HIV-1 genetic variants in the Russian far east

AIDS Research and Human Retroviruses

Volumn 30, Issue 8, 2014, Pages 742-752

  Kazennova, Elena ^a   Laga, Vita ^a   Lapovok, Ilya ^a   Glushchenko, Nataliya ^a   Neshumaev, Dmitry ^b   Vasilyev, Alexander ^a   Bobkova, Marina ^a  

^a D I IVANOVSKY INSTITUTE OF VIROLOGY   (Russian Federation)

^b Krasnoyarsk Reg Ctr AIDS P   (Russian Federation)

Author keywords

[No Author keywords available]

Indexed keywords

AFRICA; ARTICLE; ASIA; CHINA; CHINESE; FAR EAST; GENE CLUSTER; GENE SEQUENCE; GENETIC VARIABILITY; HUMAN; HUMAN CELL; HUMAN IMMUNODEFICIENCY VIRUS 1; HUMAN IMMUNODEFICIENCY VIRUS 1 INFECTION; JAPAN; MAJOR CLINICAL STUDY; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PREVALENCE; PRIORITY JOURNAL; RUSSIAN FEDERATION; UKRAINE; USSR; UZBEKISTAN; VIRUS RECOMBINANT; CLASSIFICATION; DNA SEQUENCE; FEMALE; GENETICS; GENOTYPE; HUMAN IMMUNODEFICIENCY VIRUS INFECTION; ISOLATION AND PURIFICATION; MALE; MOLECULAR GENETICS; VIROLOGY;

FAR EAST; FEMALE; GENETIC VARIATION; GENOTYPE; HIV INFECTIONS; HIV-1; HUMANS; MALE; MOLECULAR SEQUENCE DATA; RUSSIA; SEQUENCE ANALYSIS, DNA;

EID: 84905449732     PISSN: 08892229     EISSN: 19318405     Source Type: Journal    
DOI: 10.1089/aid.2013.0194     Document Type: Article

References (28)

