-
1
-
-
34247891745
-
High light inhibits chlorophyll biosynthesis at the level of 5-aminolevulinate synthesis during de-etiolation in cucumber (Cucumis sativus) cotyledons
-
Aarti, D., Tanaka, R., Ito, H., and Tanaka, A. (2007). High light inhibits chlorophyll biosynthesis at the level of 5-aminolevulinate synthesis during de-etiolation in cucumber (Cucumis sativus) cotyledons. Photochem. Photobiol. 83, 171-176.
-
(2007)
Photochem. Photobiol.
, vol.83
, pp. 171-176
-
-
Aarti, D.1
Tanaka, R.2
Ito, H.3
Tanaka, A.4
-
2
-
-
36348955545
-
A prediction of the size and evolutionary origin of the proteome of chloroplasts of Arabidopsis
-
Abdallah, F., Salamini, F., and Leister, D. (2000). A prediction of the size and evolutionary origin of the proteome of chloroplasts of Arabidopsis. Trends Plant Sci. 5, 141-142.
-
(2000)
Trends Plant Sci.
, vol.5
, pp. 141-142
-
-
Abdallah, F.1
Salamini, F.2
Leister, D.3
-
3
-
-
12844280123
-
Tobacco Mg protoporphyrin IX methyltransferase is involved in inverse activation of Mg porphyrin and protoheme synthesis
-
Alawady, A.E., and Grimm, B. (2005). Tobacco Mg protoporphyrin IX methyltransferase is involved in inverse activation of Mg porphyrin and protoheme synthesis. Plant J. 41, 282-290.
-
(2005)
Plant J.
, vol.41
, pp. 282-290
-
-
Alawady, A.E.1
Grimm, B.2
-
4
-
-
84870776667
-
LCAA, a novel factor required for magnesium protoporphyrin monomethylester cyclase accumulation and feedback control of aminolevulinic acid biosynthesis in tobacco
-
Albus, C.A., Salinas, A., Czarnecki, O., Kahlau, S., Rothbart, M., Thiele, W., Lein, W., Bock, R., Grimm, B., and Schottler, M.A. (2012). LCAA, a novel factor required for magnesium protoporphyrin monomethylester cyclase accumulation and feedback control of aminolevulinic acid biosynthesis in tobacco. Plant Physiol. 160, 1923-1939.
-
(2012)
Plant Physiol.
, vol.160
, pp. 1923-1939
-
-
Albus, C.A.1
Salinas, A.2
Czarnecki, O.3
Kahlau, S.4
Rothbart, M.5
Thiele, W.6
Lein, W.7
Bock, R.8
Grimm, B.9
Schottler, M.A.10
-
5
-
-
3242715114
-
Reactive oxygen species: Metabolism, oxidative stress, and signal transduction
-
Apel, K., and Hirt, H. (2004). Reactive oxygen species: metabolism, oxidative stress, and signal transduction. Annu. Rev. Plant Biol. 55, 373-399.
-
(2004)
Annu. Rev. Plant Biol.
, vol.55
, pp. 373-399
-
-
Apel, K.1
Hirt, H.2
-
6
-
-
20044391613
-
Chloroplasts as source and target of cellular redox regulation: A discussion on chloroplast redox signals in the context of plant physiology
-
Baier, M., and Dietz, K.J. (2005). Chloroplasts as source and target of cellular redox regulation: a discussion on chloroplast redox signals in the context of plant physiology. J. Exp. Bot. 56, 1449-1462.
-
(2005)
J. Exp. Bot.
, vol.56
, pp. 1449-1462
-
-
Baier, M.1
Dietz, K.J.2
-
7
-
-
84989315567
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Benjamini, Y., and Hochberg, Y. (1995). Controlling the false discovery rate: a practical and powerful approach to multiple testing. J. Roy. Stat. Soc. Ser. B. 6, 1580-1591.
-
(1995)
J. Roy. Stat. Soc. Ser. B.
, vol.6
, pp. 1580-1591
-
-
Benjamini, Y.1
Hochberg, Y.2
-
8
-
-
70849111821
-
Dynamic plastid redox signals integrate gene expression and metabolism to induce distinct metabolic states in photosynthetic acclimation in Arabidopsis
-
Brautigam, K., Dietzel, L., Kleine, T., Stroher, E., Wormuth, D., Dietz, K.J., Radke, D., Wirtz, M., Hell, R., Dormann, P., et al. (2009). Dynamic plastid redox signals integrate gene expression and metabolism to induce distinct metabolic states in photosynthetic acclimation in Arabidopsis. Plant Cell. 21, 2715-2732.
-
(2009)
Plant Cell.
, vol.21
, pp. 2715-2732
-
-
Brautigam, K.1
Dietzel, L.2
Kleine, T.3
Stroher, E.4
Wormuth, D.5
Dietz, K.J.6
Radke, D.7
Wirtz, M.8
Hell, R.9
Dormann, P.10
-
9
-
-
84877650633
-
Intracellular signaling from plastid to nucleus
-
Chi, W., Sun, X., and Zhang, L. (2013). Intracellular signaling from plastid to nucleus. Annu. Rev. Plant Biol. 64, 559-582.
-
(2013)
Annu. Rev. Plant Biol.
, vol.64
, pp. 559-582
-
-
Chi, W.1
Sun, X.2
Zhang, L.3
-
10
-
-
0038338448
-
Green or red: What stops the traffic in the tetrapyrrole pathway?
