-
1
-
-
79953204662
-
ORS1, an H2O2-responsive nac transcription factor, controls senescence in Arabidopsis thaliana
-
Balazadeh S, Kwasniewski M, Caldana C, Mehrnia M, Zanor MaIs, Xue GP, Mueller-Roeber B. 2011. ORS1, an H2O2-responsive nac transcription factor, controls senescence in Arabidopsis thaliana. Molecular Plant 4, 346-360.
-
(2011)
Molecular Plant
, vol.4
, pp. 346-360
-
-
Balazadeh, S.1
Kwasniewski, M.2
Caldana, C.3
Mehrnia, M.4
Mais, Z.5
Xue, G.P.6
Mueller-Roeber, B.7
-
3
-
-
79955626693
-
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation
-
Breeze E, Harrison E, McHattie S, et al. 2011. High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. The Plant Cell 23, 873-894.
-
(2011)
The Plant Cell
, vol.23
, pp. 873-894
-
-
Breeze, E.1
Harrison, E.2
McHattie, S.3
-
4
-
-
72749086875
-
C4 acid decarboxylases required for C4 photosynthesis are active in the mid-vein of the C3 species Arabidopsis thaliana, and are important in sugar and amino acid metabolism
-
Brown NJ, Palmer BG, Stanley S, et al. 2010. C4 acid decarboxylases required for C4 photosynthesis are active in the mid-vein of the C3 species Arabidopsis thaliana, and are important in sugar and amino acid metabolism. The Plant Journal 61, 122-133.
-
(2010)
The Plant Journal
, vol.61
, pp. 122-133
-
-
Brown, N.J.1
Palmer, B.G.2
Stanley, S.3
-
5
-
-
0344475308
-
The molecular analysis of leaf senescence-a genomics approach
-
Buchanan-Wollaston V, Earl S, Harrison E, Mathas E, Navabpour S, Page T, Pink D. 2003. The molecular analysis of leaf senescence-a genomics approach. Plant Biotechnology Journal 1, 3-22.
-
(2003)
Plant Biotechnology Journal
, vol.1
, pp. 3-22
-
-
Buchanan-Wollaston, V.1
Earl, S.2
Harrison, E.3
Mathas, E.4
Navabpour, S.5
Page, T.6
Pink, D.7
-
6
-
-
21144449190
-
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis
-
Buchanan-Wollaston V, Page T, Harrison E, et al. 2005. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. The Plant Journal 42, 567-585.
-
(2005)
The Plant Journal
, vol.42
, pp. 567-585
-
-
Buchanan-Wollaston, V.1
Page, T.2
Harrison, E.3
-
7
-
-
80051782110
-
Characterization of barley (Hordeum vulgare L.) NAC transcription factors suggests conserved functions compared to both monocots and dicots
-
Christiansen M, Holm P, Gregersen P. 2011. Characterization of barley (Hordeum vulgare L.) NAC transcription factors suggests conserved functions compared to both monocots and dicots. BMC Research Notes 4, 302.
-
(2011)
BMC Research Notes
, vol.4
, pp. 302
-
-
Christiansen, M.1
Holm, P.2
Gregersen, P.3
-
8
-
-
75849154284
-
HTqPCR: High-throughput analysis and visualization of quantitative real-time PCR data in R
-
Dvinge H, Bertone P. 2009. HTqPCR: High-throughput analysis and visualization of quantitative real-time PCR data in R. Bioinformatics 25, 3325-3326.
-
(2009)
Bioinformatics
, vol.25
, pp. 3325-3326
-
-
Dvinge, H.1
Bertone, P.2
-
9
-
-
33847321126
-
A combined strategy of in silico transcriptome analysis and web search engine optimization allows an agile identification of reference genes suitable for normalization in gene expression studies
-
Faccioli P, Ciceri G, Provero P, Stanca A, Morcia C, Terzi V. 2007. A combined strategy of in silico transcriptome analysis and web search engine optimization allows an agile identification of reference genes suitable for normalization in gene expression studies. Plant Molecular Biology 63, 679-688.