1. Bobkov AF, Pokrovskii VV, Selimova LM, et al.: [Geno-typing and phylogenetic analysis of HIV-1 isolates circulating in Russia]. Vopr Virusol 1997;42(1):13-16.
2. Bobkov AF, Pokrovskii VV, Selimova LM, et al.: [Genetic characteristics of variants of human immunodeficiency virus type 1, causing an epidemic among substance abusers in Commonwealth of Independent States countries]. Vopr Virusol 1998;43(6):253-256.
3. Thomson MM, de Parga EV, Vinogradova A, et al.: New insights into the origin of the HIV type 1 subtype A epidemic in former Soviet Union's countries derived from sequence analyses of preepidemically transmitted viruses. AIDS Res Hum Retroviruses 2007;23(12):1599-1604.
4. Bobkov A, Cheingsong-Popov R, Selimova L, et al.: An HIV type 1 epidemic among injecting drug users in the former Soviet Union caused by a homogeneous subtype A strain. AIDS Res Hum Retroviruses 1997;13(14):1195-1201.
5. Riva C, Romano L, Saladini F, et al.: Identification of a possible ancestor of the subtype A1 HIV Type 1 variant circulating in the former Soviet Union. AIDS Res Hum Retroviruses 2008;24(10):1319-1325.
6. Lazouskaya NV, Eremin VF, Adema KW, et al.: The HIV type 1 epidemic in Belarus: Predominance of Eastern European subtype A strains and circulation of subtype B viruses. AIDS Res Hum Retroviruses 2005;21(9):830-833.
7. Bobkov AF, Kazennova EV, Sukhanova AL, et al.: An HIV type 1 subtype A outbreak among injecting drug users in Kazakhstan. AIDS Res Hum Retroviruses 2004;20(10): 1134-1136.
8. Laga V, Kazennova EV, Vasil'ev AV, et al.: [Molecular-genetic characterization of the HIV-1 variants abundant in Kirghizia]. Vopr Virusol 2012;57(5):26-32.
9. Bobkov A, Kazennova E, Selimova L, et al.: A sudden epidemic of HIV type 1 among injecting drug users in the former Soviet Union: Identification of subtype A, subtype B, and novel gagA/envB recombinants. AIDS Res Hum Retroviruses 1998;14(8):669-676.
10. Masharsky AE, Klimov NA, and Kozlov AP: Molecular cloning and analysis of full-length genome of HIV type 1 strains prevalent in countries of the former Soviet Union. AIDS Res Hum Retroviruses 2003;19(10):933-939.
11. Saad MD, Shcherbinskaya AM, Nadai Y, et al.: Molecular epidemiology of HIV Type 1 in Ukraine: Birthplace of an epidemic. AIDS Res Hum Retroviruses 2006;22(8): 709-714.
12. Smolskaya T, Liitsola K, Zetterberg V, et al.: HIV epidemiology in the Northwestern Federal District of Russia: Dominance of HIV type 1 subtype A. AIDS Res Hum Retroviruses 2006;22(11):1074-1080.
13. Dement'eva N, Sizova N, Lisitsyna Z, et al.: Analysis of HIV subtypes and drug-resistant variants circulating in Saint-Petersburg. HIV Infect Immune Disorders 2011; 3( 4): 34-43.
14. Kazennova E, Vasilyev A, Lapovok I, et al.: HIV-1 genetic variants in Asian part of Russia: Study 2005-2010. Vopr Virusol 2013;58(4):28-35.
15. Bobkova M: Current status of HIV-1 diversity and drug resistance monitoring in the former USSR. AIDS Rev 2013;15(4):204-212.
16. Baryshev PB, Bogachev VV, and Gashnikova NM: Genetic characterization of an isolate of HIV type 1 AG recombinant form circulating in Siberia, Russia. Arch Virol 2012; 157(12):2335-2341.
17. Gashnikova NM, Totmenin AV, Bocharov EF, et al.: [New recombinant variant of human immunodeficiency virus of type 1, subtype envB/envA, isolated in Novosibirsk]. Zh Mikrobiol Epidemiol Immunobiol 2004;(5):53-58.
18. UNAIDS: Report on the global AIDS epidemic, 2008.
19. HIV & AIDS in China, 2013; Available from www.avert .org/aidschina.htm.
20. Masaki I. The current situation of HIV/AIDS epidemic in Japan, 2012. Available from www.ajf.gr.jp/aidsinjapan/stats.htm.
21. Li Z, He X, Wang Z, et al.: Tracing the origin and history of the HIV-1 subtype B¢ epidemic by near full-length genome analyses. AIDS 2012;26(7):877-884.
22. Liao L, Xing H, Shang H, et al.: The prevalence of transmitted antiretroviral drug resistance in treatment-naive HIV-infected individuals in China. J Acquir Immune Defic Syndr 2010;53(Suppl 1):S10-14.
23. Kojima Y, Kawahata T, Mori H, et al.: Prevalence and epidemiological traits of HIV infections in populations with high-risk behaviours as revealed by genetic analysis of HBV. Epidemiol Infect 2013;141(11):2410-2417.
24. Tamura K, Peterson D, Peterson N, et al.: MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 2011;28(10):2731-2739.
25. Carr JK, Nadai Y, Eyzaguirre L, et al.: Outbreak of a West African recombinant of HIV-1 in Tashkent, Uzbekistan. J Acquir Immune Defic Syndr 2005;39(5):570-575.
26. Kurbanov F, Kondo M, Tanaka Y, et al.: Human immunodeficiency virus in Uzbekistan: Epidemiological and genetic analyses. AIDS Res Hum Retroviruses 2003;19(9): 731-738.
27. Laga V, Lapovok I, and Vasilyev A: CRF02-AG recombinants in Russia and Central Asia countries. 14th European AIDS Conference, October 16-19, 2013, Brussels, Belgium.
28. Bennett DE, Camacho RJ, Otelea D, et al.: Drug resistance mutations for surveillance of transmitted HIV-1 drug-resistance: 2009 update. PLoS One 2009;4(3):e4724.