Biological and molecular characterisation of Bidens mosaic virus supports its assignment as a member of a distinct species in the genus Potyvirus

Archives of Virology

Volumn 159, Issue 8, 2014, Pages 2181-2183

  Sanches, Marcio Martinello ^a,b   De Marchi, Bruno R ^a   Spadotti, David Marques ^a   Nozaki, Denise Nakada ^a   Pavan, Marcelo A ^a   Krause Sakate, Renate ^a  

^a SÃO PAULO STATE UNIVERSITY UNESP   (Brazil)

^b EMBRAPA RECURSOS GENÉTICOS E BIOTECNOLOGIA   (Brazil)

Author keywords

[No Author keywords available]

Indexed keywords

BIDENS; BIDENS MOSAIC VIRUS; HELIANTHUS; POTATO VIRUS Y; POTYVIRUS; SUNFLOWER CHLOROTIC MOTTLE VIRUS;

VIRUS PROTEIN;

BIDENS; CLASSIFICATION; GENETICS; ISOLATION AND PURIFICATION; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; PLANT DISEASE; POTYVIRUS; VIROLOGY; VIRUS GENOME;

BASE SEQUENCE; BIDENS; GENOME, VIRAL; MOLECULAR SEQUENCE DATA; PHYLOGENY; PLANT DISEASES; POTYVIRUS; VIRAL PROTEINS;

EID: 84905263095     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-014-2047-x     Document Type: Article

References (21)

1. Kitajima EW, Carvalho AMB, Costa AS (1961) Morfologia do vírus do mosaico do picão. Bragantia 20: 503-512.
2. Costa AS, Kitajima EW (1966) Virus do mosaico do picão ataca girassol. Supl Agric "O Estado de São Paulo", São Paulo pp 12-13.
3. Rodrigues MGR, Marinho VLA, Ribeiro SG, Kitajima EW (1991) Mosaico em margarida-amarela (Coreopsis lanceolata) causada pelo Vírus do Mosaico do Picão. Fitopatol Bras 16: 114-117.
4. Nagata T, Inoue AK, Dusi AN, Kitajima EW (1995) Bidens mosaic potyvirus newly isolated from pea, its characteristics and serological relationship with other potyviruses. Fitopatol Bras 20: 473-478.
5. Suzuki GS, Rosa RAC, Sanches MM, Nozaki DN, Pavan MA, Krause-Sakate R (2009) Caracterização de um isolado de Bidens mosaic virus proveniente de alface. Summa Phytopathol 35: 231-233.
6. Sanches MM, Spadotti DMA, De Marchi BR, Pavan MA, Krause-Sakate R (2010) Bidens mosaic virus: detection by RT-PCR and identification of Galinsoga parviflora as a new natural host of the virus. Summa Phytopathol 36: 304-307.
7. Adams MJ, Zerbini FM, French R, Rabenstein F, Stenger DC, Valkonen JPT (2012) Potyviridae, pp. 1069-1089. In: King AMQ, Adams MJ, Carstens EB (eds) Virus taxonomy: 9th report of the international committee on the taxonomy of viruses. Elsevier, San Diego.
8. Inoue-Nagata AK, Oliveira PA, Dutra LS, Nagata T (2006) Bidens mosaic virus is a member of the Potato virus Y species. Virus Genes 33: 45-49.
9. Ha C, Coombs S, Revill PA, Harding RM, Vu M, Dale JL (2008) Design and application of two novel degenerate primer pairs for the detection and complete genomic characterization of potyviruses. Arch Virol 153: 25-36.
10. Pappu SS, Brand R, Pappu HR, Rybicki EP, Gough KH, Frenkel MJ, Niblett CL (1993) A polymerase chain reaction method adapted for selective amplification and cloning of 3' sequences of potyviral genomes: application to Dasheen mosaic-virus. J Virol Methods 41: 9-20.
11. Zheng L, Wayper PJ, Gibbs AJ, Fourment M, Rodoni BC, Gibbs MJ (2008) Accumulating variation at conserved sites in potyvirus genomes is driven by species discovery and affects degenerate primer design. Plos One 3 doi: 10. 1371/journal. pone. 0001586.
12. Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL-W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680.
13. Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28: 2731-2739.
14. Martin DP, Lemey P, Lott M, Moulton V, Posada D, Lefeuvre P (2010) RDP3: a flexible and fast computer program for analyzing recombination. Bioinformatics 26: 2462-2463.
15. Kuhn GB, Lin MT, Costa CL (1980) Transmissão, círculo de hospedeiras e sintomatologia do vírus do mosaico do picão. Fitopatol Bras 5: 39-50.
16. Adams MJ, Antoniw JF, Beaudoin F (2005) Overview and analysis of the polyprotein cleavage sites in the family Potyviridae. Mol Plant Pathol 6: 471-487.
17. Chung BYW, Miller WA, Atkins JF, Firth AE (2008) An overlapping essential gene in the Potyviridae. Proc Natl Acad Sci USA 105: 5897-5902.
18. Bejerman N, Giolitti F, de Breuil S, Lenardon S (2010) Molecular characterization of Sunflower chlorotic mottle virus: a member of a distinct species in the genus Potyvirus. Arch Virol 155: 1331-1335.
19. Purciful DE, Christie SR, Zitter TA, Bassett MJ (1971) Natural infection of lettuce and endive by Bidens mottle virus. Plant Dis Rep 55: 1061.
20. Dujovny G, Usugi T, Shohara K, Lenardon S (1998) Characterization of a potyvirus infecting sunflower in Argentina. Plant Dis 82: 470-474.
21. Maritan AC, Gaspar JO, Camargo LEA (2004) Identificação e caracterização de um potyvirus isolado de Zinnia elegans. Fitopatol Bras 29: 28-33.