Exploring extraction/dissolution procedures for analysis of starch chain-length distributions

Carbohydrate Polymers

Volumn 114, Issue , 2014, Pages 36-42

  Wu, Alex Chi ^a,b   Li, Enpeng ^a   Gilbert, Robert G ^a,b  

^a HUAZHONG UNIVERSITY OF SCIENCE AND TECHNOLOGY   (China)

^b UNIVERSITY OF QUEENSLAND   (Australia)

Author keywords

Amylose; Chain length distribution; Dimethyl sulfoxide; Fluorophore assisted carbohydrate electrophoresis (FACE); Size exclusion chromatography (SEC); Starch

Indexed keywords

AMYLOPECTINS; CARBOHYDRATES; CYCLODEXTRINS; DIMETHYL SULFOXIDE; DISSOLUTION; ELECTROPHORESIS; FLUOROPHORES; ORGANIC SOLVENTS; POLYMERIZATION; SIZE EXCLUSION CHROMATOGRAPHY; STARCH;

AMYLOSE; CHAIN LENGTH DISTRIBUTION; DEGREE OF POLYMERIZATION; DEGREES OF POLYMERIZATIONS; DILUTE CONCENTRATIONS; DIMETHYL SULFOXIDE (DMSO); FLUOROPHORE-ASSISTED CARBOHYDRATE ELECTROPHORESIS; NUMBER DISTRIBUTION;

CHAINS; DIMETHYL SULFOXIDE;

GLUCAN; STARCH;

CHEMISTRY; PROCEDURES; SIZE EXCLUSION CHROMATOGRAPHY; SOLUBILITY;

CHROMATOGRAPHY, GEL; GLUCANS; SOLUBILITY; STARCH;

EID: 84906727842     PISSN: 01448617     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.carbpol.2014.08.001     Document Type: Article

References (44)

