-
1
-
-
0030575840
-
Classification of nucleic acid junctions
-
Altona C (1996) Classification of nucleic acid junctions. J Mol Biol 263: 568–581.
-
(1996)
J Mol Biol
, vol.263
, pp. 568-581
-
-
Altona, C.1
-
2
-
-
80055098737
-
Three structure-selective endonucleases are essential in the absence of BLM helicase in Drosophila
-
Andersen SL, Kuo HK, Savukoski D, Brodsky MH, Sekelsky J (2011) Three structure-selective endonucleases are essential in the absence of BLM helicase in Drosophila. PLoS Genet 7: e1002315.
-
(2011)
PLoS Genet
, vol.7
, pp. e1002315
-
-
Andersen, S.L.1
Kuo, H.K.2
Savukoski, D.3
Brodsky, M.H.4
Sekelsky, J.5
-
3
-
-
30944466384
-
Arabidopsis RecQI4A suppresses homologous recombination and modulates DNA damage responses
-
Bagherieh-Najjar MB, de Vries OM, Hille J, Dijkwel PP (2005) Arabidopsis RecQI4A suppresses homologous recombination and modulates DNA damage responses. Plant J 43: 789–798.
-
(2005)
Plant J
, vol.43
, pp. 789-798
-
-
Bagherieh-Najjar, M.B.1
De Vries, O.M.2
Hille, J.3
Dijkwel, P.P.4
-
4
-
-
77957375933
-
The Caenorhabditis elegans homolog of Gen1/Yen1 resolvases links DNA damage signaling to DNA double-strand break repair
-
Bailly AP, Freeman A, Hall J, Déclais AC, Alpi A, Lilley DMJ, Ahmed S, Gartner A (2010) The Caenorhabditis elegans homolog of Gen1/Yen1 resolvases links DNA damage signaling to DNA double-strand break repair. PLoS Genet 6: e1001025.
-
(2010)
PLoS Genet
, vol.6
, pp. e1001025
-
-
Bailly, A.P.1
Freeman, A.2
Hall, J.3
Déclais, A.C.4
Alpi, A.5
Lilley, D.M.J.6
Ahmed, S.7
Gartner, A.8
-
5
-
-
0029087265
-
Structural analysis of the RuvC-Holliday junction complex reveals an unfolded junction
-
Bennett RJ, West SC (1995) Structural analysis of the RuvC-Holliday junction complex reveals an unfolded junction. J Mol Biol 252: 213–226.
-
(1995)
J Mol Biol
, vol.252
, pp. 213-226
-
-
Bennett, R.J.1
West, S.C.2
-
6
-
-
0029914126
-
Resolution of Holliday junctions in genetic recombination: RuvC protein nicks DNA at the point of strand exchange
-
Bennett RJ, West SC (1996) Resolution of Holliday junctions in genetic recombination: RuvC protein nicks DNA at the point of strand exchange. Proc Natl Acad Sci USA 93: 12217–12222.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 12217-12222
-
-
Bennett, R.J.1
West, S.C.2
-
7
-
-
0028050328
-
Substrate specificity of the Escherichia coli RuvC protein. Resolution of three- and four-stranded recombination intermediates
-
Benson FE, West SC (1994) Substrate specificity of the Escherichia coli RuvC protein. Resolution of three- and four-stranded recombination intermediates. J Biol Chem 269: 5195–5201.
-
(1994)
J Biol Chem
, vol.269
, pp. 5195-5201
-
-
Benson, F.E.1
West, S.C.2
-
9
-
-
34948885722
-
Crystal structure of T4 endonuclease VII resolving a Holliday junction
-
Biertümpfel C, Yang W, Suck D (2007) Crystal structure of T4 endonuclease VII resolving a Holliday junction. Nature 449: 616–620.
-
(2007)
Nature
, vol.449
, pp. 616-620
-
-
Biertümpfel, C.1
Yang, W.2
Suck, D.3
-
10
-
-
77949653925
-
Functional overlap between the structure-specific nucleases Yen1 and Mus81-Mms4 for DNA-damage repair in S. cerevisiae
-
Blanco MG, Matos J, Rass U, Ip SC, West SC (2010) Functional overlap between the structure-specific nucleases Yen1 and Mus81-Mms4 for DNA-damage repair in S. cerevisiae. DNA Repair (Amst) 9: 394–402.
-
(2010)
DNA Repair (Amst)
, vol.9
, pp. 394-402
-
-
Blanco, M.G.1
Matos, J.2
Rass, U.3
Ip, S.C.4
West, S.C.5
-
11
-
-
0035900652
-
Mus81-Eme1 are essential components of a Holliday junction resolvase
-
Boddy MN, Gaillard PH, McDonald WH, Shanahan P, Yates JR III, Russell P (2001) Mus81-Eme1 are essential components of a Holliday junction resolvase. Cell 107: 537–548.
-
(2001)
Cell
, vol.107
, pp. 537-548
-
-
Boddy, M.N.1
Gaillard, P.H.2
McDonald, W.H.3
Shanahan, P.4
Yates, J.I.5
Russell, P.6
-
12
-
-
84890097854
-
Different functions for the domains of the Arabidopsis thaliana RMI1 protein in DNA cross-link repair, somatic and meiotic recombination
-
Bonnet S, Knoll A, Hartung F, Puchta H (2013) Different functions for the domains of the Arabidopsis thaliana RMI1 protein in DNA cross-link repair, somatic and meiotic recombination. Nucleic Acids Res 41: 9349–9360.