-
Cornah, J.E., Terry, M.J., and Smith, A.G. (2003). Green or red: what stops the traffic in the tetrapyrrole pathway? Trends Plant Sci. 8, 224-230.
-
(2003)
Trends Plant Sci.
, vol.8
, pp. 224-230
-
-
Cornah, J.E.1
Terry, M.J.2
Smith, A.G.3
-
11
-
-
84857983500
-
Post-translational control of tetrapyrrole biosynthesis in plants, algae, and cyanobacteria
-
Czarnecki, O., and Grimm, B. (2012). Post-translational control of tetrapyrrole biosynthesis in plants, algae, and cyanobacteria. J. Exp. Bot. 63, 1675-1687.
-
(2012)
J. Exp. Bot.
, vol.63
, pp. 1675-1687
-
-
Czarnecki, O.1
Grimm, B.2
-
12
-
-
84897462266
-
Evidence for a contribution of ALA synthesis to plastidto-nucleus signaling
-
Czarnecki, O., Glasser, C., Chen, J.G., Mayer, K.F., and Grimm, B. (2012). Evidence for a contribution of ALA synthesis to plastidto-nucleus signaling. Frontiers in Plant Science. 3, 236.
-
(2012)
Frontiers in Plant Science.
, vol.3
, pp. 236
-
-
Czarnecki, O.1
Glasser, C.2
Chen, J.G.3
Mayer, K.F.4
Grimm, B.5
-
13
-
-
60849139395
-
GOrilla: A tool for discovery and visualization of enriched GO terms in ranked gene lists
-
Eden, E., Navon, R., Steinfeld, I., Lipson, D., and Yakhini, Z. (2009). GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists. BMC Bioinformatics. 10, 48.
-
(2009)
BMC Bioinformatics.
, vol.10
, pp. 48
-
-
Eden, E.1
Navon, R.2
Steinfeld, I.3
Lipson, D.4
Yakhini, Z.5
-
14
-
-
84878221380
-
Reconsidering the nature and mode of action of metabolite retrograde signals from the chloroplast
-
Estavillo, G.M., Chan, K.X., Phua, S.Y., and Pogson, B.J. (2012). Reconsidering the nature and mode of action of metabolite retrograde signals from the chloroplast. Frontiers in Plant Science. 3, 300.
-
(2012)
Frontiers in Plant Science.
, vol.3
, pp. 300
-
-
Estavillo, G.M.1
Chan, K.X.2
Phua, S.Y.3
Pogson, B.J.4
-
15
-
-
84855182059
-
Evidence for a SAL1-PAP chloroplast retrograde pathway that functions in drought and high light signaling in Arabidopsis
-
Estavillo, G.M., Crisp, P.A., Pornsiriwong, W., Wirtz, M., Collinge, D., Carrie, C., Giraud, E., Whelan, J., David, P., Javot, H., et al. (2011). Evidence for a SAL1-PAP chloroplast retrograde pathway that functions in drought and high light signaling in Arabidopsis. Plant Cell. 23, 3992-4012.
-
(2011)
Plant Cell.
, vol.23
, pp. 3992-4012
-
-
Estavillo, G.M.1
Crisp, P.A.2
Pornsiriwong, W.3
Wirtz, M.4
Collinge, D.5
Carrie, C.6
Giraud, E.7
Whelan, J.8
David, P.9
Javot, H.10
-
16
-
-
77952072789
-
The role of reactive oxygen species in signalling from chloroplasts to the nucleus
-
Galvez-Valdivieso, G., and Mullineaux, P.M. (2010). The role of reactive oxygen species in signalling from chloroplasts to the nucleus. Physiol Plant. 138, 430-439.
-
(2010)
Physiol Plant.
, vol.138
, pp. 430-439
-
-
Galvez-Valdivieso, G.1
Mullineaux, P.M.2
-
17
-
-
28744458859
-
Bioconductor: Open software development for computational biology and bioinformatics
-
Gentleman, R.C., Carey, V.J., Bates, D.M., Bolstad, B., Dettling, M., Dudoit, S., Ellis, B., Gautier, L., Ge, Y., Gentry, J., et al. (2004). Bioconductor: open software development for computational biology and bioinformatics. Genome Biol. 5, R80.
-
(2004)
Genome Biol.
, vol.5
-
-
Gentleman, R.C.1
Carey, V.J.2
Bates, D.M.3
Bolstad, B.4
Dettling, M.5
Dudoit, S.6
Ellis, B.7
Gautier, L.8
Ge, Y.9
Gentry, J.10
-
18
-
-
0037471675
-
Coordination of plastid and nuclear gene expression
-
discussion 144-135
-
Gray, J.C., Sullivan, J.A., Wang, J.H., Jerome, C.A., and MacLean, D. (2003). Coordination of plastid and nuclear gene expression. Philos. Trans. R Soc. Lond. B Biol. Sci. 358, 135-144; discussion 144-135.
-
(2003)
Philos. Trans. R Soc. Lond. B Biol. Sci.
, vol.358
, pp. 135-144
-
-
Gray, J.C.1
Sullivan, J.A.2
Wang, J.H.3
Jerome, C.A.4
MacLean, D.5
-
19
-
-
58749109023
-
Genevestigator v3: A reference expression database for the meta-analysis of transcriptomes
-
Hruz, T., Laule, O., Szabo, G., Wessendorp, F., Bleuler, S., Oertle, L., Widmayer, P., Gruissem, W., and Zimmermann, P. (2008). Genevestigator v3: a reference expression database for the meta-analysis of transcriptomes. Advances in Bioinformatics. 2008, 420747.