1. S.G. Ball, and M.K. Morell From bacterial glycogen to starch: Understanding the biogenesis of the plant starch granule Annual Review of Plant Biology 54 2003 207 233
2. I.L. Batey, and B.M. Curtin Measurement of amylose/amylopectin ratio by high-performance liquid chromatography Starch-Starke 48 9 1996 338 344
3. V.M. Butardo, M.A. Fitzgerald, A.R. Bird, M.J. Gidley, B.M. Flanagan, and O. Larroque et al. Impact of down-regulation of starch branching enzyme IIb in rice by artificial microRNA- and hairpin RNA-mediated RNA silencing Journal of Experimental Botany 62 14 2011 4927 4941
4. J.V. Castro, C. Dumas, H. Chiou, M.A. Fitzgerald, and R.G. Gilbert Mechanistic information from analysis of molecular weight distributions of starch Biomacromolecules 6 4 2005 2248 2259
5. R.A. Cave, S.A. Seabrook, M.J. Gidley, and R.G. Gilbert Characterization of starch by size-exclusion chromatography: The limitations imposed by shear scission Biomacromolecules 10 8 2009 2245 2253
6. H. Chiou, M. Martin, and M. Fitzgerald Effect of purification methods on rice starch structure Starch-Starke 54 9 2002 415 420
7. Chu, S.; Hasjim, J.; Hickey, L. T.; Fox, G.; & Gilbert, R. G. (2014). Structural changes of starch molecules in barley grain during germination. Cereal Chemistry, 91, in press, http://dx.doi.org/10.1094/CCHEM-1009-1013-0174- R.
8. J. Ciric, A.J.J. Woortman, and K. Loos Analysis of isoamylase debranched starches with size exclusion chromatography utilizing PFG columns Carbohydrate Polymers 112 1 2014 458 461
9. R.P. Cuevas, V.D. Daygon, H.M. Corpuz, L. Nora, R.F. Reinke, and D.L.E. Waters et al. Melting the secrets of gelatinisation temperature in rice Functional Plant Biology 37 5 2010 439 447
10. D. Delvalle, S. Dumez, F. Wattebled, I. Roldan, V. Planchot, and P. Berbezy et al. Soluble starch synthase I: A major determinant for the synthesis of amylopectin in Arabidopsis thaliana leaves Plant Journal 43 3 2005 398 412
11. M.A. Fitzgerald, C.J. Bergman, A.P. Resurreccion, J. Moller, R. Jimenez, and R.F. Reinke et al. Addressing the dilemmas of measuring amylose in rice Cereal Chemistry 86 5 2009 492 498
12. T. Fontaine, C. Dhulst, M.L. Maddelein, F. Routier, T.M. Pepin, and A. Decq et al. Toward an understanding of the biogenesis of the starch granule - Evidence that chlamydomonas soluble starch synthase-ii controls the synthesis of intermediate size glucans of amylopectin Journal of Biological Chemistry 268 22 1993 16223 16230
13. M. Gaborieau, R.G. Gilbert, A. Gray-Weale, J.M. Hernandez, and P. Castignolles Theory of multiple-detection size-exclusion chromatography of complex branched polymers Macromolecular Theory and Simulations 16 1 2007 13 28
14. R.G. Gilbert Size-separation characterization of starch and glycogen for biosynthesis-structure-property relationships Analytical and Bioanalytical Chemistry 399 4 2011 1425 1438
15. J.A. Han, and S.T. Lim Structural changes in corn starches during alkaline dissolution by vortexing Carbohydrate Polymers 55 2 2004 193 199
16. J.A. Han, and S.T. Lim Structural changes of corn starches by heating and stirring in DMSO measured by SEC-MALLS-RI system Carbohydrate Polymers 55 3 2004 265 272
17. S. Hizukuri, Y. Takeda, M. Yasuda, and A. Suzuki Multi-branched nature of amylose and the action of debranching enzymes Carbohydrate Research 94 2 1981 205 213
18. J.H. Lee, J.A. Han, and S.T. Lim Effect of pH on aqueous structure of maize starches analyzed by HPSEC-MALLS-RI system Food Hydrocolloids 23 7 2009 1935 1939
19. L. Li, M. Blanco, and J.-l. Jane Physicochemical properties of endosperm and pericarp starches during maize development Carbohydrate Polymers 67 4 2007 630 639
20. E. Li, J. Hasjim, V. Singh, M. Tizzotti, I.D. Godwin, and R.G. Gilbert Insights into the events controlling starch biosynthesis in sorghum from structural changes induced by different growth temperatures Cereal Chemistry 90 3 2013 223 230
21. A.J. Lisle, M. Martin, and M.A. Fitzgerald Chalky and translucent rice grains differ in starch composition and structure and cooking properties Cereal Chemistry 77 5 2000 627 632
22. M.K. Morell, B. Kosar-Hashemi, M. Cmiel, M.S. Samuel, P. Chandler, and S. Rahman et al. Barley sex6 mutants lack starch synthase IIa activity and contain a starch with novel properties Plant Journal 34 2 2003 172 184
