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Volumn 111, Issue 27, 2014, Pages 9733-9738

Fluid flows created by swimming bacteria drive self-organization in confined suspensions

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BACILLUS SUBTILIS; BACTERIAL CELL; BACTERIUM; BOUNDARY LAYER; CELL STRUCTURE; FLAGELLUM; FLUID FLOW; HYDRODYNAMICS; NONHUMAN; PRIORITY JOURNAL; SUSPENSION; SWIMMING; THEORETICAL STUDY;

EID: 84903977455     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1405698111     Document Type: Article
Times cited : (412)

References (48)
  • 1
    • 79551568949 scopus 로고    scopus 로고
    • The mechanics and statistics of active matter
    • Ramaswamy S (2010) The mechanics and statistics of active matter. Annu Rev Condens Matter Phys 1:323-345.
    • (2010) Annu Rev Condens Matter Phys , vol.1 , pp. 323-345
    • Ramaswamy, S.1
  • 2
    • 84882267463 scopus 로고    scopus 로고
    • Hydrodynamics of soft active matter
    • Marchetti MC, et al. (2013) Hydrodynamics of soft active matter. Rev Mod Phys 85(3):1143-1189.
    • (2013) Rev Mod Phys , vol.85 , Issue.3 , pp. 1143-1189
    • Marchetti, M.C.1
  • 3
    • 1642632601 scopus 로고    scopus 로고
    • Asters, vortices, and rotating spirals in active gels of polar filaments
    • Kruse K, Joanny J-F, Jülicher F, Prost J, Sekimoto K (2004) Asters, vortices, and rotating spirals in active gels of polar filaments. Phys Rev Lett 92(7):078101.
    • (2004) Phys Rev Lett , vol.92 , Issue.7 , pp. 078101
    • Kruse, K.1    Joanny, J.-F.2    Jülicher, F.3    Prost, J.4    Sekimoto, K.5
  • 4
    • 84857545730 scopus 로고    scopus 로고
    • The Taylor-Couette motor: Spontaneous flows of active polar fluids between two coaxial cylinders
    • Furthauer S, Neef M, Grill S-W, Kruse K, Julicher F (2012) The Taylor-Couette motor: Spontaneous flows of active polar fluids between two coaxial cylinders. New J Phys 14(2):023001.
    • (2012) New J Phys , vol.14 , Issue.2 , pp. 023001
    • Furthauer, S.1    Neef, M.2    Grill, S.-W.3    Kruse, K.4    Julicher, F.5
  • 7
    • 34147166003 scopus 로고    scopus 로고
    • Concentration dependence of the collective dynamics of swimming bacteria
    • Sokolov A, Aranson I-S, Kessler JO, Goldstein RE (2007) Concentration dependence of the collective dynamics of swimming bacteria. Phys Rev Lett 98(15):158102.
    • (2007) Phys Rev Lett , vol.98 , Issue.15 , pp. 158102
    • Sokolov, A.1    Aranson, I.-S.2    Kessler, J.O.3    Goldstein, R.E.4
  • 8
    • 35948983037 scopus 로고    scopus 로고
    • Fluid dynamics of self-propelled microorganisms, from individuals to concentrated populations
    • DOI 10.1007/s00348-007-0387-y, Special issue: Animal locomotion: The hydrodynamics of swimming
    • Cisneros LH, Cortez R, Dombrowski C, Goldstein RE, Kessler JO (2007) Fluid dynamics of self-propelled microorganisms, from individuals to concentrated populations. Exp Fluids 43(5):737-753. (Pubitemid 350074176)
    • (2007) Experiments in Fluids , vol.43 , Issue.5 , pp. 737-753
    • Cisneros, L.H.1    Cortez, R.2    Dombrowski, C.3    Goldstein, R.E.4    Kessler, J.O.5
  • 9
    • 77956377721 scopus 로고    scopus 로고
    • Collective motion and density fluctuations in bacterial colonies
    • Zhang HP, Be'er A, Florin E-L, Swinney HL (2010) Collective motion and density fluctuations in bacterial colonies. Proc Natl Acad Sci USA 107(31):13626-13630.
    • (2010) Proc Natl Acad Sci USA , vol.107 , Issue.31 , pp. 13626-13630
    • Zhang, H.P.1    Be'er, A.2    Florin, E.-L.3    Swinney, H.L.4
  • 10
    • 84871273937 scopus 로고    scopus 로고
    • Physical properties of collective motion in suspensions of bacteria
    • Sokolov A, Aranson IS (2012) Physical properties of collective motion in suspensions of bacteria. Phys Rev Lett 109(24):248109.
