-Beaver, L., and Andres, T. C. (2002). Evidence for the control of phytolith formation in Cucurbita fruits by the hard rind (Hr) genetic locus: archaeological and ecological implications. Proc. Natl. Acad. Sci. U.S.A. 99, 10923–10928. doi: 10.1073/pnas.152275499
40. Raven, J. A., and Giordano, M. (2009). Biomineralization by photosynthetic organisms: evidence of coevolution of the organisms and their environment? Geobiology 7, 140–154. doi: 10.1111/j.1472-4669.2008.00181.x
41. Saccone, L., Conley, D. J., and Sauer, D. (2006). Methodologies for amorphous silica analysis. J. Geochem. Explor. 88, 235–238. doi: 10.1016/j.gexplo.2005.08.045
42. Salekdeh, G. H., Siopongco, J., Wade, L. J., Ghareyazie, B., and Bennett, J. (2002). A proteomic approach to analyzing drought- and salt-responsiveness in rice. Field Crops Res. 76, 199–219. doi: 10.1016/S0378-4290(02)00040-0
43. SAS Institute. (1989). SAS/STAT User’s Guide. Version 6, 4th Edn. Cary, NC: SAS Institute.
44. Sauer, D., Saccone, L., Conley, D. J., Herrmann, L., and Sommer, M. (2006). Review of methodologies for extracting plant-available and amorphous Si from soils and aquatic sediments. Biogeochemistry 80, 89–108. doi: 10.1007/s10533-005-5879-3
45. Savant, N. K., Datnoff, L. E., and Snyder, G. H. (1997). Depletion of plant-available silicon in soils: a possible cause of declining rice yields 1. Commun. Soil Sci. Plant Anal. 28, 1245–1252. doi: 10.1080/00103629709369870
46. Song, Z. L., Wang, H. L., Strong, P. J., Li, Z. M., and Jiang, P. K. (2012). Plant impact on the coupled terrestrial biogeochemical cycles of silicon and carbon: implications for biogeochemical carbon sequestration. Earth-Sci. Rev. 155, 319–331. doi: 10.1016/j.earscirev.2012.09.006
47. Street-Perrott, F. A., and Barker, P. A. (2008). Biogenic silica: a neglected component of the coupled global continental biogeochemical cycles of carbon and silicon. Earth Surf. Process. Landf. 33, 1436–1457. doi: 10.1002/esp.1712
48. van Bennekom, A. J., Fred Jansen, J. H., van der Gaast, S. J., van Iperen, J. M., and Pieters, J. (1989). Aluminium-rich opal: an intermediate in the preservation of biogenic silica in the Zaire (Congo) deep-sea fan. Deep Sea Res. 36, 173–190. doi: 10.1016/0198-0149(89)90132-5
49. Walkley, A., and Black, I. A. (1934). An examination of the Degtjareff method for determining soil organic matter, and a proposed modification of the chromic acid titration method. Soil Sci. 37, 29–38.
50. Wang, Y. (1998). A study on the chemical composition of phytoliths. J. Oceanogr. HuanghaiBohai Seas 16, 33–38 (in Chinese with English abstract).
51. Wang, Y., and Lü, H. (1993). Study and Application of Phytoliths. Peking: Ocean Press. (in Chinese).
52. Wedepohl, H. K. (1995). The composition of the continental crust. Geochim. Cosmochim. Acta 59, 1217–1232. doi: 10.1016/0016-7037(95)00038-2
53. Wilding, L. P. (1967). Radiocarbon dating of biogenetic opal. Science 156, 66–67. doi: 10.1126/science.156.3771.66
54. Wilding, L. P., Brown, R. E., and Holowaychuk, N. N. (1967). Accessibility and properties of occluded carbon in biogenic opal. Soil Sci. 103, 56–61. doi: 10.1097/00010694-196701000-00009