-
4
-
-
84891773495
-
Can rnaseq resolve the rapid radiation of advanced moths and butterflies (Hexapoda: Lepidoptera: Apoditrysia)? Anexploratory study
-
Bazinet A.L., Cummings M.P., Mitter K.T., Mitter C.W. 2013. Can RNASeq resolve the rapid radiation of advanced moths and butterflies (Hexapoda: Lepidoptera: Apoditrysia)?Anexploratory study. PLoS ONE 8:e82615.
-
(2013)
PLoS ONE
, vol.8
-
-
Bazinet, A.L.1
Cummings, M.P.2
Mitter, K.T.3
Mitter, C.W.4
-
7
-
-
0026562079
-
The number of replications needed for accurate estimation of the bootstrap p value in phylogenetic studies
-
Hedges S.B. 1992. The number of replications needed for accurate estimation of the bootstrap P value in phylogenetic studies. Mol. Biol. Evol. 9:366-9.
-
(1992)
Mol. Biol. Evol
, vol.9
, pp. 366-369
-
-
Hedges, S.B.1
-
8
-
-
79959483061
-
Increased gene sampling provides stronger support for higherlevel groups within gracillariid leaf mining moths and relatives (lepidoptera: Gracillariidae)
-
Kawahara A., Ohshima I., Kawakita A., Regier J., Mitter C., Cummings M., Davis D., Wagner D., De Prinis J., Lopez-Vaamonde C. 2011. Increased gene sampling provides stronger support for higherlevel groups within gracillariid leaf mining moths and relatives (Lepidoptera: Gracillariidae). BMC Evol. Biol. 11:182.
-
(2011)
BMC Evol. Biol
, vol.11
, pp. 182
-
-
Kawahara, A.1
Ohshima, I.2
Kawakita, A.3
Regier, J.4
Mitter, C.5
Cummings, M.6
Davis, D.7
Wagner, D.8
De Prinis, J.9
Lopez-Vaamonde, C.10
-
9
-
-
70749083848
-
AIR: A batch-oriented web program package for construction of supermatrices ready for phylogenomic analyses
-
Kumar S., Skjaeveland A., Orr R.J.S., Enger P., Ruden T., Mevik B.-H., Burki F., Botnen A., Shalchian-Tabrizi K. 2009. AIR: a batch-oriented web program package for construction of supermatrices ready for phylogenomic analyses. BMC Bioinformatics 10:357.
-
(2009)
BMC Bioinformatics
, vol.10
, pp. 357
-
-
Kumar, S.1
Skjaeveland, A.2
Orr, R.J.S.3
Enger, P.4
Ruden, T.5
Mevik, B.-H.6
Burki, F.7
Botnen, A.8
Shalchian-Tabrizi, K.9
-
10
-
-
0344896549
-
NCL: A c++ class library for interpreting data files in nexus format
-
Lewis P.O. 2003. NCL: a C++ class library for interpreting data files in NEXUS format. Bioinformatics 19:2330-2331.
-
(2003)
Bioinformatics
, vol.19
, pp. 2330-2331
-
-
Lewis, P.O.1
-
11
-
-
0024138827
-
Condor - A hunter of idle workstations
-
Litzkow M., Livny M., Mutka M. 1988. Condor-a hunter of idle workstations. In Distributed Computing Systems, 1988., 8th International Conference on, p. 104-111.
-
(1988)
Distributed Computing Systems, 1988., 8th International Conference on
, pp. 104-111
-
-
Litzkow, M.1
Livny, M.2
Mutka, M.3
-
13
-
-
0042101429
-
Necessity is the mother of invention: A simple grid computing system using commodity tools
-
Myers D. Cummings M. 2003. Necessity is the mother of invention: a simple grid computing system using commodity tools. J. Parallel Distr. Com. 63:578-589.
-
(2003)
J. Parallel Distr. Com
, vol.63
, pp. 578-589
-
-
Myers, D.1
Cummings, M.2
-
14
-
-
70449403422
-
Mobyle: A new full web bioinformatics framework
-
Néron B., Ménager H., Maufrais C., Joly N., Maupetit J., Letort S., Carrere S., Tuffery P., Letondal C. 2009. Mobyle: a new full web bioinformatics framework. Bioinformatics 25:3005-11.
-
(2009)
Bioinformatics
, vol.25
, pp. 3005-3011
-
-
Néron, B.1
Ménager, H.2
Maufrais, C.3
Joly, N.4
Maupetit, J.5
Letort, S.6
Carrere, S.7
Tuffery, P.8
Letondal, C.9
-
15
-
-
77950820827
-
How many bootstrap replicates are necessary?
-
Pattengale N.D., Alipour M., Bininda-Emonds O.R.P., Moret B.M.E., Stamatakis A. 2010. How many bootstrap replicates are necessary? J. Comput. Biol. 17:337-54.
-
(2010)
J. Comput. Biol
, vol.17
, pp. 337-354
-
-
Pattengale, N.D.1
Alipour, M.2
Bininda-Emonds, O.R.P.3
Moret, B.M.E.4
Stamatakis, A.5
-
16
-
-
83455163865
-
The energy and emergy of the internet
-
Raghavan B. Ma J. 2011. The energy and emergy of the Internet. In HotNets. p. 9.