-
(2007)
Plant Molecular Biology
, vol.63
, pp. 679-688
-
-
Faccioli, P.1
Ciceri, G.2
Provero, P.3
Stanca, A.4
Morcia, C.5
Terzi, V.6
-
11
-
-
79953300078
-
FIMO: Scanning for occurrences of a given motif
-
Grant CE, Bailey TL, Noble WS. 2011. FIMO: Scanning for occurrences of a given motif. Bioinformatics 27, 1017-1018.
-
(2011)
Bioinformatics
, vol.27
, pp. 1017-1018
-
-
Grant, C.E.1
Bailey, T.L.2
Noble, W.S.3
-
13
-
-
33845735104
-
Transcriptome analysis of senescence in the flag leaf of wheat (Triticum aestivum L.)
-
Gregersen PL, Holm PB. 2007. Transcriptome analysis of senescence in the flag leaf of wheat (Triticum aestivum L.). Plant Biotechnology Journal 5, 192-206.
-
(2007)
Plant Biotechnology Journal
, vol.5
, pp. 192-206
-
-
Gregersen, P.L.1
Holm, P.B.2
-
14
-
-
47649115607
-
Leaf senescence and nutrient remobilisation in barley and wheat
-
Gregersen PL, Holm PB, Krupinska K. 2008. Leaf senescence and nutrient remobilisation in barley and wheat. Plant Biology 10, 37-49.
-
(2008)
Plant Biology
, vol.10
, pp. 37-49
-
-
Gregersen, P.L.1
Holm, P.B.2
Krupinska, K.3
-
15
-
-
33646231520
-
AtNAP, a NAC family transcription factor, has an important role in leaf senescence
-
Guo YF, Gan SS. 2006. AtNAP, a NAC family transcription factor, has an important role in leaf senescence. The Plant Journal 46, 601-612.
-
(2006)
The Plant Journal
, vol.46
, pp. 601-612
-
-
Guo, Y.F.1
Gan, S.S.2
-
16
-
-
84870265846
-
A physical, genetic and functional sequence assembly of the barley genome
-
International Barley Genome Sequencing Consortium
-
International Barley Genome Sequencing Consortium. 2012. A physical, genetic and functional sequence assembly of the barley genome. Nature, 491: 711-716.
-
(2012)
Nature
, vol.491
, pp. 711-716
-
-
-
17
-
-
37349079198
-
Comparative transcriptome profiling of nearisogenic barley (Hordeum vulgare) lines differing in the allelic state of a major grain protein content locus identifies genes with possible roles in leaf senescence and nitrogen reallocation
-
Jukanti AK, Heidlebaugh NM, Parrott DL, Fischer IA, McInnerney K, Fischer AM. 2008. Comparative transcriptome profiling of nearisogenic barley (Hordeum vulgare) lines differing in the allelic state of a major grain protein content locus identifies genes with possible roles in leaf senescence and nitrogen reallocation. New Phytologist 177, 333-349.
-
(2008)
New Phytologist
, vol.177
, pp. 333-349
-
-
Jukanti, A.K.1
Heidlebaugh, N.M.2
Parrott, D.L.3
Fischer, I.A.4
McInnerney, K.5
Fischer, A.M.6
-
18
-
-
24644486608
-
Changes in the cellular and subcellular localization of glutamine synthetase and glutamate dehydrogenase during flag leaf senescence in wheat (Triticum aestivum L.)
-
Kichey T, Le Gouis J, Sangwan B, Hirel B, Dubois F. 2005. Changes in the cellular and subcellular localization of glutamine synthetase and glutamate dehydrogenase during flag leaf senescence in wheat (Triticum aestivum L.). Plant and Cell Physiology 46, 964-974.