-
(2008)
Advances in Bioinformatics.
, vol.2008
, pp. 420747
-
-
Hruz, T.1
Laule, O.2
Szabo, G.3
Wessendorp, F.4
Bleuler, S.5
Oertle, L.6
Widmayer, P.7
Gruissem, W.8
Zimmermann, P.9
-
20
-
-
80052411081
-
In vivo analyses of the roles of essential Omp85-related proteins in the chloroplast outer envelope membrane
-
Huang, W., Ling, Q., Bedard, J., Lilley, K., and Jarvis, P. (2011). In vivo analyses of the roles of essential Omp85-related proteins in the chloroplast outer envelope membrane. Plant Physiol. 157, 147-159.
-
(2011)
Plant Physiol.
, vol.157
, pp. 147-159
-
-
Huang, W.1
Ling, Q.2
Bedard, J.3
Lilley, K.4
Jarvis, P.5
-
21
-
-
0142121516
-
Exploration, normalization, and summaries of high density oligonucleotide array probe level data
-
Irizarry, R.A., Hobbs, B., Collin, F., Beazer-Barclay, Y.D., Antonellis, K.J., Scherf, U., and Speed, T.P. (2003). Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics. 4, 249-264.
-
(2003)
Biostatistics.
, vol.4
, pp. 249-264
-
-
Irizarry, R.A.1
Hobbs, B.2
Collin, F.3
Beazer-Barclay, Y.D.4
Antonellis, K.J.5
Scherf, U.6
Speed, T.P.7
-
22
-
-
71249083138
-
Chloroplast proteomics and the compartmentation of plastidial isoprenoid biosynthetic pathways
-
Joyard, J., Ferro, M., Masselon, C., Seigneurin-Berny, D., Salvi, D., Garin, J., and Rolland, N. (2009). Chloroplast proteomics and the compartmentation of plastidial isoprenoid biosynthetic pathways. Mol. Plant. 2, 1154-1180.
-
(2009)
Mol. Plant.
, vol.2
, pp. 1154-1180
-
-
Joyard, J.1
Ferro, M.2
Masselon, C.3
Seigneurin-Berny, D.4
Salvi, D.5
Garin, J.6
Rolland, N.7
-
23
-
-
84887453828
-
Singlet oxygen-mediated signaling in plants: Moving from flu to wild type reveals an increasing complexity
-
Kim, C., and Apel, K. (2013). Singlet oxygen-mediated signaling in plants: moving from flu to wild type reveals an increasing complexity. Photosynth. Res. 116, 455-464.
-
(2013)
Photosynth. Res.
, vol.116
, pp. 455-464
-
-
Kim, C.1
Apel, K.2
-
24
-
-
43049112810
-
No single way to understand singlet oxygen signalling in plants
-
Kim, C., Meskauskiene, R., Apel, K., and Laloi, C. (2008). No single way to understand singlet oxygen signalling in plants. EMBO Rep. 9, 435-439.
-
(2008)
EMBO Rep.
, vol.9
, pp. 435-439
-
-
Kim, C.1
Meskauskiene, R.2
Apel, K.3
Laloi, C.4
-
25
-
-
84893039772
-
Arabidopsis chlorophyll biosynthesis: An essential balance between the methylerythritol phosphate and tetrapyrrole pathways
-
Kim, S., Schlicke, H., Van Ree, K., Karvonen, K., Subramaniam, A., Richter, A., Grimm, B., and Braam, J. (2013). Arabidopsis chlorophyll biosynthesis: an essential balance between the methylerythritol phosphate and tetrapyrrole pathways. Plant Cell. 25, 4984-4993.
-
(2013)
Plant Cell.
, vol.25
, pp. 4984-4993
-
-
Kim, S.1
Schlicke, H.2
Van Ree, K.3
Karvonen, K.4
Subramaniam, A.5
Richter, A.6
Grimm, B.7
Braam, J.8
-
26
-
-
84866378808
-
Interplay between Heat Shock Protein 90 and HY5 controls PhANG expression in response to the GUN5 plastid signal
-
Kindgren, P., Noren, L., Lopez Jde, D., Shaikhali, J., and Strand, A. (2012). Interplay between Heat Shock Protein 90 and HY5 controls PhANG expression in response to the GUN5 plastid signal. Mol. Plant. 5, 901-913.
-
(2012)
Mol. Plant.
, vol.5
, pp. 901-913
-
-
Kindgren, P.1
Noren, L.2
Lopez Jde, D.3
Shaikhali, J.4
Strand, A.5
-
27
-
-
0034538403
-
Chloroplast signalling in the light induction of nuclear HSP70 genes requires the accumulation of chlorophyll precursors and their accessibility to cytoplasm/nucleus
-
Kropat, J., Oster, U., Rudiger, W., and Beck, C.F. (2000). Chloroplast signalling in the light induction of nuclear HSP70 genes requires the accumulation of chlorophyll precursors and their accessibility to cytoplasm/nucleus. Plant J. 24, 523-531.
-
(2000)
Plant J.