-
(2011)
HotNets
, pp. 9
-
-
Raghavan, B.1
Ma, J.2
-
17
-
-
84874884729
-
A largescale, higher-level, molecular phylogenetic study of the insect order lepidoptera (moths and butterflies)
-
Regier J.C. Mitter C., Zwick A., Bazinet A.L., Cummings M.P., Kawahara A.Y., Sohn J.-C., Zwickl D.J., Cho S., Davis D.R., Baixeras J., Brown J., Parr C., Weller S., Lees D.C., Mitter K.T. 2013. A largescale, higher-level, molecular phylogenetic study of the insect order Lepidoptera (moths and butterflies). PLoS ONE 8:e58568.
-
(2013)
PLoS ONE
, vol.8
-
-
Regier, J.C.1
Mitter, C.2
Zwick, A.3
Bazinet, A.L.4
Cummings, M.P.5
Kawahara, A.Y.6
Sohn, J.-C.7
Zwickl, D.J.8
Cho, S.9
Davis, D.R.10
Baixeras, J.11
Brown, J.12
Parr, C.13
Weller, S.14
Lees, D.C.15
Mitter, K.T.16
-
18
-
-
72949097264
-
Toward reconstructing the evolution of advanced moths and butterflies (Lepidoptera: Ditrysia): An initial molecular study
-
Regier J.C., Zwick A., Cummings M.P., Kawahara A.Y., Cho S., Weller S., Roe A., Baixeras J., Brown J.W., Parr C., Davis D.R., Epstein M., Hallwachs W., Hausmann A., Janzen D.H., Kitching I.J., Solis M.A., Yen S.-H., Bazinet A.L., Mitter C. 2009. Toward reconstructing the evolution of advanced moths and butterflies (Lepidoptera: Ditrysia): an initial molecular study. BMC Evol. Biol. 9:280.
-
(2009)
BMC Evol. Biol
, vol.9
, pp. 280
-
-
Regier, J.C.1
Zwick, A.2
Cummings, M.P.3
Kawahara, A.Y.4
Cho, S.5
Weller, S.6
Roe, A.7
Baixeras, J.8
Brown, J.W.9
Parr, C.10
Davis, D.R.11
Epstein, M.12
Hallwachs, W.13
Hausmann, A.14
Janzen, D.H.15
Kitching, I.J.16
Solis, M.A.17
Yen, S.-H.18
Bazinet, A.L.19
Mitter, C.20
more..
-
19
-
-
0019424782
-
Comparison of phylogenetic trees
-
Robinson D.R. Foulds L.R. 1981. Comparison of phylogenetic trees. Math. Biosci. 53:131-147.
-
(1981)
Math. Biosci
, vol.53
, pp. 131-147
-
-
Robinson, D.R.1
Foulds, L.R.2
-
20
-
-
79959944060
-
Phylemon 2.0: A suite of web-tools for molecular evolution, phylogenetics, phylogenomics and hypotheses testing
-
Sánchez R., Serra F., Tárraga J., Medina I., Carbonell J., Pulido L., de María A., Capella-Gutíerrez S., Huerta-Cepas J., Gabaldón T., Dopazo J., Dopazo H. 2011. Phylemon 2.0: a suite of web-tools for molecular evolution, phylogenetics, phylogenomics and hypotheses testing. Nucleic Acids Res. 39:W470-W474.
-
(2011)
Nucleic Acids Res
, vol.39
-
-
Sánchez, R.1
Serra, F.2
Tárraga, J.3
Medina, I.4
Carbonell, J.5
Pulido, L.6
De María, A.7
Capella-Gutíerrez, S.8
Huerta-Cepas, J.9
Gabaldón, T.10
Dopazo, J.11
Dopazo, H.12
-
21
-
-
84873163902
-
A molecular phylogeny for yponomeutoidea (insecta, lepidoptera, ditrysia) and its implications for classification, biogeography and the evolution of host plant use
-
Sohn J.-C., Regier J.C., Mitter C., Davis D., Landry J.-F., Zwick A., Cummings M.P. 2013. A molecular phylogeny for Yponomeutoidea (Insecta, Lepidoptera, Ditrysia) and its implications for classification, biogeography and the evolution of host plant use. PLoS ONE 8:e55066.
-
(2013)
PLoS ONE
, vol.8
-
-
Sohn, J.-C.1
Regier, J.C.2
Mitter, C.3
Davis, D.4
Landry, J.-F.5
Zwick, A.6
Cummings, M.P.7
-
22
-
-
77954202497
-
DendroPy: A python library for phylogenetic computing
-
Sukumaran J. Holder M.T. 2010. DendroPy: a Python library for phylogenetic computing. Bioinformatics 26:1569-1571.
-
(2010)
Bioinformatics
, vol.26
, pp. 1569-1571
-
-
Sukumaran, J.1
Holder, M.T.2
-
24
-
-
84873206192
-
-
Zwickl D.J. 2011. GARLI 2.0 https://www.nescent.org/wg-garli/main-page.
-
(2011)
GARLI 2.0
-
-
Zwickl, D.J.1
|