    • (2012) Phys Rev Lett , vol.109 , Issue.24 , pp. 248109
    • Sokolov, A.1    Aranson, I.S.2
  • 11
    • 84869089951 scopus 로고    scopus 로고
    • Spontaneous motion in hierarchically assembled active matter
    • Sanchez T, Chen DTN, DeCamp SJ, Heymann M, Dogic Z (2012) Spontaneous motion in hierarchically assembled active matter. Nature 491(7424):431-434.
    • (2012) Nature , vol.491 , Issue.7424 , pp. 431-434
    • Sanchez, T.1    Chen, D.T.N.2    DeCamp, S.J.3    Heymann, M.4    Dogic, Z.5
  • 12
    • 84867790166 scopus 로고    scopus 로고
    • Spontaneous circulation of confined active suspensions
    • Woodhouse FG, Goldstein RE (2012) Spontaneous circulation of confined active suspensions. Phys Rev Lett 109(16):168105.
    • (2012) Phys Rev Lett , vol.109 , Issue.16 , pp. 168105
    • Woodhouse, F.G.1    Goldstein, R.E.2
  • 13
    • 84883341421 scopus 로고    scopus 로고
    • Cytoplasmic streaming in plant cells emerges naturally by microfilament self-organization
    • Woodhouse FG, Goldstein RE (2013) Cytoplasmic streaming in plant cells emerges naturally by microfilament self-organization. Proc Natl Acad Sci USA 110(35):14132-14137.
    • (2013) Proc Natl Acad Sci USA , vol.110 , Issue.35 , pp. 14132-14137
    • Woodhouse, F.G.1    Goldstein, R.E.2
  • 15
    • 77951921838 scopus 로고    scopus 로고
    • Large-scale collective properties of self-propelled rods
    • Ginelli F, Peruani F, Bär M, Chaté H (2010) Large-scale collective properties of self-propelled rods. Phys Rev Lett 104(18):184502.
    • (2010) Phys Rev Lett , vol.104 , Issue.18 , pp. 184502
    • Ginelli, F.1    Peruani, F.2    Bär, M.3    Chaté, H.4
  • 16
    • 84865988263 scopus 로고    scopus 로고
    • Meso-scale turbulence in living fluids
    • Wensink HH, et al. (2012) Meso-scale turbulence in living fluids. Proc Natl Acad Sci USA 109(36):14308-14313.
    • (2012) Proc Natl Acad Sci USA , vol.109 , Issue.36 , pp. 14308-14313
    • Wensink, H.H.1
  • 17
    • 18544400418 scopus 로고    scopus 로고
    • Hydrodynamic fluctuations and instabilities in ordered suspensions of self-propelled particles
    • Aditi Simha R, Ramaswamy S (2002) Hydrodynamic fluctuations and instabilities in ordered suspensions of self-propelled particles. Phys Rev Lett 89(5):058101.
    • (2002) Phys Rev Lett , vol.89 , Issue.5 , pp. 058101
    • Aditi Simha, R.1    Ramaswamy, S.2
  • 19
    • 84878411557 scopus 로고    scopus 로고
    • Fluid dynamics of bacterial turbulence
    • Dunkel J, et al. (2013) Fluid dynamics of bacterial turbulence. Phys Rev Lett 110(22):228102.
    • (2013) Phys Rev Lett , vol.110 , Issue.22 , pp. 228102
    • Dunkel, J.1
  • 20
    • 84894539132 scopus 로고    scopus 로고
    • The aquatic dance of bacteria
    • Aranson IS (2013) The aquatic dance of bacteria. Physics 6:61.
    • (2013) Physics , vol.6 , pp. 61
    • Aranson, I.S.1
  • 21
    • 84897889779 scopus 로고    scopus 로고
    • Hydrodynamics determines collective motion and phase behavior of active colloids in quasi-two-dimensional confinement
    • Zöttl A, Stark H (2014) Hydrodynamics determines collective motion and phase behavior of active colloids in quasi-two-dimensional confinement. Phys Rev Lett 112(11):118101.