, vol.24
, pp. 523-531
-
-
Kropat, J.1
Oster, U.2
Rudiger, W.3
Beck, C.F.4
-
28
-
-
33846331967
-
Cross-talk between singlet oxygen- and hydrogen peroxide-dependent signaling of stress responses in Arabidopsis thaliana
-
Laloi, C., Stachowiak, M., Pers-Kamczyc, E., Warzych, E., Murgia, I., and Apel, K. (2007). Cross-talk between singlet oxygen- and hydrogen peroxide-dependent signaling of stress responses in Arabidopsis thaliana. Proc. Natl Acad. Sci. U S A. 104, 672-677.
-
(2007)
Proc. Natl Acad. Sci. U S A.
, vol.104
, pp. 672-677
-
-
Laloi, C.1
Stachowiak, M.2
Pers-Kamczyc, E.3
Warzych, E.4
Murgia, I.5
Apel, K.6
-
29
-
-
0347298576
-
GUN4, a regulator of chlorophyll synthesis and intracellular signaling
-
Larkin, R.M., Alonso, J.M., Ecker, J.R., and Chory, J. (2003). GUN4, a regulator of chlorophyll synthesis and intracellular signaling. Science. 299, 902-906.
-
(2003)
Science.
, vol.299
, pp. 902-906
-
-
Larkin, R.M.1
Alonso, J.M.2
Ecker, J.R.3
Chory, J.4
-
30
-
-
27744526687
-
Origin, evolution and genetic effects of nuclear insertions of organelle DNA
-
Leister, D. (2005). Origin, evolution and genetic effects of nuclear insertions of organelle DNA. Trends Genet. 21, 655-663.
-
(2005)
Trends Genet.
, vol.21
, pp. 655-663
-
-
Leister, D.1
-
31
-
-
33750570248
-
Reduced activity of plastid protoporphyrinogen oxidase causes attenuated photodynamic damage during high-light compared to low-light exposure
-
Lermontova, I., and Grimm, B. (2006). Reduced activity of plastid protoporphyrinogen oxidase causes attenuated photodynamic damage during high-light compared to low-light exposure. Plant J. 48, 499-510.
-
(2006)
Plant J.
, vol.48
, pp. 499-510
-
-
Lermontova, I.1
Grimm, B.2
-
32
-
-
0035710746
-
Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method
-
Livak, K.J., and Schmittgen, T.D. (2001). Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. Methods. 25, 402-408.
-
(2001)
Methods.
, vol.25
, pp. 402-408
-
-
Livak, K.J.1
Schmittgen, T.D.2
-
33
-
-
0037126071
-
Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus
-
Martin, W., Rujan, T., Richly, E., Hansen, A., Cornelsen, S., Lins, T., Leister, D., Stoebe, B., Hasegawa, M., and Penny, D. (2002). Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus. Proc. Natl Acad. Sci. U S A. 99, 12246-12251.
-
(2002)
Proc. Natl Acad. Sci. U S A.
, vol.99
, pp. 12246-12251
-
-
Martin, W.1
Rujan, T.2
Richly, E.3
Hansen, A.4
Cornelsen, S.5
Lins, T.6
Leister, D.7
Stoebe, B.8
Hasegawa, M.9
Penny, D.10
-
34
-
-
78651057641
-
The occurrence and determination of delta-amino-levulinic acid and porphobilinogen in urine
-
Mauzerall, D., and Granick, S. (1956). The occurrence and determination of delta-amino-levulinic acid and porphobilinogen in urine. J. Biol. Chem. 219, 435-446.
-
(1956)
J. Biol. Chem.
, vol.219
, pp. 435-446
-
-
Mauzerall, D.1
Granick, S.2
-
35
-
-
10344255673
-
The nuclear genes Lhcb and HEMA1 are differentially sensitive to plastid signals and suggest distinct roles for the GUN1 and GUN5 plastid-signalling pathways during de-etiolation
-
McCormac, A.C., and Terry, M.J. (2004). The nuclear genes Lhcb and HEMA1 are differentially sensitive to plastid signals and suggest distinct roles for the GUN1 and GUN5 plastid-signalling pathways during de-etiolation. Plant J. 40, 672-685.
-
(2004)
Plant J.
, vol.40
, pp. 672-685
-
-
McCormac, A.C.1
Terry, M.J.2
-
36
-
-
0035940502
-
FLU: A negative regulator of chlorophyll biosynthesis in Arabidopsis thaliana
-
Meskauskiene, R., Nater, M., Goslings, D., Kessler, F., op den Camp, R., and Apel, K. (2001). FLU: a negative regulator of chlorophyll biosynthesis in Arabidopsis thaliana. Proc. Natl Acad. Sci. U S A. 98, 12826-12831.
-
(2001)
Proc. Natl Acad. Sci. U S A.
, vol.98
, pp. 12826-12831
-
-
Meskauskiene, R.1
Nater, M.2
Goslings, D.3
Kessler, F.4
Op Den-Camp, R.5
Apel, K.6
-
37
-
-
0035852789
-
Arabidopsis genomes uncoupled 5 (GUN5) mutant reveals the involvement of Mg-chelatase H subunit in plastidto-nucleus signal transduction
-
Mochizuki, N., Brusslan, J.A., Larkin, R., Nagatani, A., and Chory, J. (2001). Arabidopsis genomes uncoupled 5 (GUN5) mutant reveals the involvement of Mg-chelatase H subunit in plastidto-nucleus signal transduction. Proc. Natl Acad. Sci. U S A. 98, 2053-2058.
-
(2001)
Proc. Natl Acad. Sci. U S A.