-
(2005)
Plant and Cell Physiology
, vol.46
, pp. 964-974
-
-
Kichey, T.1
Le Gouis, J.2
Sangwan, B.3
Hirel, B.4
Dubois, F.5
-
19
-
-
60749101298
-
Trifurcate feed-forward regulation of age-dependent cell death involving miR164 in Arabidopsis
-
Kim JH, Woo HR, Kim J, Lim PO, Lee IC, Choi SH, Hwang D, Nam HG. 2009. Trifurcate feed-forward regulation of age-dependent cell death involving miR164 in Arabidopsis. Science 323, 1053-1057.
-
(2009)
Science
, vol.323
, pp. 1053-1057
-
-
Kim, J.H.1
Woo, H.R.2
Kim, J.3
Lim, P.O.4
Lee, I.C.5
Choi, S.H.6
Hwang, D.7
Nam, H.G.8
-
20
-
-
84904997719
-
Bioconductor-package SLqPCR: Functions for analysis of real-time quantitative
-
Kohl M. 2007. Bioconductor-package SLqPCR: Functions for analysis of real-time quantitative. PCR data at SIRS-Lab GmbH.
-
(2007)
PCR Data at SIRS-Lab GmbH
-
-
Kohl, M.1
-
21
-
-
84905023071
-
The dynamic role of chloroplasts in integrating plant growth and development
-
Biswal B, Krupinska K, Biswal UC, eds Dordrecht, The Netherlands: Springer
-
Krupinska K, Biswal U, Biswal B. 2013. The dynamic role of chloroplasts in integrating plant growth and development. In: Biswal B, Krupinska K, Biswal UC, eds. Plastid development in leaves during growth and senescence. Dordrecht, The Netherlands: Springer, 3-16.
-
(2013)
Plastid Development in Leaves during Growth and Senescence
, pp. 3-16
-
-
Krupinska, K.1
Biswal, U.2
Biswal, B.3
-
22
-
-
84861526258
-
A NAC transcription factor NTL4 promotes reactive oxygen species production during droughtinduced leaf senescence in Arabidopsis
-
Lee S, Seo PJ, Lee HJ, Park CM. 2012. A NAC transcription factor NTL4 promotes reactive oxygen species production during droughtinduced leaf senescence in Arabidopsis. The Plant Journal 70, 831-844.
-
(2012)
The Plant Journal
, vol.70
, pp. 831-844
-
-
Lee, S.1
Seo, P.J.2
Lee, H.J.3
Park, C.M.4
-
23
-
-
77957068711
-
Chlorophylls and carotenoids-pigments of photosynthetic biomembranes
-
Lichtenthaler HK. 1987. Chlorophylls and carotenoids-pigments of photosynthetic biomembranes. Methods in Enzymology 148, 350-382.
-
(1987)
Methods in Enzymology
, vol.148
, pp. 350-382
-
-
Lichtenthaler, H.K.1
-
24
-
-
0028134248
-
Molecular analysis of natural leaf senescence in Arabidopsis thaliana
-
Lohman KN, Gan S, John MC, Amasino RM. 1994. Molecular analysis of natural leaf senescence in Arabidopsis thaliana. Physiologia Plantarum 92, 322-328.
-
(1994)
Physiologia Plantarum
, vol.92
, pp. 322-328
-
-
Lohman, K.N.1
Gan, S.2
John, M.C.3
Amasino, R.M.4
-
26
-
-
79956012836
-
Comprehensive sequence analysis of 24,783 barley full-length cDNAs derived from 12 clone libraries
-
Matsumoto T, Tanaka T, Sakai H, et al. 2011. Comprehensive sequence analysis of 24,783 barley full-length cDNAs derived from 12 clone libraries. Plant Physiology 156, 20-28.
