메뉴 건너뛰기




Volumn 21, Issue 5, 2014, Pages 815-823

Influenza detection from emergency department reports using natural language processing and Bayesian network classifiers

Author keywords

[No Author keywords available]

Indexed keywords

ACCURACY; AREA UNDER THE CURVE; ARTICLE; BAYESIAN LEARNING; CONTROLLED STUDY; EMERGENCY WARD; EXTRACTION; HUMAN; INFLUENZA; MAJOR CLINICAL STUDY; NATURAL LANGUAGE PROCESSING; PHYSICIAN; PROBABILITY; RECALL; RECEIVER OPERATING CHARACTERISTIC; SHIGELLOSIS;

EID: 84906323779     PISSN: 10675027     EISSN: 1527974X     Source Type: Journal    
DOI: 10.1136/amiajnl-2013-001934     Document Type: Article
Times cited : (43)

References (32)
  • 1
    • 84906325203 scopus 로고    scopus 로고
    • Clinical feature extraction from emergency department reports for biosurveillance [master's thesis]. Pittsburgh, University of Pittsburgh
    • Chu D. Clinical feature extraction from emergency department reports for biosurveillance [master's thesis]. Pittsburgh, University of Pittsburgh, 2007.
    • (2007)
    • Chu, D.1
  • 2
    • 0028403632 scopus 로고
    • A general natural-language text processor for clinical radiology
    • Friedman C, Alderson PO, Austin JH, et al. A general natural-language text processor for clinical radiology. J Am Med Inform Assoc 1994;1:161-74.
    • (1994) J Am Med Inform Assoc , vol.1 , pp. 161-174
    • Friedman, C.1    Alderson, P.O.2    Austin, J.H.3
  • 3
    • 4544280638 scopus 로고    scopus 로고
    • Automated encoding of clinical documents based on natural language processing
    • Friedman C, Shagina L, Lussier Y, et al. Automated encoding of clinical documents based on natural language processing. J Am Med Inform Assoc 2004;11:392-402.
    • (2004) J Am Med Inform Assoc , vol.11 , pp. 392-402
    • Friedman, C.1    Shagina, L.2    Lussier, Y.3
  • 4
    • 79251581866 scopus 로고    scopus 로고
    • The eMERGE Network: a consortium of biorepositories linked to electronic medical records data for conducting genomic studies
    • McCarty CA, Chisholm RL, Chute CG, et al. The eMERGE Network: a consortium of biorepositories linked to electronic medical records data for conducting genomic studies. BMC Med Genomics 2011:4-13.
    • (2011) BMC Med Genomics , pp. 4-13
    • McCarty, C.A.1    Chisholm, R.L.2    Chute, C.G.3
  • 5
    • 84870749672 scopus 로고    scopus 로고
    • Analyzing the heterogeneity and complexity of electronic health record oriented phenotyping algorithms
    • Conway M, Berg RL, Carrell D, et al. Analyzing the heterogeneity and complexity of electronic health record oriented phenotyping algorithms. AMIA Annu Symp Proc 2011:274-83.
    • (2011) AMIA Annu Symp Proc , pp. 274-283
    • Conway, M.1    Berg, R.L.2    Carrell, D.3
  • 6
    • 84874205675 scopus 로고    scopus 로고
    • The SHARPn project on secondary use of electronic medical record data: progress, plans, and possibilities
    • Chute CG, Pathak J, Savova GK, et al. The SHARPn project on secondary use of electronic medical record data: progress, plans, and possibilities. AMIA Annu Symp Proc 2011;2011:248-56.
    • (2011) AMIA Annu Symp Proc , vol.2011 , pp. 248-256
    • Chute, C.G.1    Pathak, J.2    Savova, G.K.3
  • 7
    • 84863123646 scopus 로고    scopus 로고
    • Importance of multi-modal approaches to effectively identify cataract cases from electronic health records
    • Peissig PL, Rasmussen LV, Berg RL, et al. Importance of multi-modal approaches to effectively identify cataract cases from electronic health records. J Am Med Inform Assoc 2012;19:225-34.
    • (2012) J Am Med Inform Assoc , vol.19 , pp. 225-234
    • Peissig, P.L.1    Rasmussen, L.V.2    Berg, R.L.3
  • 8
    • 84880818788 scopus 로고    scopus 로고
    • Modeling and executing electronic health records driven phenotyping algorithms using the NQF quality data model and JBoss® drools engine
    • Li DC, Endle CM, Murthy S, et al. Modeling and executing electronic health records driven phenotyping algorithms using the NQF quality data model and JBoss® drools engine. AMIA Annu Symp Proc 2012;2012:532-41.
    • (2012) AMIA Annu Symp Proc , vol.2012 , pp. 532-541