, vol.98
, pp. 2053-2058
-
-
Mochizuki, N.1
Brusslan, J.A.2
Larkin, R.3
Nagatani, A.4
Chory, J.5
-
38
-
-
77956480458
-
The cell biology of tetrapyrroles: A life and death struggle
-
Mochizuki, N., Tanaka, R., Grimm, B., Masuda, T., Moulin, M., Smith, A.G., Tanaka, A., and Terry, M.J. (2010). The cell biology of tetrapyrroles: a life and death struggle. Trends Plant Sci. 15, 488-498.
-
(2010)
Trends Plant Sci.
, vol.15
, pp. 488-498
-
-
Mochizuki, N.1
Tanaka, R.2
Grimm, B.3
Masuda, T.4
Moulin, M.5
Smith, A.G.6
Tanaka, A.7
Terry, M.J.8
-
39
-
-
54449086394
-
The steady-state level of Mg-protoporphyrin IX is not a determinant of plastid-to-nucleus signaling in Arabidopsis
-
Mochizuki, N., Tanaka, R., Tanaka, A., Masuda, T., and Nagatani, A. (2008). The steady-state level of Mg-protoporphyrin IX is not a determinant of plastid-to-nucleus signaling in Arabidopsis. Proc. Natl Acad. Sci. U S A. 105, 15184-15189.
-
(2008)
Proc. Natl Acad. Sci. U S A.
, vol.105
, pp. 15184-15189
-
-
Mochizuki, N.1
Tanaka, R.2
Tanaka, A.3
Masuda, T.4
Nagatani, A.5
-
40
-
-
33644871375
-
Transactivated and chemically inducible gene expression in plants
-
Moore, I., Samalova, M., and Kurup, S. (2006). Transactivated and chemically inducible gene expression in plants. Plant J. 45, 651-683.
-
(2006)
Plant J.
, vol.45
, pp. 651-683
-
-
Moore, I.1
Samalova, M.2
Kurup, S.3
-
41
-
-
54449096156
-
Tetrapyrrole profiling in Arabidopsis seedlings reveals that retrograde plastid nuclear signaling is not due to Mg-protoporphyrin IX accumulation
-
Moulin, M., McCormac, A.C., Terry, M.J., and Smith, A.G. (2008). Tetrapyrrole profiling in Arabidopsis seedlings reveals that retrograde plastid nuclear signaling is not due to Mg-protoporphyrin IX accumulation. Proc. Natl Acad. Sci. U S A. 105, 15178-15183.
-
(2008)
Proc. Natl Acad. Sci. U S A.
, vol.105
, pp. 15178-15183
-
-
Moulin, M.1
McCormac, A.C.2
Terry, M.J.3
Smith, A.G.4
-
42
-
-
0034730980
-
Are diverse signalling pathways integrated in the regulation of Arabidopsis antioxidant defence gene expression in response to excess excitation energy? Philos
-
Mullineaux, P., Ball, L., Escobar, C., Karpinska, B., Creissen, G., and Karpinski, S. (2000). Are diverse signalling pathways integrated in the regulation of Arabidopsis antioxidant defence gene expression in response to excess excitation energy? Philos. Trans. R Soc. Lond. B Biol. Sci. 355, 1531-1540.
-
(2000)
Trans. R Soc. Lond. B Biol. Sci.
, vol.355
, pp. 1531-1540
-
-
Mullineaux, P.1
Ball, L.2
Escobar, C.3
Karpinska, B.4
Creissen, G.5
Karpinski, S.6
-
43
-
-
34250612253
-
Induction of isoforms of tetrapyrrole biosynthetic enzymes, AtHEMA2 and AtFC1, under stress conditions and their physiological functions in Arabidopsis
-
Nagai, S., Koide, M., Takahashi, S., Kikuta, A., Aono, M., Sasaki-Sekimoto, Y., Ohta, H., Takamiya, K., and Masuda, T. (2007). Induction of isoforms of tetrapyrrole biosynthetic enzymes, AtHEMA2 and AtFC1, under stress conditions and their physiological functions in Arabidopsis. Plant Physiol. 144, 1039-1051.
-
(2007)
Plant Physiol.
, vol.144
, pp. 1039-1051
-
-
Nagai, S.1
Koide, M.2
Takahashi, S.3
Kikuta, A.4
Aono, M.5
Sasaki-Sekimoto, Y.6
Ohta, H.7
Takamiya, K.8
Masuda, T.9
-
44
-
-
33745943403
-
Plastidto-nucleus retrograde signaling
-
Nott, A., Jung, H.S., Koussevitzky, S., and Chory, J. (2006). Plastidto-nucleus retrograde signaling. Annu. Rev. Plant Biol. 57, 739-759.
-
(2006)
Annu. Rev. Plant Biol.
, vol.57
, pp. 739-759
-
-
Nott, A.1
Jung, H.S.2
Koussevitzky, S.3
Chory, J.4
-
45
-
-
0001630788
-
Photooxidative destruction of chloroplasts and its consequences for expression of nuclear genes
-
Oelmuller, R., and Mohr, H. (1986). Photooxidative destruction of chloroplasts and its consequences for expression of nuclear genes. Planta. 167, 106-113.
-
(1986)
Planta.