-
(2013)
Nucleic Acids Res
, vol.41
, pp. 9349-9360
-
-
Bonnet, S.1
Knoll, A.2
Hartung, F.3
Puchta, H.4
-
13
-
-
77950862944
-
Double Holliday junctions are intermediates of DNA break repair
-
Bzymek M, Thayer NH, Oh SD, Kleckner N, Hunter N (2010) Double Holliday junctions are intermediates of DNA break repair. Nature 464: 937–941.
-
(2010)
Nature
, vol.464
, pp. 937-941
-
-
Bzymek, M.1
Thayer, N.H.2
Oh, S.D.3
Kleckner, N.4
Hunter, N.5
-
14
-
-
0035803394
-
Crystal structure of the fission yeast mitochondrial Holliday junction resolvase Ydc2
-
Ceschini S, Keeley A, McAlister MS, Oram M, Phelan J, Pearl LH, Tsaneva IR, Barrett TE (2001) Crystal structure of the fission yeast mitochondrial Holliday junction resolvase Ydc2. EMBO J 20: 6601–6611.
-
(2001)
EMBO J
, vol.20
, pp. 6601-6611
-
-
Ceschini, S.1
Keeley, A.2
McAlister, M.S.3
Oram, M.4
Phelan, J.5
Pearl, L.H.6
Tsaneva, I.R.7
Barrett, T.E.8
-
15
-
-
42149183549
-
Crystal structure of the Mus81-Eme1 complex
-
Chang JH, Kim JJ, Choi JM, Lee JH, Cho Y (2008) Crystal structure of the Mus81-Eme1 complex. Genes Dev 22: 1093–1106.
-
(2008)
Genes Dev
, vol.22
, pp. 1093-1106
-
-
Chang, J.H.1
Kim, J.J.2
Choi, J.M.3
Lee, J.H.4
Cho, Y.5
-
16
-
-
58149165028
-
The Arabidopsis BLAP75/Rmi1 homologue plays crucial roles in meiotic double-strand break repair
-
Chelysheva L, Vezon D, Belcram K, Gendrot G, Grelon M (2008) The Arabidopsis BLAP75/Rmi1 homologue plays crucial roles in meiotic double-strand break repair. PLoS Genet 4: e1000309.
-
(2008)
PLoS Genet
, vol.4
, pp. e1000309
-
-
Chelysheva, L.1
Vezon, D.2
Belcram, K.3
Gendrot, G.4
Grelon, M.5
-
17
-
-
35348986443
-
Binding and activation of DNA topoisomerase III by the Rmi1 subunit
-
Chen CF, Brill SJ (2007) Binding and activation of DNA topoisomerase III by the Rmi1 subunit. J Biol Chem 282: 28971–28979.
-
(2007)
J Biol Chem
, vol.282
, pp. 28971-28979
-
-
Chen, C.F.1
Brill, S.J.2
-
18
-
-
33845417763
-
Single Holliday junctions are intermediates of meiotic recombination
-
Cromie GA, Hyppa RW, Taylor AF, Zakharyevich K, Hunter N, Smith GR (2006) Single Holliday junctions are intermediates of meiotic recombination. Cell 127: 1167–1178.
-
(2006)
Cell
, vol.127
, pp. 1167-1178
-
-
Cromie, G.A.1
Hyppa, R.W.2
Taylor, A.F.3
Zakharyevich, K.4
Hunter, N.5
Smith, G.R.6
-
19
-
-
0034681277
-
Extensive central disruption of a four-way junction on binding CCE1 resolving enzyme
-
Déclais AC, Lilley DM (2000) Extensive central disruption of a four-way junction on binding CCE1 resolving enzyme. J Mol Biol 296: 421–433.
-
(2000)
J Mol Biol
, vol.296
, pp. 421-433
-
-
Déclais, A.C.1
Lilley, D.M.2
-
20
-
-
0023665172
-
The site-specific cleavage of synthetic Holliday junction analogs and related branched DNA structures by bacteriophage T7 endonuclease I
-
Dickie P, McFadden G, Morgan AR (1987) The site-specific cleavage of synthetic Holliday junction analogs and related branched DNA structures by bacteriophage T7 endonuclease I. J Biol Chem 262: 14826–14836.
-
(1987)
J Biol Chem
, vol.262
, pp. 14826-14836
-
-
Dickie, P.1
Mcfadden, G.2
Morgan, A.R.3
-
21
-
-
0028050325
-
Cloning, overexpression, purification, and characterization of the Escherichia coli RuvC Holliday junction resolvase
-
Dunderdale HJ, Sharples GJ, Lloyd RG, West SC (1994) Cloning, overexpression, purification, and characterization of the Escherichia coli RuvC Holliday junction resolvase. J Biol Chem 269: 5187–5194.
-
(1994)
J Biol Chem
, vol.269
, pp. 5187-5194
-
-
Dunderdale, H.J.1
Sharples, G.J.2
Lloyd, R.G.3
West, S.C.4
-
22
-
-
67649655402
-
Human SLX4 is a Holliday junction resolvase subunit that binds multiple DNA repair/ recombination endonucleases
-
Fekairi S, Scaglione S, Chahwan C, Taylor ER, Tissier A, Coulon S, Dong MQ, Ruse C, Yates JR III, Russell P, et al (2009) Human SLX4 is a Holliday junction resolvase subunit that binds multiple DNA repair/ recombination endonucleases. Cell 138: 78–89.
-
(2009)
Cell
, vol.138
, pp. 78-89
-
-
Fekairi, S.1
Scaglione, S.2
Chahwan, C.3
Taylor, E.R.4
Tissier, A.5
Coulon, S.6
Dong, M.Q.7
Ruse, C.8
Yates, J.I.9
Russell, P.10
-
23
-
-
0037273484
-
OsSEND-1: A new RAD2 nuclease family member in higher plants
-
Furukawa T, Kimura S, Ishibashi T, Mori Y, Hashimoto J, Sakaguchi K (2003) OsSEND-1: a new RAD2 nuclease family member in higher plants. Plant Mol Biol 51: 59–70.