-
(2011)
Plant Physiology
, vol.156
, pp. 20-28
-
-
Matsumoto, T.1
Tanaka, T.2
Sakai, H.3
-
27
-
-
79956139639
-
Global landscape of a co-expressed gene network in barley and its application to gene discovery in Triticeae crops
-
Mochida K, Uehara-Yamaguchi Y, Yoshida T, Sakurai T, Shinozaki K. 2011. Global landscape of a co-expressed gene network in barley and its application to gene discovery in Triticeae crops. Plant and Cell Physiology 52, 785-803.
-
(2011)
Plant and Cell Physiology
, vol.52
, pp. 785-803
-
-
Mochida, K.1
Uehara-Yamaguchi, Y.2
Yoshida, T.3
Sakurai, T.4
Shinozaki, K.5
-
28
-
-
84856594358
-
NAC transcription factors in plant abiotic stress responses
-
Nakashima K, Takasaki H, Mizoi J, Shinozaki K, Yamaguchi-Shinozaki K. 2012. NAC transcription factors in plant abiotic stress responses. Biochimica et Biophysica Acta 1819, 97-103.
-
(2012)
Biochimica et Biophysica Acta
, vol.1819
, pp. 97-103
-
-
Nakashima, K.1
Takasaki, H.2
Mizoi, J.3
Shinozaki, K.4
Yamaguchi-Shinozaki, K.5
-
29
-
-
0002176722
-
Whole plant senescence
-
Nood LD, Leopold AC, eds San Diego, CA: Academic Press
-
Noodén LD. 1988. Whole plant senescence. In: Nood LD, Leopold AC, eds. Senescence and aging in plants. San Diego, CA: Academic Press, 392-439.
-
(1988)
Senescence and Aging in Plants
, pp. 392-439
-
-
Noodén, L.D.1
-
30
-
-
13744249762
-
NAC transcription factors: Structurally distinct, functionally diverse
-
Olsen AN, Ernst HA, Lo Leggio L, Skriver K. 2005. NAC transcription factors: Structurally distinct, functionally diverse. Trends in Plant Science 10, 79-87.
-
(2005)
Trends in Plant Science
, vol.10
, pp. 79-87
-
-
Olsen, A.N.1
Ernst, H.A.2
Lo Leggio, L.3
Skriver, K.4
-
31
-
-
84863304598
-
-
R Development Core Team R Foundation for Statistical Computing, Vienna, Austria last accessed 12 February 2014
-
R Development Core Team. 2005. R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria, http://www.R-project.org (last accessed 12 February 2014).
-
(2005)
R: A Language and Environment for Statistical Computing
-
-
-
32
-
-
67650140201
-
Development of 5006 full-length cDNAs in barley: A tool for accessing cereal genomics resources
-
Sato K, Shin I, Seki M, Shinozaki K, Yoshida H, Takeda K, Yamazaki Y, Conte M, Kohara Y. 2009. Development of 5006 full-length cDNAs in barley: A tool for accessing cereal genomics resources. DNA Research 16, 81-89.
-
(2009)
DNA Research
, vol.16
, pp. 81-89
-
-
Sato, K.1
Shin, I.2
Seki, M.3
Shinozaki, K.4
Yoshida, H.5
Takeda, K.6
Yamazaki, Y.7
Conte, M.8
Kohara, Y.9
-
33
-
-
84948402768
-
Developmental and hormonal control of leaf senescence
-
Gan S, ed. Oxford: Blackwell Publishing
-
Schippers JHM, Jing H-C, Hille J, Dijkwel PP. 2007. Developmental and hormonal control of leaf senescence. In: Gan S, ed. Senescence processes in plants. Oxford: Blackwell Publishing, 145-170.
-
(2007)
Senescence Processes in Plants
, pp. 145-170
-
-
Schippers, J.H.M.1
Jing, H.-C.2
Hille, J.3
Dijkwel, P.P.4
-
34
-
-
16244362244
-
A gene expression map of Arabidopsis thaliana development
-
Schmid M, Davison TS, Henz SR, Pape UJ, Demar M, Vingron M, Scholkopf B, Weigel D, Lohmann JU. 2005. A gene expression map of Arabidopsis thaliana development. Nature Genetics 37, 501-506.
