Structure of the GH1 domain of guanylate kinase-associated protein from Rattus norvegicus

Biochemical and Biophysical Research Communications

Volumn 452, Issue 1, 2014, Pages 130-135

  Tong, Junsen ^a   Yang, Huiseon ^a   Eom, Soo Hyun ^b   Chun, Changju ^a   Im, Young Jun ^a  

^a Chonnam National University   (South Korea)

^b School of Life Sciences   (South Korea)

Author keywords

GKAP; Helix bundle; Protein structure; Protein protein interaction; Synaptic scaffolding protein; X ray crystallography

Indexed keywords

GUANYLATE KINASE ASSOCIATED PROTEIN; MALTOSE BINDING PROTEIN; SCAFFOLD PROTEIN; UNCLASSIFIED DRUG; GUANYLATE KINASE;

ARTICLE; CARBOXY TERMINAL SEQUENCE; CRYSTAL STRUCTURE; ISOTHERMAL TITRATION CALORIMETRY; PROTEIN DOMAIN; PROTEIN PROTEIN INTERACTION; PROTEIN STRUCTURE; RATTUS NORVEGICUS; AMINO ACID SEQUENCE; ANIMAL; CALORIMETRY; CHEMICAL STRUCTURE; CHEMISTRY; MOLECULAR GENETICS; PROTEIN CONFORMATION; PROTEIN TERTIARY STRUCTURE; RAT; SEQUENCE HOMOLOGY;

AMINO ACID SEQUENCE; ANIMALS; CALORIMETRY; GUANYLATE KINASE; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; PROTEIN CONFORMATION; PROTEIN STRUCTURE, TERTIARY; RATS; SEQUENCE HOMOLOGY, AMINO ACID;

EID: 84907812930     PISSN: 0006291X     EISSN: 10902104     Source Type: Journal    
DOI: 10.1016/j.bbrc.2014.08.073     Document Type: Article

References (19)

1. S. Naisbitt, E. Kim, R.J. Weinberg, A. Rao, F.C. Yang, A.M. Craig, and M. Sheng Characterization of guanylate kinase-associated protein, a postsynaptic density protein at excitatory synapses that interacts directly with postsynaptic density-95/synapse-associated protein 90 J. Neurosci. 17 1997 5687 5696
2. M. Sheng, and C.C. Hoogenraad The postsynaptic architecture of excitatory synapses: a more quantitative view Annu. Rev. Biochem. 76 2007 823 847
3. E. Kim, S. Naisbitt, Y.P. Hsueh, A. Rao, A. Rothschild, A.M. Craig, and M. Sheng GKAP, a novel synaptic protein that interacts with the guanylate kinase-like domain of the PSD-95/SAP90 family of channel clustering molecules J. Cell Biol. 136 1997 669 678
4. K. Hirao, Y. Hata, N. Ide, M. Takeuchi, M. Irie, I. Yao, M. Deguchi, A. Toyoda, T.C. Sudhof, and Y. Takai A novel multiple PDZ domain-containing molecule interacting with N-methyl-d-aspartate receptors and neuronal cell adhesion proteins J. Biol. Chem. 273 1998 21105 21110
5. S. Naisbitt, E. Kim, J.C. Tu, B. Xiao, C. Sala, J. Valtschanoff, R.J. Weinberg, P.F. Worley, and M. Sheng Shank, a novel family of postsynaptic density proteins that binds to the NMDA receptor/PSD-95/GKAP complex and cortactin Neuron 23 1999 569 582
6. S. Naisbitt, J. Valtschanoff, D.W. Allison, C. Sala, E. Kim, A.M. Craig, R.J. Weinberg, and M. Sheng Interaction of the postsynaptic density-95/guanylate kinase domain-associated protein complex with a light chain of myosin-V and dynein J. Neurosci. 20 2000 4524 4534
7. J.B. Manneville, M. Jehanno, and S. Etienne-Manneville Dlg1 binds GKAP to control dynein association with microtubules, centrosome positioning, and cell polarity J. Cell Biol. 191 2010 585 598
8. J.C. Tu, B. Xiao, S. Naisbitt, J.P. Yuan, R.S. Petralia, P. Brakeman, A. Doan, V.K. Aakalu, A.A. Lanahan, M. Sheng, and P.F. Worley Coupling of mGluR/Homer and PSD-95 complexes by the Shank family of postsynaptic density proteins Neuron 23 1999 583 592
9. A.Y. Hung, C.C. Sung, I.L. Brito, and M. Sheng Degradation of postsynaptic scaffold GKAP and regulation of dendritic spine morphology by the TRIM3 ubiquitin ligase in rat hippocampal neurons PLoS One 5 2010 e9842
10. S.M. Shin, N. Zhang, J. Hansen, N.Z. Gerges, D.T. Pak, M. Sheng, and S.H. Lee GKAP orchestrates activity-dependent postsynaptic protein remodeling and homeostatic scaling Nat. Neurosci. 15 2012 1655 1666
11. J. Tong, H. Yang, and Y.J. Im Crystallization and preliminary X-ray crystallographic analysis of the C-terminal domain of guanylate kinase-associated protein from Rattus norvegicus Acta Crystallogr. F Struct. Biol. Commun. 70 2014 949 954
12. M.D. Winn, C.C. Ballard, K.D. Cowtan, E.J. Dodson, P. Emsley, P.R. Evans, R.M. Keegan, E.B. Krissinel, A.G. Leslie, A. McCoy, S.J. McNicholas, G.N. Murshudov, N.S. Pannu, E.A. Potterton, H.R. Powell, R.J. Read, A. Vagin, and K.S. Wilson Overview of the CCP4 suite and current developments Acta Crystallogr. D Biol. Crystallogr. 67 2011 235 242
13. A. Vagin, and A. Teplyakov Molecular replacement with MOLREP Acta Crystallogr. D Biol. Crystallogr. 66 2010 22 25
14. A.J. Sharff, L.E. Rodseth, J.C. Spurlino, and F.A. Quiocho Crystallographic evidence of a large ligand-induced hinge-twist motion between the two domains of the maltodextrin binding protein involved in active transport and chemotaxis Biochemistry 31 1992 10657 10663
15. A.T. Brunger, P.D. Adams, G.M. Clore, W.L. DeLano, P. Gros, R.W. Grosse-Kunstleve, J.S. Jiang, J. Kuszewski, M. Nilges, N.S. Pannu, R.J. Read, L.M. Rice, T. Simonson, and G.L. Warren Crystallography & NMR system: a new software suite for macromolecular structure determination Acta Crystallogr. D Biol. Crystallogr. 54 1998 905 921
16. P. Emsley, B. Lohkamp, W.G. Scott, and K. Cowtan Features and development of Coot Acta Crystallogr. D Biol. Crystallogr. 66 2010 486 501
17. S.T. Arold, M.K. Hoellerer, and M.E. Noble The structural basis of localization and signaling by the focal adhesion targeting domain Structure 10 2002 319 327
18. Y.J. Im, G.B. Kang, J.H. Lee, K.R. Park, H.E. Song, E. Kim, W.K. Song, D. Park, and S.H. Eom Structural basis for asymmetric association of the betaPIX coiled coil and Shank PDZ J. Mol. Biol. 397 2010 457 466
19. Y.J. Im, J.H. Lee, S.H. Park, S.J. Park, S.H. Rho, G.B. Kang, E. Kim, and S.H. Eom Crystal structure of the Shank PDZ-ligand complex reveals a class I PDZ interaction and a novel PDZ-PDZ dimerization J. Biol. Chem. 278 2003 48099 48104