-
(2003)
Plant Mol Biol
, vol.51
, pp. 59-70
-
-
Furukawa, T.1
Kimura, S.2
Ishibashi, T.3
Mori, Y.4
Hashimoto, J.5
Sakaguchi, K.6
-
24
-
-
0028033989
-
The yeast type I topoisomerase Top3 interacts with Sgsl, a DNA helicase homolog: A potential eukaryotic reverse gyrase
-
Gangloff S, McDonald JP, Bendixen C, Arthur L, Rothstein R (1994) The yeast type I topoisomerase Top3 interacts with Sgsl, a DNA helicase homolog: a potential eukaryotic reverse gyrase. Mol Cell Biol 14: 8391–8398.
-
(1994)
Mol Cell Biol
, vol.14
, pp. 8391-8398
-
-
Gangloff, S.1
Mcdonald, J.P.2
Bendixen, C.3
Arthur, L.4
Rothstein, R.5
-
25
-
-
84869208744
-
A novel role of human holliday junction resolvase GEN1 in the maintenance of centrosome integrity
-
Gao M, Rendtlew Danielsen J, Wei LZ, Zhou DP, Xu Q, Li MM, Wang ZQ, Tong WM, Yang YG (2012) A novel role of human holliday junction resolvase GEN1 in the maintenance of centrosome integrity. PLoS ONE 7: e49687.
-
(2012)
PLoS ONE
, vol.7
, pp. e49687
-
-
Gao, M.1
Rendtlew Danielsen, J.2
Wei, L.Z.3
Zhou, D.P.4
Xu, Q.5
Li, M.M.6
Wang, Z.Q.7
Tong, W.M.8
Yang, Y.G.9
-
26
-
-
84885855405
-
Human GEN1 and the SLX4-associated nucleases MUS81 and SLX1 are essential for the resolution of replication-induced Holliday junctions
-
Garner E, Kim Y, Lach FP, Kottemann MC, Smogorzewska A (2013) Human GEN1 and the SLX4-associated nucleases MUS81 and SLX1 are essential for the resolution of replication-induced Holliday junctions. Cell Reports 5: 207–215.
-
(2013)
Cell Reports
, vol.5
, pp. 207-215
-
-
Garner, E.1
Kim, Y.2
Lach, F.P.3
Kottemann, M.C.4
Smogorzewska, A.5
-
27
-
-
66649107495
-
Two distinct MUS81-EME1 complexes from Arabidopsis process Holliday junctions
-
Geuting V, Kobbe D, Hartung F, Dürr J, Focke M, Puchta H (2009) Two distinct MUS81-EME1 complexes from Arabidopsis process Holliday junctions. Plant Physiol 150: 1062–1071.
-
(2009)
Plant Physiol
, vol.150
, pp. 1062-1071
-
-
Geuting, V.1
Kobbe, D.2
Hartung, F.3
Dürr, J.4
Focke, M.5
Puchta, H.6
-
28
-
-
33750206776
-
The structure-specific endonuclease Mus81-Eme1 promotes conversion of interstrand DNA crosslinks into double-strands breaks
-
Hanada K, Budzowska M, Modesti M, Maas A, Wyman C, Essers J, Kanaar R (2006) The structure-specific endonuclease Mus81-Eme1 promotes conversion of interstrand DNA crosslinks into double-strands breaks. EMBO J 25: 4921–4932.
-
(2006)
EMBO J
, vol.25
, pp. 4921-4932
-
-
Hanada, K.1
Budzowska, M.2
Modesti, M.3
Maas, A.4
Wyman, C.5
Essers, J.6
Kanaar, R.7
-
29
-
-
33750025126
-
The role of AtMUS81 in DNA repair and its genetic interaction with the helicase AtRecQ4A
-
Hartung F, Suer S, Bergmann T, Puchta H (2006) The role of AtMUS81 in DNA repair and its genetic interaction with the helicase AtRecQ4A. Nucleic Acids Res 34: 4438–4448.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 4438-4448
-
-
Hartung, F.1
Suer, S.2
Bergmann, T.3
Puchta, H.4
-
30
-
-
58149144728
-
Topoisomerase 3alpha and RMI1 suppress somatic crossovers and are essential for resolution of meiotic recombination intermediates in Arabidopsis thaliana
-
Hartung F, Suer S, Knoll A, Wurz-Wildersinn R, Puchta H (2008) Topoisomerase 3alpha and RMI1 suppress somatic crossovers and are essential for resolution of meiotic recombination intermediates in Arabidopsis thaliana. PLoS Genet 4: e1000285.
-
(2008)
PLoS Genet
, vol.4
, pp. e1000285
-
-
Hartung, F.1
Suer, S.2
Knoll, A.3
Wurz-Wildersinn, R.4
Puchta, H.5
-
31
-
-
36749085205
-
Two closely related RecQ helicases have antagonistic roles in homologous recombination and DNA repair in Arabidopsis thaliana
-
Hartung F, Suer S, Puchta H (2007a) Two closely related RecQ helicases have antagonistic roles in homologous recombination and DNA repair in Arabidopsis thaliana. Proc Natl Acad Sci USA 104: 18836–18841.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 18836-18841
-
-
Hartung, F.1
Suer, S.2
Puchta, H.3
-
32
-
-
37249010135
-
The catalytically active tyrosine residues of both SPO11-1 and SPO11-2 are required for meiotic double-strand break induction in Arabidopsis
-
Hartung F, Wurz-Wildersinn R, Fuchs J, Schubert I, Suer S, Puchta H (2007b) The catalytically active tyrosine residues of both SPO11-1 and SPO11-2 are required for meiotic double-strand break induction in Arabidopsis. Plant Cell 19: 3090–3099.