23. M.K. Morell, and A.M. Myers Towards the rational design of cereal starches Current Opinion in Plant Biology 8 2 2005 204 210
24. T. Nagamine, and K. Komae Improvement of a method for chain-length distribution analysis of wheat amylopectin Journal of Chromatography A 732 2 1996 255 259
25. Y. Nakamura, A. Sakurai, Y. Inaba, K. Kimura, N. Iwasawa, and T. Nagamine The fine structure of amylopectin in endosperm from Asian cultivated rice can be largely classified into two classes Starch-Starke 54 3-4 2002 117 131
26. M.G. O'Shea, and M.K. Morell High resolution slab gel electrophoresis of 8-amino-1,3,6-pyrenetrisulfonic acid (APTS) tagged oligosaccharides using a DNA sequencer Electrophoresis 17 4 1996 681 686
27. M.G. O'Shea, M.S. Samuel, C.M. Konik, and M.K. Morell Fluorophore-assisted carbohydrate electrophoresis (FACE) of oligosaccharides: Efficiency of labelling and high-resolution separation Carbohydrate Research 307 1-2 1998 1 12
28. A. Regina, J. Blazek, E. Gilbert, B.M. Flanagan, M.J. Gidley, and C. Cavanagh et al. Differential effects of genetically distinct mechanisms of elevating amylose on barley starch characteristics Carbohydrate Polymers 89 3 2012 979 991
29. A. Regina, B. Kosar-Hashemi, Z.Y. Li, L. Rampling, M. Cmiel, and M.C. Gianibelli et al. Multiple isoforms of starch branching enzyme-I in wheat: Lack of the major SBE-I isoform does not alter starch phenotype Functional Plant Biology 31 6 2004 591 601
30. A. Regina, B. Kosar-Hashemi, S. Ling, Z. Li, S. Rahman, and M. Morell Control of starch branching in barley defined through differential RNAi suppression of starch branching enzyme IIa and IIb Journal of Experimental Botany 61 5 2010 1469 1482
31. 1H NMR spectroscopy Macromolecular Bioscience 9 5 2009 506 514
32. A.H. Schulman, and K. Kammiovirta Purificatoin of barley starch by protein extraction Starch-Starke 43 10 1991 387 389
33. Y. Song, and J. Jane Characterization of barley starches of waxy, normal, and high amylose varieties Carbohydrate Polymers 41 4 2000 365 377
34. S. Streb, S. Eicke, and S.C. Zeeman The simultaneous abolition of three starch hydrolases blocks transient starch breakdown in arabidopsis Journal of Biological Chemistry 287 50 2012 41745 41756
35. Z.A. Syahariza, E. Li, and J. Hasjim Extraction and dissolution of starch from rice and sorghum grains for accurate structural analysis Carbohydrate Polymers 82 1 2010 14 20
36. Z.A. Syahariza, S. Sar, J. Hasjim, M.J. Tizzotti, and R.G. Gilbert The importance of amylose and amylopectin fine structures for starch digestibility in cooked rice grains Food Chemistry 136 2 2013 742 749
37. F. Vilaplana, J. Hasjim, and R.G. Gilbert Amylose content in starches: Toward optimal definition and validating experimental methods Carbohydrate Polymers 88 1 2012 103 111
38. Wang, K.; Hasjim, J.; Wu, A. C.; Henry, R. J.; & Gilbert, R. G. (2014). Variation in amylose fine structure of starches from different botanical sources. Journal of Agricultural and Food Chemistry, in press, http://dx.doi.org/10.1021/jf5011676.
39. R.M. Ward, Q. Gao, H. de Bruyn, R.G. Gilbert, and M.A. Fitzgerald Improved methods for the structural analysis of the amylose-rich fraction from rice flour Biomacromolecules 7 3 2006 866 876
40. K.S. Wong, A. Kubo, J.L. Jane, K. Harada, H. Satoh, and Y. Nakamura Structures and properties of arnylopectin and phytoglycogen in the endosperm of sugary-1 mutants of rice Journal of Cereal Science 37 2 2003 139 149
41. A.C. Wu, and R.G. Gilbert Molecular weight distributions of starch branches reveal genetic constraints on biosynthesis Biomacromolecules 11 12 2010 3539 3547
42. A.C. Wu, M.K. Morell, and R.G. Gilbert A parameterized model of amylopectin synthesis provides key insights into the synthesis of granular starch PLoS ONE 8 6 2013 e65768
43. A.C. Wu, J.-P. Ral, M.K. Morell, and R.G. Gilbert New perspectives on the role of alpha-and beta-amylases in transient starch synthesis PLoS ONE 9 6 2014 10
44. A.C. Wu, T. Witt, and R.G. Gilbert Characterization methods for starch-based materials: State of the art and perspectives Australian Journal of Chemistry 66 12 2013 1550 1563