-
(2005)
Nature Genetics
, vol.37
, pp. 501-506
-
-
Schmid, M.1
Davison, T.S.2
Henz, S.R.3
Pape, U.J.4
Demar, M.5
Vingron, M.6
Scholkopf, B.7
Weigel, D.8
Lohmann, J.U.9
-
35
-
-
33644872577
-
Limma: Linear models for microarray data
-
Gentleman R, Carey V, Dudoit S, Irizarry R, Huber W, eds Springer: New York
-
Smyth GK. 2005. Limma: Linear models for microarray data. In: Gentleman R, Carey V, Dudoit S, Irizarry R, Huber W, eds. Bioinformatics and computational biology solutions using R and Bioconductor. Springer: New York, 397-420..
-
(2005)
Bioinformatics and Computational Biology Solutions Using R and Bioconductor
, pp. 397-420
-
-
Smyth, G.K.1
-
37
-
-
33747882515
-
The high grain protein content gene Gpc-B1 accelerates senescence and has pleiotropic effects on protein content in wheat
-
Uauy C, Brevis JC, Dubcovsky J. 2006. The high grain protein content gene Gpc-B1 accelerates senescence and has pleiotropic effects on protein content in wheat. Journal of Experimental Botany 57, 2785-2794.
-
(2006)
Journal of Experimental Botany
, vol.57
, pp. 2785-2794
-
-
Uauy, C.1
Brevis, J.C.2
Dubcovsky, J.3
-
38
-
-
68249092895
-
A guide to using MapMan to visualize and compare Omics data in plants: A case study in the crop species, Maize
-
Usadel B, Poree F, Nagel A, Lohse M, Czedik-Eysenberg A, Stitt M. 2009. A guide to using MapMan to visualize and compare Omics data in plants: A case study in the crop species, Maize. Plant, Cell and Environment 32, 1211-1229.
-
(2009)
Plant, Cell and Environment
, vol.32
, pp. 1211-1229
-
-
Usadel, B.1
Poree, F.2
Nagel, A.3
Lohse, M.4
Czedik-Eysenberg, A.5
Stitt, M.6
-
39
-
-
84862170759
-
DNA binding by the plant-specific NAC transcription factors in crystal and solution: A firm link to WRKY and GCM transcription factors
-
Welner DH, Lindemose S, Grossmann JG, Mollegaard NE, Olsen AN, Helgstrand C, Skriver K, Lo Leggio L. 2012. DNA binding by the plant-specific NAC transcription factors in crystal and solution: A firm link to WRKY and GCM transcription factors. Biochemical Journal 444, 395-404.
-
(2012)
Biochemical Journal
, vol.444
, pp. 395-404
-
-
Welner, D.H.1
Lindemose, S.2
Grossmann, J.G.3
Mollegaard, N.E.4
Olsen, A.N.5
Helgstrand, C.6
Skriver, K.7
Lo Leggio, L.8
-
40
-
-
84859071143
-
Jungbrunnen 1, a reactive oxygen species-responsive NAC transcription factor, regulates longevity in Arabidopsis
-
Wu A, Allu AD, Garapati P, et al. 2012. Jungbrunnen 1, a reactive oxygen species-responsive NAC transcription factor, regulates longevity in Arabidopsis. The Plant Cell 24, 482-506.
-
(2012)
The Plant Cell
, vol.24
, pp. 482-506
-
-
Wu, A.1
Allu, A.D.2
Garapati, P.3
-
41
-
-
0037068470
-
SINAT5 promotes ubiquitin-related degradation of NAC1 to attenuate auxin signals
-
Xie Q, Guo HS, Dallman G, Fang S, Weissman AM, Chua NH. 2002. SINAT5 promotes ubiquitin-related degradation of NAC1 to attenuate auxin signals. Nature 419, 167-170.