-
(2007)
Plant Cell
, vol.19
, pp. 3090-3099
-
-
Hartung, F.1
Wurz-Wildersinn, R.2
Fuchs, J.3
Schubert, I.4
Suer, S.5
Puchta, H.6
-
33
-
-
40949119007
-
Expression and functional analysis of AtMUS81 in Arabidopsis meiosis reveals a role in the second pathway of crossing-over
-
Higgins JD, Buckling EF, Franklin FC, Jones GH (2008) Expression and functional analysis of AtMUS81 in Arabidopsis meiosis reveals a role in the second pathway of crossing-over. Plant J 54: 152–162.
-
(2008)
Plant J
, vol.54
, pp. 152-162
-
-
Higgins, J.D.1
Buckling, E.F.2
Franklin, F.C.3
Jones, G.H.4
-
34
-
-
78650242581
-
Mus81 and Yen1 promote reciprocal exchange during mitotic recombination to maintain genome integrity in budding yeast
-
Ho CK, Mazón G, Lam AF, Symington LS (2010) Mus81 and Yen1 promote reciprocal exchange during mitotic recombination to maintain genome integrity in budding yeast. Mol Cell 40: 988–1000.
-
(2010)
Mol Cell
, vol.40
, pp. 988-1000
-
-
Ho, C.K.1
Mazón, G.2
Lam, A.F.3
Symington, L.S.4
-
35
-
-
84959678845
-
A mechanism for gene conversion in fungi
-
Holliday R (1964) A mechanism for gene conversion in fungi. Genet Res 5: 282–304.
-
(1964)
Genet Res
, vol.5
, pp. 282-304
-
-
Holliday, R.1
-
36
-
-
56749119855
-
Identification of Holliday junction resolvases from humans and yeast
-
Ip SC, Rass U, Blanco MG, Flynn HR, Skehel JM, West SC (2008) Identification of Holliday junction resolvases from humans and yeast. Nature 456: 357–361.
-
(2008)
Nature
, vol.456
, pp. 357-361
-
-
Ip, S.C.1
Rass, U.2
Blanco, M.G.3
Flynn, H.R.4
Skehel, J.M.5
West, S.C.6
-
37
-
-
0345447604
-
Srs2 and Sgs1-Top3 suppress crossovers during double-strand break repair in yeast
-
Ira G, Malkova A, Liberi G, Foiani M, Haber JE (2003) Srs2 and Sgs1-Top3 suppress crossovers during double-strand break repair in yeast. Cell 115: 401–411.
-
(2003)
Cell
, vol.115
, pp. 401-411
-
-
Ira, G.1
Malkova, A.2
Liberi, G.3
Foiani, M.4
Haber, J.E.5
-
38
-
-
0026064725
-
Escherichia coli RuvC protein is an endonuclease that resolves the Holliday structure
-
Iwasaki H, Takahagi M, Shiba T, Nakata A, Shinagawa H (1991) Escherichia coli RuvC protein is an endonuclease that resolves the Holliday structure. EMBO J 10: 4381–4389.
-
(1991)
EMBO J
, vol.10
, pp. 4381-4389
-
-
Iwasaki, H.1
Takahagi, M.2
Shiba, T.3
Nakata, A.4
Shinagawa, H.5
-
39
-
-
70350504453
-
The DNA-damage response in human biology and disease
-
Jackson SP, Bartek J (2009) The DNA-damage response in human biology and disease. Nature 461: 1071–1078.
-
(2009)
Nature
, vol.461
, pp. 1071-1078
-
-
Jackson, S.P.1
Bartek, J.2
-
40
-
-
79952339847
-
The role of DNA helicases and their interaction partners in genome stability and meiotic recombination in plants
-
Knoll A, Puchta H (2011) The role of DNA helicases and their interaction partners in genome stability and meiotic recombination in plants. J Exp Bot 62: 1565–1579.
-
(2011)
J Exp Bot
, vol.62
, pp. 1565-1579
-
-
Knoll, A.1
Puchta, H.2
-
41
-
-
84901061167
-
The RTR complex as caretaker of genome stability and its unique meiotic function in plants
-
Knoll A, Schröpfer S, Puchta H (2014) The RTR complex as caretaker of genome stability and its unique meiotic function in plants. Front Plant Sci 5: 33.
-
(2014)
Front Plant Sci
, vol.5
, pp. 33
-
-
Knoll, A.1
Schröpfer, S.2
Puchta, H.3
-
42
-
-
0032848682
-
Type II restriction endonucleases: Structural, functional and evolutionary relationships
-
Kovall RA, Matthews BW (1999) Type II restriction endonucleases: structural, functional and evolutionary relationships. Curr Opin Chem Biol 3: 578–583.
-
(1999)
Curr Opin Chem Biol
, vol.3
, pp. 578-583
-
-
Kovall, R.A.1
Matthews, B.W.2
-
43
-
-
48249130774
-
At-TAX: A whole genome tiling array resource for developmental expression analysis and transcript identification in Arabidopsis thaliana
-
Laubinger S, Zeller G, Henz SR, Sachsenberg T, Widmer CK, Naouar N, Vuylsteke M, Schölkopf B, Rätsch G, Weigel D (2008) At-TAX: a whole genome tiling array resource for developmental expression analysis and transcript identification in Arabidopsis thaliana. Genome Biol 9: R112.