, vol.167
, pp. 106-113
-
-
Oelmuller, R.1
Mohr, H.2
-
46
-
-
10744230800
-
Rapid induction of distinct stress responses after the release of singlet oxygen in Arabidopsis
-
op den Camp, R.G., Przybyla, D., Ochsenbein, C., Laloi, C., Kim, C., Danon, A., Wagner, D., Hideg, E., Gobel, C., Feussner, I., et al. (2003). Rapid induction of distinct stress responses after the release of singlet oxygen in Arabidopsis. Plant Cell. 15, 2320-2332.
-
(2003)
Plant Cell.
, vol.15
, pp. 2320-2332
-
-
Op Den-Camp, R.G.1
Przybyla, D.2
Ochsenbein, C.3
Laloi, C.4
Kim, C.5
Danon, A.6
Wagner, D.7
Hideg, E.8
Gobel, C.9
Feussner, I.10
-
47
-
-
0034794448
-
Regulatory network of tetrapyrrole biosynthesis-studies of intracellular signalling involved in metabolic and developmental control of plastids
-
Papenbrock, J., and Grimm, B. (2001). Regulatory network of tetrapyrrole biosynthesis-studies of intracellular signalling involved in metabolic and developmental control of plastids. Planta. 213, 667-681.
-
(2001)
Planta.
, vol.213
, pp. 667-681
-
-
Papenbrock, J.1
Grimm, B.2
-
48
-
-
0034003620
-
Role of magnesium chelatase activity in the early steps of the tetrapyrrole biosynthetic pathway
-
Papenbrock, J., Mock, H.P., Tanaka, R., Kruse, E., and Grimm, B. (2000). Role of magnesium chelatase activity in the early steps of the tetrapyrrole biosynthetic pathway. Plant Physiol. 122, 1161-1169.
-
(2000)
Plant Physiol.
, vol.122
, pp. 1161-1169
-
-
Papenbrock, J.1
Mock, H.P.2
Tanaka, R.3
Kruse, E.4
Grimm, B.5
-
49
-
-
35649023736
-
Interorganellar communication
-
Pesaresi, P., Schneider, A., Kleine, T., and Leister, D. (2007). Interorganellar communication. Curr. Opin. Plant Biol. 10, 600-606.
-
(2007)
Curr. Opin. Plant Biol.
, vol.10
, pp. 600-606
-
-
Pesaresi, P.1
Schneider, A.2
Kleine, T.3
Leister, D.4
-
50
-
-
71249090484
-
GUN4 is required for posttranslational control of plant tetrapyrrole biosynthesis
-
Peter, E., and Grimm, B. (2009). GUN4 is required for posttranslational control of plant tetrapyrrole biosynthesis. Mol. Plant. 2, 1198-1210.
-
(2009)
Mol. Plant.
, vol.2
, pp. 1198-1210
-
-
Peter, E.1
Grimm, B.2
-
51
-
-
59849114999
-
Potential regulation of gene expression in photosynthetic cells by redox and energy state: Approaches towards better understanding
-
Pfannschmidt, T., Brautigam, K., Wagner, R., Dietzel, L., Schroter, Y., Steiner, S., and Nykytenko, A. (2009). Potential regulation of gene expression in photosynthetic cells by redox and energy state: approaches towards better understanding. Ann. Bot. 103, 599-607.
-
(2009)
Ann. Bot.
, vol.103
, pp. 599-607
-
-
Pfannschmidt, T.1
Brautigam, K.2
Wagner, R.3
Dietzel, L.4
Schroter, Y.5
Steiner, S.6
Nykytenko, A.7
-
52
-
-
54549083103
-
Plastid signalling to the nucleus and beyond
-
Pogson, B.J., Woo, N.S., Forster, B., and Small, I.D. (2008). Plastid signalling to the nucleus and beyond. Trends Plant Sci. 13, 602-609.
-
(2008)
Trends Plant Sci.
, vol.13
, pp. 602-609
-
-
Pogson, B.J.1
Woo, N.S.2
Forster, B.3
Small, I.D.4
-
53
-
-
34047248059
-
Knock-out of the magnesium protoporphyrin IX methyltransferase gene in Arabidopsis: Effects on chloroplast development and on chloroplast-to-nucleus signaling
-
Pontier, D., Albrieux, C., Joyard, J., Lagrange, T., and Block, M.A. (2007). Knock-out of the magnesium protoporphyrin IX methyltransferase gene in Arabidopsis: effects on chloroplast development and on chloroplast-to-nucleus signaling. J. Biol. Chem. 282, 2297-2304.
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 2297-2304
-
-
Pontier, D.1
Albrieux, C.2
Joyard, J.3
Lagrange, T.4
Block, M.A.5
-
54
-
-
0028090388
-
Purification and partial characterisation of barley glutamyl-tRNA(Glu) reductase, the enzyme that directs glutamate to chlorophyll biosynthesis
-
Pontoppidan, B., and Kannangara, C.G. (1994). Purification and partial characterisation of barley glutamyl-tRNA(Glu) reductase, the enzyme that directs glutamate to chlorophyll biosynthesis. Eur. J. Biochem. 225, 529-537.
-
(1994)
Eur. J. Biochem.
, vol.225
, pp. 529-537
-
-
Pontoppidan, B.1
Kannangara, C.G.2
-
55
-
-
77956568987
-
Functional analysis of the pathways for 2-Cys peroxiredoxin reduction in Arabidopsis thaliana chloroplasts
-
Pulido, P., Spinola, M.C., Kirchsteiger, K., Guinea, M., Pascual, M.B., Sahrawy, M., Sandalio, L.M., Dietz, K.J., Gonzalez, M., and Cejudo, F.J. (2010). Functional analysis of the pathways for 2-Cys peroxiredoxin reduction in Arabidopsis thaliana chloroplasts. J. Exp. Bot. 61, 4043-4054.