    • Li, D.C.1    Endle, C.M.2    Murthy, S.3
  • 9
    • 84881328205 scopus 로고    scopus 로고
    • Validation of electronic medical record-based phenotyping algorithms: results and lessons learned from the eMERGE network
    • Newton KM, Peissig PL, Kho AN, et al. Validation of electronic medical record-based phenotyping algorithms: results and lessons learned from the eMERGE network. J Am Med Inform Assoc 2013;20:e147-54.
    • (2013) J Am Med Inform Assoc , vol.20
    • Newton, K.M.1    Peissig, P.L.2    Kho, A.N.3
  • 11
    • 0032248316 scopus 로고    scopus 로고
    • Diagnosing community-acquired pneumonia with a Bayesian network
    • Aronsky D, Haug PJ. Diagnosing community-acquired pneumonia with a Bayesian network. Proc AMIA Symp 1998:632-6.
    • (1998) Proc AMIA Symp , pp. 632-636
    • Aronsky, D.1    Haug, P.J.2
  • 12
    • 0042334852 scopus 로고    scopus 로고
    • Creating a text classifier to detect chest radiograph reports consistent with features of inhalational anthrax
    • Chapman W, Wagner M, Cooper G, et al. Creating a text classifier to detect chest radiograph reports consistent with features of inhalational anthrax. J Am Med Inform Assoc 2003;10:494-503.
    • (2003) J Am Med Inform Assoc , vol.10 , pp. 494-503
    • Chapman, W.1    Wagner, M.2    Cooper, G.3
  • 13
    • 77958597919 scopus 로고    scopus 로고
    • Leveraging informatics for genetic studies: use of the electronic medical record to enable a genome-wide association study of peripheral arterial disease
    • Kullo IJ, Fan J, Pathak J, et al. Leveraging informatics for genetic studies: use of the electronic medical record to enable a genome-wide association study of peripheral arterial disease. J Am Med Inform Assoc 2010;17:568-74.
    • (2010) J Am Med Inform Assoc , vol.17 , pp. 568-574
    • Kullo, I.J.1    Fan, J.2    Pathak, J.3
  • 14
    • 77955297110 scopus 로고    scopus 로고
    • Electronic medical records for discovery research in rheumatoid arthritis.
    • (Hoboken)
    • Liao KP, Cai T, Gainer V, et al. Electronic medical records for discovery research in rheumatoid arthritis. Arthritis Care Res (Hoboken) 2010;62:1120-7
    • (2010) Arthritis Care Res , vol.62 , pp. 1120-1127
    • Liao, K.P.1    Cai, T.2    Gainer, V.3
  • 15
    • 84855253927 scopus 로고    scopus 로고
    • Comparison of natural language processing biosurveillance methods for identifying influenza from encounter notes
    • Elkin PL, Froehling DA, Wahner-Roedler DL, et al. Comparison of natural language processing biosurveillance methods for identifying influenza from encounter notes. Ann Intern Med 2012;156:11-18.
    • (2012) Ann Intern Med , vol.156 , pp. 11-18
    • Elkin, P.L.1    Froehling, D.A.2    Wahner-Roedler, D.L.3
  • 16
    • 84906325194 scopus 로고    scopus 로고
    • RODS_Laboratory. Demonstration of Influenza Monitoring System.
    • RODS_Laboratory. Demonstration of Influenza Monitoring System. 2013. http://www.youtube.com/watch?v=qOlGbrTsS-A&hd=1
    • (2013)
  • 17
    • 84906315418 scopus 로고    scopus 로고
    • Probabilistic, decision-theoretic disease surveillance and control.
    • Wagner MM, Tsui FC, Cooper GF, et al. Probabilistic, decision-theoretic disease surveillance and control. Online J Public Health 2011;3.
    • (2011) Online J Public Health , pp. 3
    • Wagner, M.M.1    Tsui, F.C.2    Cooper, G.F.3
  • 18
    • 84869027608 scopus 로고    scopus 로고
    • Probabilistic case detection for disease surveillance using data in electronic medical records.
    • Tsui FC, Wagner MM, Cooper GF, et al. Probabilistic case detection for disease surveillance using data in electronic medical records. Online J Public Health 2011;3.
    • (2011) Online J Public Health , pp. 3
    • Tsui, F.C.1    Wagner, M.M.2    Cooper, G.F.3
  • 19
    • 84906325195 scopus 로고    scopus 로고
    • Building an automated Bayesian case detection system.
    • 9th Annual Conference of the International Society for Disease Surveillance; Park City, UT:
    • Tsui FC, Espino J, Sriburadej T, et al. Building an automated Bayesian case detection system. 9th Annual Conference of the International Society for Disease Surveillance; Park City, UT: 2010.