-
(2008)
Genome Biol
, vol.9
, pp. R112
-
-
Laubinger, S.1
Zeller, G.2
Henz, S.R.3
Sachsenberg, T.4
Widmer, C.K.5
Naouar, N.6
Vuylsteke, M.7
Schölkopf, B.8
Rätsch, G.9
Weigel, D.10
-
44
-
-
3242682246
-
The Arabidopsis AtRAD51 gene is dispensable for vegetative development but required for meiosis
-
Li W, Chen C, Markmann-Mulisch U, Timofejeva L, Schmelzer E, Ma H, Reiss B (2004) The Arabidopsis AtRAD51 gene is dispensable for vegetative development but required for meiosis. Proc Natl Acad Sci USA 101: 10596–10601.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 10596-10601
-
-
Li, W.1
Chen, C.2
Markmann-Mulisch, U.3
Timofejeva, L.4
Schmelzer, E.5
Ma, H.6
Reiss, B.7
-
45
-
-
38049173021
-
Homologous recombination in DNA repair and DNA damage tolerance
-
Li X, Heyer WD (2008) Homologous recombination in DNA repair and DNA damage tolerance. Cell Res 18: 99–113.
-
(2008)
Cell Res
, vol.18
, pp. 99-113
-
-
Li, X.1
Heyer, W.D.2
-
46
-
-
0033636685
-
Structures of helical junctions in nucleic acids
-
Lilley DMJ (2000) Structures of helical junctions in nucleic acids. Q Rev Biophys 33: 109–159.
-
(2000)
Q Rev Biophys
, vol.33
, pp. 109-159
-
-
Lilley, D.M.J.1
-
47
-
-
0020652956
-
Dynamics of cruciform extrusion in supercoiled DNA: Use of a synthetic inverted repeat to study conformational populations
-
Lilley DMJ, Markham AF (1983) Dynamics of cruciform extrusion in supercoiled DNA: use of a synthetic inverted repeat to study conformational populations. EMBO J 2: 527–533.
-
(1983)
EMBO J
, vol.2
, pp. 527-533
-
-
Lilley, D.M.J.1
Markham, A.F.2
-
48
-
-
36249015877
-
The RecQ helicase-topoisomerase IIIRmi1 complex: A DNA structure-specific ‘dissolvasome’?
-
Mankouri HW, Hickson ID (2007) The RecQ helicase-topoisomerase IIIRmi1 complex: a DNA structure-specific ‘dissolvasome’? Trends Biochem Sci 32: 538–546.
-
(2007)
Trends Biochem Sci
, vol.32
, pp. 538-546
-
-
Mankouri, H.W.1
Hickson, I.D.2
-
49
-
-
78649518584
-
RAD5A, RECQ4A, and MUS81 have specific functions in homologous recombination and define different pathways of DNA repair in Arabidopsis thaliana
-
Mannuss A, Dukowic-Schulze S, Suer S, Hartung F, Pacher M, Puchta H (2010) RAD5A, RECQ4A, and MUS81 have specific functions in homologous recombination and define different pathways of DNA repair in Arabidopsis thaliana. Plant Cell 22: 3318–3330.
-
(2010)
Plant Cell
, vol.22
, pp. 3318-3330
-
-
Mannuss, A.1
Dukowic-Schulze, S.2
Suer, S.3
Hartung, F.4
Pacher, M.5
Puchta, H.6
-
50
-
-
80053544629
-
Regulatory control of the resolution of DNA recombination intermediates during meiosis and mitosis
-
Matos J, Blanco MG, Maslen S, Skehel JM, West SC (2011) Regulatory control of the resolution of DNA recombination intermediates during meiosis and mitosis. Cell 147: 158–172.
-
(2011)
Cell
, vol.147
, pp. 158-172
-
-
Matos, J.1
Blanco, M.G.2
Maslen, S.3
Skehel, J.M.4
West, S.C.5
-
51
-
-
20444392767
-
RNAi-mediated silencing of OsGEN-L (OsGENlike), a new member of the RAD2/XPG nuclease family, causes male sterility by defect of microspore development in rice
-
Moritoh S, Miki D, Akiyama M, Kawahara M, Izawa T, Maki H, Shimamoto K (2005) RNAi-mediated silencing of OsGEN-L (OsGENlike), a new member of the RAD2/XPG nuclease family, causes male sterility by defect of microspore development in rice. Plant Cell Physiol 46: 699–715.
-
(2005)
Plant Cell Physiol
, vol.46
, pp. 699-715
-
-
Moritoh, S.1
Miki, D.2
Akiyama, M.3
Kawahara, M.4
Izawa, T.5
Maki, H.6
Shimamoto, K.7
-
52
-
-
0035148955
-
Requirement for three novel protein complexes in the absence of the Sgs1. DNA helicase in Saccharomyces cerevisiae
-
Mullen JR, Kaliraman V, Ibrahim SS, Brill SJ (2001) Requirement for three novel protein complexes in the absence of the Sgs1. DNA helicase in Saccharomyces cerevisiae. Genetics 157: 103–118.
-
(2001)
Genetics
, vol.157
, pp. 103-118
-
-
Mullen, J.R.1
Kaliraman, V.2
Ibrahim, S.S.3
Brill, S.J.4
-
53
-
-
18944395928
-
Yeast Rmi1/ Nce4 controls genome stability as a subunit of the Sgs1-Top3 complex
-
Mullen JR, Nallaseth FS, Lan YQ, Slagle CE, Brill SJ (2005) Yeast Rmi1/ Nce4 controls genome stability as a subunit of the Sgs1-Top3 complex. Mol Cell Biol 25: 4476–4487.