-
(2010)
J. Exp. Bot.
, vol.61
, pp. 4043-4054
-
-
Pulido, P.1
Spinola, M.C.2
Kirchsteiger, K.3
Guinea, M.4
Pascual, M.B.5
Sahrawy, M.6
Sandalio, L.M.7
Dietz, K.J.8
Gonzalez, M.9
Cejudo, F.J.10
-
56
-
-
84859478173
-
Carotenoid oxidation products are stress signals that mediate gene responses to singlet oxygen in plants
-
Ramel, F., Birtic, S., Ginies, C., Soubigou-Taconnat, L., Triantaphylides, C., and Havaux, M. (2012). Carotenoid oxidation products are stress signals that mediate gene responses to singlet oxygen in plants. Proc. Natl Acad. Sci. U S A. 109, 5535-5540.
-
(2012)
Proc. Natl Acad. Sci. U S A.
, vol.109
, pp. 5535-5540
-
-
Ramel, F.1
Birtic, S.2
Ginies, C.3
Soubigou-Taconnat, L.4
Triantaphylides, C.5
Havaux, M.6
-
57
-
-
84877013349
-
Posttranslational influence of NADPH-dependent thioredoxin reductase C on enzymes in tetrapyrrole synthesis
-
Richter, A.S., Peter, E., Rothbart, M., Schlicke, H., Toivola, J., Rintamaki, E., and Grimm, B. (2013). Posttranslational influence of NADPH-dependent thioredoxin reductase C on enzymes in tetrapyrrole synthesis. Plant Physiol. 162, 63-73.
-
(2013)
Plant Physiol.
, vol.162
, pp. 63-73
-
-
Richter, A.S.1
Peter, E.2
Rothbart, M.3
Schlicke, H.4
Toivola, J.5
Rintamaki, E.6
Grimm, B.7
-
58
-
-
1642564552
-
The zinc finger protein Zat12 is required for cytosolic ascorbate peroxidase 1 expression during oxidative stress in Arabidopsis
-
Rizhsky, L., Davletova, S., Liang, H., and Mittler, R. (2004). The zinc finger protein Zat12 is required for cytosolic ascorbate peroxidase 1 expression during oxidative stress in Arabidopsis. J. Biol. Chem. 279, 11736-11743.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 11736-11743
-
-
Rizhsky, L.1
Davletova, S.2
Liang, H.3
Mittler, R.4
-
59
-
-
0035209480
-
Pathways of plastid-to-nucleus signaling
-
Rodermel, S. (2001). Pathways of plastid-to-nucleus signaling. Trends Plant Sci. 6, 471-478.
-
(2001)
Trends Plant Sci.
, vol.6
, pp. 471-478
-
-
Rodermel, S.1
-
60
-
-
39149120554
-
Plastid signals remodel light signaling networks and are essential for efficient chloroplast biogenesis in Arabidopsis
-
Ruckle, M.E., De Marco, S.M., and Larkin, R.M. (2007). Plastid signals remodel light signaling networks and are essential for efficient chloroplast biogenesis in Arabidopsis. Plant Cell. 19, 3944-3960.
-
(2007)
Plant Cell.
, vol.19
, pp. 3944-3960
-
-
Ruckle, M.E.1
De Marco, S.M.2
Larkin, R.M.3
-
61
-
-
84921593576
-
Functional characterization of the two ferrochelatases in Arabidopsis thaliana
-
doi:10.1111/pce.12248
-
Scharfenberg, M., Mittermayr, L., von Roepenack-Lahaye, E., Schlicke, H., Grimm, B., Leister, D., and Kleine, T. (2013). Functional characterization of the two ferrochelatases in Arabidopsis thaliana. Plant Cell Environ. doi:10.1111/pce.12248.
-
(2013)
Plant Cell Environ.
-
-
Scharfenberg, M.1
Mittermayr, L.2
Von Roepenack-Lahaye, E.3
Schlicke, H.4
Grimm, B.5
Leister, D.6
Kleine, T.7
-
62
-
-
4544341015
-
Linear models and empirical bayes methods for assessing differential expression in microarray experiments
-
Smyth, G.K. (2004). Linear models and empirical bayes methods for assessing differential expression in microarray experiments. Statistical Applications in Genetics and Molecular Biology. 3, Article3.
-
(2004)
Statistical Applications in Genetics and Molecular Biology.
, vol.3
-
-
Smyth, G.K.1
-
63
-
-
24744463539
-
The Chlamydomonas reinhardtii gtr gene encoding the tetrapyrrole biosynthetic enzyme glutamyltRNA reductase: Structure of the gene and properties of the expressed enzyme
-
Srivastava, A., Lake, V., Nogaj, L.A., Mayer, S.M., Willows, R.D., and Beale, S.I. (2005). The Chlamydomonas reinhardtii gtr gene encoding the tetrapyrrole biosynthetic enzyme glutamyltRNA reductase: structure of the gene and properties of the expressed enzyme. Plant Mol. Biol. 58, 643-658.
-
(2005)
Plant Mol. Biol.