-
(2002)
Nature
, vol.419
, pp. 167-170
-
-
Xie, Q.1
Guo, H.S.2
Dallman, G.3
Fang, S.4
Weissman, A.M.5
Chua, N.H.6
-
42
-
-
29944441590
-
Ta NAC 69 from the NAC superfamily of transcription factors is up-regulated by abiotic stresses in wheat and recognises two consensus DNA-binding sequences
-
Xue G, Bower NI, McIntyre CL, Riding GA, Kazan K, Shorter R. 2006. Ta NAC 69 from the NAC superfamily of transcription factors is up-regulated by abiotic stresses in wheat and recognises two consensus DNA-binding sequences. Functional Plant Biology 33, 43-57.
-
(2006)
Functional Plant Biology
, vol.33
, pp. 43-57
-
-
Xue, G.1
Bower, N.I.2
McIntyre, C.L.3
Riding, G.A.4
Kazan, K.5
Shorter, R.6
-
43
-
-
68249153762
-
Turnover of fatty acids during natural senescence of Arabidopsis, Brachypodium, and switchgrass and in Arabidopsis beta-oxidation mutants
-
Yang ZL, Ohlrogge JB. 2009. Turnover of fatty acids during natural senescence of Arabidopsis, Brachypodium, and switchgrass and in Arabidopsis beta-oxidation mutants. Plant Physiology 150, 1981-1989.
-
(2009)
Plant Physiology
, vol.150
, pp. 1981-1989
-
-
Yang, Z.L.1
Ohlrogge, J.B.2
-
44
-
-
84856573260
-
An abscisic acid-AtNAP transcription factor-SAG113 protein phosphatase 2C regulatory chain for controlling dehydration in senescing Arabidopsis leaves
-
Zhang K, Gan SS. 2012. An abscisic acid-AtNAP transcription factor-SAG113 protein phosphatase 2C regulatory chain for controlling dehydration in senescing Arabidopsis leaves. Plant Physiology 158, 961-969.
-
(2012)
Plant Physiology
, vol.158
, pp. 961-969
-
-
Zhang, K.1
Gan, S.S.2
-
45
-
-
84856709588
-
An ABA-regulated and Golgi-localized protein phosphatase controls water loss during leaf senescence in Arabidopsis
-
Zhang KW, Xia XY, Zhang YY, Gan SS. 2012. An ABA-regulated and Golgi-localized protein phosphatase controls water loss during leaf senescence in Arabidopsis. The Plant Journal 69, 667-678.
-
(2012)
The Plant Journal
, vol.69
, pp. 667-678
-
-
Zhang, K.W.1
Xia, X.Y.2
Zhang, Y.Y.3
Gan, S.S.4
-
46
-
-
38649119496
-
XND1, a member of the NAC domain family in Arabidopsis thaliana, negatively regulates lignocellulose synthesis and programmed cell death in xylem
-
Zhao C, Avci U, Grant EH, Haigler CH, Beers EP. 2008. XND1, a member of the NAC domain family in Arabidopsis thaliana, negatively regulates lignocellulose synthesis and programmed cell death in xylem. The Plant Journal 53, 425-436.
-
(2008)
The Plant Journal
, vol.53
, pp. 425-436
-
-
Zhao, C.1
Avci, U.2
Grant, E.H.3
Haigler, C.H.4
Beers, E.P.5
-
47
-
-
84883721783
-
Identification and functional characterization of a rice NAC gene involved in the regulation of leaf senescence
-
Zhou Y, Huang W, Liu L, Chen T, Zhou F, Lin Y. 2013. Identification and functional characterization of a rice NAC gene involved in the regulation of leaf senescence. BMC Plant Biology 13, 132.
-
(2013)
BMC Plant Biology
, vol.13
, pp. 132
-
-
Zhou, Y.1
Huang, W.2
Liu, L.3
Chen, T.4
Zhou, F.5
Lin, Y.6
|