-
(2005)
Mol Cell Biol
, vol.25
, pp. 4476-4487
-
-
Mullen, J.R.1
Nallaseth, F.S.2
Lan, Y.Q.3
Slagle, C.E.4
Brill, S.J.5
-
54
-
-
67649641641
-
Coordination of structure-specific nucleases by human SLX4/BTBD12 is required for DNA repair
-
Muñoz IM, Hain K, Déclais AC, Gardiner M, Toh GW, Sanchez-Pulido L, Heuckmann JM, Toth R, Macartney T, Eppink B, et al (2009) Coordination of structure-specific nucleases by human SLX4/BTBD12 is required for DNA repair. Mol Cell 35: 116–127.
-
(2009)
Mol Cell
, vol.35
, pp. 116-127
-
-
Muñoz, I.M.1
Hain, K.2
Déclais, A.C.3
Gardiner, M.4
Toh, G.W.5
Sanchez-Pulido, L.6
Heuckmann, J.M.7
Toth, R.8
Macartney, T.9
Eppink, B.10
-
55
-
-
84861406975
-
Distinct roles of Mus81, Yen1, Slx1- Slx4, and Rad1 nucleases in the repair of replication-born double-strand breaks by sister chromatid exchange
-
Muñoz-Galván S, Tous C, Blanco MG, Schwartz EK, Ehmsen KT, West SC, Heyer WD, Aguilera A (2012) Distinct roles of Mus81, Yen1, Slx1- Slx4, and Rad1 nucleases in the repair of replication-born double-strand breaks by sister chromatid exchange. Mol Cell Biol 32: 1592–1603.
-
(2012)
Mol Cell Biol
, vol.32
, pp. 1592-1603
-
-
Muñoz-galván, S.1
Tous, C.2
Blanco, M.G.3
Schwartz, E.K.4
Ehmsen, K.T.5
West, S.C.6
Heyer, W.D.7
Aguilera, A.8
-
56
-
-
0023931883
-
Improved staining of proteins in polyacrylamide gels including isoelectric focusing gels with clear background at nanogram sensitivity using Coomassie Brilliant Blue G-250 and R-250
-
Neuhoff V, Arold N, Taube D, Ehrhardt W (1988) Improved staining of proteins in polyacrylamide gels including isoelectric focusing gels with clear background at nanogram sensitivity using Coomassie Brilliant Blue G-250 and R-250. Electrophoresis 9: 255–262.
-
(1988)
Electrophoresis
, vol.9
, pp. 255-262
-
-
Neuhoff, V.1
Arold, N.2
Taube, D.3
Ehrhardt, W.4
-
57
-
-
0141707817
-
Generating crossovers by resolution of nicked Holliday junctions: A role for Mus81-Eme1 in meiosis
-
Osman F, Dixon J, Doe CL, Whitby MC (2003) Generating crossovers by resolution of nicked Holliday junctions: a role for Mus81-Eme1 in meiosis. Mol Cell 12: 761–774.
-
(2003)
Mol Cell
, vol.12
, pp. 761-774
-
-
Osman, F.1
Dixon, J.2
Doe, C.L.3
Whitby, M.C.4
-
58
-
-
65449190133
-
Efficient second strand cleavage during Holliday junction resolution by RuvC requires both increased junction flexibility and an exposed 59 phosphate
-
Osman F, Gaskell L, Whitby MC (2009) Efficient second strand cleavage during Holliday junction resolution by RuvC requires both increased junction flexibility and an exposed 59 phosphate. PLoS ONE 4: e5347.
-
(2009)
PLoS ONE
, vol.4
, pp. e5347
-
-
Osman, F.1
Gaskell, L.2
Whitby, M.C.3
-
59
-
-
0015954847
-
Isolation and characterization of an Escherichia coli ruv mutant which forms nonseptate filaments after low doses of ultraviolet light irradiation
-
Otsuji N, Iyehara H, Hideshima Y (1974) Isolation and characterization of an Escherichia coli ruv mutant which forms nonseptate filaments after low doses of ultraviolet light irradiation. J Bacteriol 117: 337–344.
-
(1974)
J Bacteriol
, vol.117
, pp. 337-344
-
-
Otsuji, N.1
Iyehara, H.2
Hideshima, Y.3
-
60
-
-
0028343925
-
The kinetics of spontaneous DNA branch migration
-
Panyutin IG, Hsieh P (1994) The kinetics of spontaneous DNA branch migration. Proc Natl Acad Sci USA 91: 2021–2025.
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 2021-2025
-
-
Panyutin, I.G.1
Hsieh, P.2
-
61
-
-
0025267106
-
Cleavage specificity of bacteriophage T4 endonuclease VII and bacteriophage T7 endonuclease I on synthetic branch migratable Holliday junctions
-
Picksley SM, Parsons CA, Kemper B, West SC (1990) Cleavage specificity of bacteriophage T4 endonuclease VII and bacteriophage T7 endonuclease I on synthetic branch migratable Holliday junctions. J Mol Biol 212: 723–735.
-
(1990)
J Mol Biol
, vol.212
, pp. 723-735
-
-
Picksley, S.M.1
Parsons, C.A.2
Kemper, B.3
West, S.C.4
-
62
-
-
0028304612
-
Structure of four-way DNA junctions containing a nick in one strand
-
Pöhler JR, Duckett DR, Lilley DMJ (1994) Structure of four-way DNA junctions containing a nick in one strand. J Mol Biol 238: 62–74.