, vol.58
, pp. 643-658
-
-
Srivastava, A.1
Lake, V.2
Nogaj, L.A.3
Mayer, S.M.4
Willows, R.D.5
Beale, S.I.6
-
64
-
-
0347927268
-
Chloroplast to nucleus communication triggered by accumulation of Mg-protoporphyrin IX
-
Strand, A., Asami, T., Alonso, J., Ecker, J.R., and Chory, J. (2003). Chloroplast to nucleus communication triggered by accumulation of Mg-protoporphyrin IX. Nature. 421, 79-83.
-
(2003)
Nature.
, vol.421
, pp. 79-83
-
-
Strand, A.1
Asami, T.2
Alonso, J.3
Ecker, J.R.4
Chory, J.5
-
65
-
-
0027214202
-
Signal transduction mutants of Arabidopsis uncouple nuclear CAB and RBCS gene expression from chloroplast development
-
Susek, R.E., Ausubel, F.M., and Chory, J. (1993). Signal transduction mutants of Arabidopsis uncouple nuclear CAB and RBCS gene expression from chloroplast development. Cell. 74, 787-799.
-
(1993)
Cell.
, vol.74
, pp. 787-799
-
-
Susek, R.E.1
Ausubel, F.M.2
Chory, J.3
-
66
-
-
84885151876
-
A model for tetrapyrrole synthesis as the primary mechanism for plastid-to-nucleus signaling during chloroplast biogenesis
-
Terry, M.J., and Smith, A.G. (2013). A model for tetrapyrrole synthesis as the primary mechanism for plastid-to-nucleus signaling during chloroplast biogenesis. Frontiers in Plant Science. 4, 14.
-
(2013)
Frontiers in Plant Science.
, vol.4
, pp. 14
-
-
Terry, M.J.1
Smith, A.G.2
-
67
-
-
77952018854
-
In-depth analysis of the distinctive effects of norflurazon implies that tetrapyrrole biosynthesis, organellar gene expression and ABA cooperate in the GUN-type of plastid signalling
-
Voigt, C., Oster, U., Bornke, F., Jahns, P., Dietz, K.J., Leister, D., and Kleine, T. (2010). In-depth analysis of the distinctive effects of norflurazon implies that tetrapyrrole biosynthesis, organellar gene expression and ABA cooperate in the GUN-type of plastid signalling. Physiol. Plant. 138, 503-519.
-
(2010)
Physiol. Plant.
, vol.138
, pp. 503-519
-
-
Voigt, C.1
Oster, U.2
Bornke, F.3
Jahns, P.4
Dietz, K.J.5
Leister, D.6
Kleine, T.7
-
68
-
-
48249108808
-
Heme, a plastid-derived regulator of nuclear gene expression in Chlamydomonas
-
von Gromoff, E.D., Alawady, A., Meinecke, L., Grimm, B., and Beck, C.F. (2008). Heme, a plastid-derived regulator of nuclear gene expression in Chlamydomonas. Plant Cell. 20, 552-567.
-
(2008)
Plant Cell.
, vol.20
, pp. 552-567
-
-
Von Gromoff, E.D.1
Alawady, A.2
Meinecke, L.3
Grimm, B.4
Beck, C.F.5
-
69
-
-
26944496676
-
A high-throughput inducible RNAi vector for plants
-
Wielopolska, A., Townley, H., Moore, I., Waterhouse, P., and Helliwell, C. (2005). A high-throughput inducible RNAi vector for plants. Plant Biotechnol. J. 3, 583-590.
-
(2005)
Plant Biotechnol. J.
, vol.3
, pp. 583-590
-
-
Wielopolska, A.1
Townley, H.2
Moore, I.3
Waterhouse, P.4
Helliwell, C.5
-
70
-
-
84866153139
-
Organelle signaling: How stressed chloroplasts communicate with the nucleus
-
Woodson, J.D., and Chory, J. (2012). Organelle signaling: how stressed chloroplasts communicate with the nucleus. Curr. Biol. 22, R690-R692.
-
(2012)
Curr. Biol.
, vol.22
-
-
Woodson, J.D.1
Chory, J.2
-
71
-
-
79957526624
-
Heme synthesis by plastid ferrochelatase I regulates nuclear gene expression in plants
-
Woodson, J.D., Perez-Ruiz, J.M., and Chory, J. (2011). Heme synthesis by plastid ferrochelatase I regulates nuclear gene expression in plants. Curr. Biol. 21, 897-903.
-
(2011)
Curr. Biol.
, vol.21
, pp. 897-903
-
-
Woodson, J.D.1
Perez-Ruiz, J.M.2
Chory, J.3
-
72
-
-
84862700839
-
Retrograde signaling by the plastidial metabolite MEcPP regulates expression of nuclear stressresponse genes
-
Xiao, Y., Savchenko, T., Baidoo, E.E., Chehab, W.E., Hayden, D.M., Tolstikov, V., Corwin, J.A., Kliebenstein, D.J., Keasling, J.D., and Dehesh, K. (2012). Retrograde signaling by the plastidial metabolite MEcPP regulates expression of nuclear stressresponse genes. Cell. 149, 1525-1535.
-
(2012)
Cell.
, vol.149
, pp. 1525-1535
-
-
Xiao, Y.1
Savchenko, T.2
Baidoo, E.E.3
Chehab, W.E.4
Hayden, D.M.5
Tolstikov, V.6
Corwin, J.A.7
Kliebenstein, D.J.8
Keasling, J.D.9
Dehesh, K.10
|