    • (2010)
    • Tsui, F.C.1    Espino, J.2    Sriburadej, T.3
  • 20
    • 70349470770 scopus 로고    scopus 로고
    • ConText: an algorithm for determining negation, experiencer, and temporal status from clinical reports
    • Harkema H, Dowling JN, Thornblade T, et al. ConText: an algorithm for determining negation, experiencer, and temporal status from clinical reports. J Biomed Inform 2009;42:839-51.
    • (2009) J Biomed Inform , vol.42 , pp. 839-851
    • Harkema, H.1    Dowling, J.N.2    Thornblade, T.3
  • 21
    • 0003505654 scopus 로고
    • Probabilistic similarity networks. Massachusetts Institute of Technology
    • Heckerman D. Probabilistic similarity networks. Massachusetts Institute of Technology, 1991.
    • (1991)
    • Heckerman, D.1
  • 22
    • 34249832377 scopus 로고
    • A Bayesian method for the induction of probabilistic networks from data
    • Cooper GF, Herskovits E. A Bayesian method for the induction of probabilistic networks from data. Mach Learn 1992;9:309-47.
    • (1992) Mach Learn , vol.9 , pp. 309-347
    • Cooper, G.F.1    Herskovits, E.2
  • 23
    • 84964944667 scopus 로고    scopus 로고
    • An efficient Bayesian method for predicting clinical outcomes from genome-wide data
    • Cooper GF, Hennings-Yeomans P, Visweswaran S, et al. An efficient Bayesian method for predicting clinical outcomes from genome-wide data. AMIA Annu Symp Proc 2010:127-31.
    • (2010) AMIA Annu Symp Proc , pp. 127-131
    • Cooper, G.F.1    Hennings-Yeomans, P.2    Visweswaran, S.3
  • 25
    • 0031269184 scopus 로고    scopus 로고
    • On the optimality of the simple Bayesian classifier under zero-one loss
    • Domingos P, Pazzani M. On the optimality of the simple Bayesian classifier under zero-one loss. Mach Learn 1997;29:103-30.
    • (1997) Mach Learn , vol.29 , pp. 103-130
    • Domingos, P.1    Pazzani, M.2
  • 27
    • 0942266011 scopus 로고    scopus 로고
    • Evaluation of a deidentification (De-Id) software engine to share pathology reports and clinical documents for research
    • Gupta D, Saul M, Gilbertson J. Evaluation of a deidentification (De-Id) software engine to share pathology reports and clinical documents for research. Am J Clin Pathol 2004;121:176-86.
    • (2004) Am J Clin Pathol , vol.121 , pp. 176-186
    • Gupta, D.1    Saul, M.2    Gilbertson, J.3
  • 28
    • 0003448310 scopus 로고    scopus 로고
    • Bayesian networks and decision graphs.
    • 2nd edn. Springer
    • Jensen FV, Nielsen TD. Bayesian networks and decision graphs. 2nd edn. Springer, 2007.
    • (2007)
    • Jensen, F.V.1    Nielsen, T.D.2
  • 29
    • 0003991665 scopus 로고
    • An Introduction to the bootstrap.
    • Chapman & Hall/CRC
    • Efron B, Tibshirani R. An Introduction to the bootstrap. Chapman & Hall/CRC, 1994.
    • (1994)
    • Efron, B.1    Tibshirani, R.2
  • 30
    • 0023710206 scopus 로고
    • Comparing the areas under two or more correlated receiver operating characteristic curves: a nonparametric approach
    • DeLong ER, DeLong DM, Clarke-Pearson D. Comparing the areas under two or more correlated receiver operating characteristic curves: a nonparametric approach. Biometrics 1988;44:837-45.
    • (1988) Biometrics , vol.44 , pp. 837-845
    • DeLong, E.R.1    DeLong, D.M.2    Clarke-Pearson, D.3
  • 31
    • 79952709519 scopus 로고    scopus 로고
    • pROC: an open-source package for R and S+ to analyze and compare ROC curves
    • Robin X, Turck N, Hainard A, et al. pROC: an open-source package for R and S+ to analyze and compare ROC curves. BMC Bioinformatics 2011;12:77.
    • (2011) BMC Bioinformatics , vol.12 , pp. 77
    • Robin, X.1    Turck, N.2    Hainard, A.3
  • 32
    • 84944811700 scopus 로고
    • The use of ranks to avoid the assumption of normality implicit in the analysis of variance
    • Friedman M. The use of ranks to avoid the assumption of normality implicit in the analysis of variance. J Am Statist Assoc 1937;32:675-701.
    • (1937) J Am Statist Assoc , vol.32 , pp. 675-701
    • Friedman, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.