-
(1994)
J Mol Biol
, vol.238
, pp. 62-74
-
-
Pöhler, J.R.1
Duckett, D.R.2
Lilley, D.M.J.3
-
63
-
-
77954838714
-
Mechanism of Holliday junction resolution by the human GEN1 protein
-
Rass U, Compton SA, Matos J, Singleton MR, Ip SC, Blanco MG, Griffith JD, West SC (2010) Mechanism of Holliday junction resolution by the human GEN1 protein. Genes Dev 24: 1559–1569.
-
(2010)
Genes Dev
, vol.24
, pp. 1559-1569
-
-
Rass, U.1
Compton, S.A.2
Matos, J.3
Singleton, M.R.4
Ip, S.C.5
Blanco, M.G.6
Griffith, J.D.7
West, S.C.8
-
64
-
-
84896724870
-
Defining the roles of the N-terminal region and the helicase activity of RECQ4A in DNA repair and homologous recombination in Arabidopsis
-
Schröpfer S, Kobbe D, Hartung F, Knoll A, Puchta H (2014) Defining the roles of the N-terminal region and the helicase activity of RECQ4A in DNA repair and homologous recombination in Arabidopsis. Nucleic Acids Res 42: 1684–1697.
-
(2014)
Nucleic Acids Res
, vol.42
, pp. 1684-1697
-
-
Schröpfer, S.1
Kobbe, D.2
Hartung, F.3
Knoll, A.4
Puchta, H.5
-
65
-
-
0028972024
-
Identification of double Holliday junctions as intermediates in meiotic recombination
-
Schwacha A, Kleckner N (1995) Identification of double Holliday junctions as intermediates in meiotic recombination. Cell 83: 783–791.
-
(1995)
Cell
, vol.83
, pp. 783-791
-
-
Schwacha, A.1
Kleckner, N.2
-
66
-
-
79955522790
-
Processing of joint molecule intermediates by structure-selective endonucleases during homologous recombination in eukaryotes
-
Schwartz EK, Heyer WD (2011) Processing of joint molecule intermediates by structure-selective endonucleases during homologous recombination in eukaryotes. Chromosoma 120: 109–127.
-
(2011)
Chromosoma
, vol.120
, pp. 109-127
-
-
Schwartz, E.K.1
Heyer, W.D.2
-
67
-
-
0028043346
-
Genetic recombination in E.coli: RuvC protein cleaves Holliday junctions at resolution hotspots in vitro
-
Shah R, Bennett RJ, West SC (1994) Genetic recombination in E. coli: RuvC protein cleaves Holliday junctions at resolution hotspots in vitro. Cell 79: 853–864.
-
(1994)
Cell
, vol.79
, pp. 853-864
-
-
Shah, R.1
Bennett, R.J.2
West, S.C.3
-
68
-
-
0025332556
-
Molecular and functional analysis of the ruv region of Escherichia coli K-12 reveals three genes involved in DNA repair and recombination
-
Sharples GJ, Benson FE, Illing GT, Lloyd RG (1990) Molecular and functional analysis of the ruv region of Escherichia coli K-12 reveals three genes involved in DNA repair and recombination. Mol Gen Genet 221: 219–226.
-
(1990)
Mol Gen Genet
, vol.221
, pp. 219-226
-
-
Sharples, G.J.1
Benson, F.E.2
Illing, G.T.3
Lloyd, R.G.4
-
69
-
-
0032873606
-
Holliday junction processing in bacteria: Insights from the evolutionary conservation of RuvABC, RecG, and RusA
-
Sharples GJ, Ingleston SM, Lloyd RG (1999) Holliday junction processing in bacteria: insights from the evolutionary conservation of RuvABC, RecG, and RusA. J Bacteriol 181: 5543–5550.
-
(1999)
J Bacteriol
, vol.181
, pp. 5543-5550
-
-
Sharples, G.J.1
Ingleston, S.M.2
Lloyd, R.G.3
-
70
-
-
0029908324
-
Analysis of substrate specificity of the RuvC holliday junction resolvase with synthetic Holliday junctions
-
Shida T, Iwasaki H, Saito A, Kyogoku Y, Shinagawa H (1996) Analysis of substrate specificity of the RuvC holliday junction resolvase with synthetic Holliday junctions. J Biol Chem 271: 26105–26109.
-
(1996)
J Biol Chem
, vol.271
, pp. 26105-26109
-
-
Shida, T.1
Iwasaki, H.2
Saito, A.3
Kyogoku, Y.4
Shinagawa, H.5
-
71
-
-
77949420670
-
GEN1/Yen1 and the SLX4 complex: Solutions to the problem of Holliday junction resolution
-
Svendsen JM, Harper JW (2010) GEN1/Yen1 and the SLX4 complex: solutions to the problem of Holliday junction resolution. Genes Dev 24: 521–536.
-
(2010)
Genes Dev
, vol.24
, pp. 521-536
-
-
Svendsen, J.M.1
Harper, J.W.2
-
72
-
-
67649662604
-
Mammalian BTBD12/SLX4 assembles a Holliday junction resolvase and is required for DNA repair
-
Svendsen JM, Smogorzewska A, Sowa ME, O’Connell BC, Gygi SP, Elledge SJ, Harper JW (2009) Mammalian BTBD12/SLX4 assembles a Holliday junction resolvase and is required for DNA repair. Cell 138: 63–77.
-
(2009)
Cell
, vol.138
, pp. 63-77
-
-
Svendsen, J.M.1
Smogorzewska, A.2
Sowa, M.E.3
O’connell, B.C.4
Gygi, S.P.5
Elledge, S.J.6
Harper, J.W.7
-
74
-
-
84890330527
-
MEGA6: Molecular Evolutionary Genetics Analysis version 6.0
-
Tamura K, Stecher G, Peterson D, Filipski A, Kumar S (2013) MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Mol Biol Evol 30: 2725–2729.
-
(2013)
Mol Biol Evol
, vol.30
, pp. 2725-2729
-
-
Tamura, K.1
Stecher, G.2
Peterson, D.3
Filipski, A.4
Kumar, S.5
-
75
-
-
77951246052
-
Overlapping roles for Yen1 and Mus81 in cellular Holliday junction processing
-
Tay YD, Wu L (2010) Overlapping roles for Yen1 and Mus81 in cellular Holliday junction processing. J Biol Chem 285: 11427–11432.
-
(2010)
J Biol Chem
, vol.285
, pp. 11427-11432
-
-
Tay, Y.D.1
Wu, L.2
-
76
-
-
79953894934
-
Human flap endonuclease structures, DNA double-base flipping, and a unified understanding of the FEN1 superfamily
-
Tsutakawa SE, Classen S, Chapados BR, Arvai AS, Finger LD, Guenther G, Tomlinson CG, Thompson P, Sarker AH, Shen B, et al (2011) Human flap endonuclease structures, DNA double-base flipping, and a unified understanding of the FEN1 superfamily. Cell 145: 198–211.
-
(2011)
Cell
, vol.145
, pp. 198-211
-
-
Tsutakawa, S.E.1
Classen, S.2
Chapados, B.R.3
Arvai, A.S.4
Finger, L.D.5
Guenther, G.6
Tomlinson, C.G.7
Thompson, P.8
Sarker, A.H.9
Shen, B.10
-
77
-
-
84860722082
-
Double strand binding-single strand incision mechanism for human flap endonuclease: Implications for the superfamily
-
Tsutakawa SE, Tainer JA (2012) Double strand binding-single strand incision mechanism for human flap endonuclease: implications for the superfamily. Mech Ageing Dev 133: 195–202.
-
(2012)
Mech Ageing Dev
, vol.133
, pp. 195-202
-
-
Tsutakawa, S.E.1
Tainer, J.A.2
-
78
-
-
0034822411
-
Molecular mechanisms of DNA damage and repair: Progress in plants
-
Tuteja N, Singh MB, Misra MK, Bhalla PL, Tuteja R (2001) Molecular mechanisms of DNA damage and repair: progress in plants. Crit Rev Biochem Mol Biol 36: 337–397.
-
(2001)
Crit Rev Biochem Mol Biol
, vol.36
, pp. 337-397
-
-
Tuteja, N.1
Singh, M.B.2
Misra, M.K.3
Bhalla, P.L.4
Tuteja, R.5
-
79
-
-
67749116521
-
The search for a human Holliday junction resolvase
-
West SC (2009) The search for a human Holliday junction resolvase. Biochem Soc Trans 37: 519–526.
-
(2009)
Biochem Soc Trans
, vol.37
, pp. 519-526
-
-
West, S.C.1
-
80
-
-
0347987856
-
The Bloom’s syndrome helicase suppresses crossing over during homologous recombination
-
Wu L, Hickson ID (2003) The Bloom’s syndrome helicase suppresses crossing over during homologous recombination. Nature 426: 870–874.
-
(2003)
Nature
, vol.426
, pp. 870-874
-
-
Wu, L.1
Hickson, I.D.2
-
81
-
-
84886241606
-
Coordinated actions of SLX1-SLX4 and MUS81-EME1 for Holliday junction resolution in human cells
-
Wyatt HD, Sarbajna S, Matos J, West SC (2013) Coordinated actions of SLX1-SLX4 and MUS81-EME1 for Holliday junction resolution in human cells. Mol Cell 52: 234–247.
-
(2013)
Mol Cell
, vol.52
, pp. 234-247
-
-
Wyatt, H.D.1
Sarbajna, S.2
Matos, J.3
West, S.C.4
-
82
-
-
77954382263
-
Human topoisomerase IIIalpha is a single-stranded DNA decatenase that is stimulated by BLM and RMI1
-
Yang J, Bachrati CZ, Ou J, Hickson ID, Brown GW (2010) Human topoisomerase IIIalpha is a single-stranded DNA decatenase that is stimulated by BLM and RMI1. J Biol Chem 285: 21426–21436.
-
(2010)
J Biol Chem
, vol.285
, pp. 21426-21436
-
-
Yang, J.1
Bachrati, C.Z.2
Ou, J.3
Hickson, I.D.4
Brown, G.W.5
-
83
-
-
84863286568
-
The OsGEN-L protein from Oryza sativa possesses Holliday junction resolvase activity as well as 59-flap endonuclease activity
-
Yang Y, Ishino S, Yamagami T, Kumamaru T, Satoh H, Ishino Y (2012) The OsGEN-L protein from Oryza sativa possesses Holliday junction resolvase activity as well as 59-flap endonuclease activity. J Biochem 151: 317–327.
-
(2012)
J Biochem
, vol.151
, pp. 317-327
-
-
Yang, Y.1
Ishino, S.2
Yamagami, T.3
Kumamaru, T.4
Satoh, H.5
Ishino, Y.6
-
84
-
-
84859714621
-
Delineation of joint molecule resolution pathways in meiosis identifies a crossover-specific resolvase
-
Zakharyevich K, Tang S, Ma Y, Hunter N (2012) Delineation of joint molecule resolution pathways in meiosis identifies a crossover-specific resolvase. Cell 149: 334–347
-
(2012)
Cell
, vol.149
, pp. 334-347
-
-
Zakharyevich, K.1
Tang, S.2
Ma, Y.3
Hunter, N.4
|