    • (2014) Phys Rev Lett , vol.112 , Issue.11 , pp. 118101
    • Zöttl, A.1    Stark, H.2
  • 22
    • 77957900213 scopus 로고    scopus 로고
    • Direct measurement of the flow field around swimming microorganisms
    • Drescher K, Goldstein RE, Michel N, Polin M, Tuval I (2010) Direct measurement of the flow field around swimming microorganisms. Phys Rev Lett 105(16):168101.
    • (2010) Phys Rev Lett , vol.105 , Issue.16 , pp. 168101
    • Drescher, K.1    Goldstein, R.E.2    Michel, N.3    Polin, M.4    Tuval, I.5
  • 23
    • 77957899549 scopus 로고    scopus 로고
    • Oscillatory flows induced by microorganisms swimming in two dimensions
    • Guasto JS, Johnson KA, Gollub JP (2010) Oscillatory flows induced by microorganisms swimming in two dimensions. Phys Rev Lett 105(16):168102.
    • (2010) Phys Rev Lett , vol.105 , Issue.16 , pp. 168102
    • Guasto, J.S.1    Johnson, K.A.2    Gollub, J.P.3
  • 25
    • 70450092796 scopus 로고    scopus 로고
    • Dynamics of enhanced tracer diffusion in suspensions of swimming eukaryotic microorganisms
    • Leptos KC, Guasto JS, Gollub JP, Pesci AI, Goldstein RE (2009) Dynamics of enhanced tracer diffusion in suspensions of swimming eukaryotic microorganisms. Phys Rev Lett 103(19):198103.
    • (2009) Phys Rev Lett , vol.103 , Issue.19 , pp. 198103
    • Leptos, K.C.1    Guasto, J.S.2    Gollub, J.P.3    Pesci, A.I.4    Goldstein, R.E.5
  • 26
    • 78049310333 scopus 로고    scopus 로고
    • Fluid velocity fluctuations in a suspension of swimming protists
    • Rushkin I, Kantsler V, Goldstein RE (2010) Fluid velocity fluctuations in a suspension of swimming protists. Phys Rev Lett 105(18):188101.
    • (2010) Phys Rev Lett , vol.105 , Issue.18 , pp. 188101
    • Rushkin, I.1    Kantsler, V.2    Goldstein, R.E.3
  • 28
    • 57449088413 scopus 로고    scopus 로고
    • Amplified effect of Brownian motion in bacterial near-surface swimming
    • Li G, Tam L-K, Tang JX (2008) Amplified effect of Brownian motion in bacterial near-surface swimming. Proc Natl Acad Sci USA 105(47):18355-18359.
    • (2008) Proc Natl Acad Sci USA , vol.105 , Issue.47 , pp. 18355-18359
    • Li, G.1    Tam, L.-K.2    Tang, J.X.3
  • 29
    • 84872837939 scopus 로고    scopus 로고
    • Ciliary contact interactions dominate surface scattering of swimming eukaryotes
    • Kantsler V, Dunkel J, Polin M, Goldstein RE (2013) Ciliary contact interactions dominate surface scattering of swimming eukaryotes. Proc Natl Acad Sci USA 110(4):1187-1192.
    • (2013) Proc Natl Acad Sci USA , vol.110 , Issue.4 , pp. 1187-1192
    • Kantsler, V.1    Dunkel, J.2    Polin, M.3    Goldstein, R.E.4
  • 31
    • 40849136662 scopus 로고    scopus 로고
    • Coherent structures in monolayers of swimming particles
    • Ishikawa T, Pedley TJ (2008) Coherent structures in monolayers of swimming particles. Phys Rev Lett 100(8):088103.
    • (2008) Phys Rev Lett , vol.100 , Issue.8 , pp. 088103
    • Ishikawa, T.1    Pedley, T.J.2
  • 32
    • 34547523461 scopus 로고    scopus 로고
    • Orientational order and instabilities in suspensions of self-locomoting rods
    • Saintillan D, Shelley MJ (2007) Orientational order and instabilities in suspensions of self-locomoting rods. Phys Rev Lett 99(5):058102.
    • (2007) Phys Rev Lett , vol.99 , Issue.5 , pp. 058102
    • Saintillan, D.1    Shelley, M.J.2
  • 33
    • 43049109537 scopus 로고    scopus 로고
    • Instabilities and pattern formation in active particle suspensions: Kinetic theory and continuum simulations
    • Saintillan D, Shelley MJ (2008) Instabilities and pattern formation in active particle suspensions: Kinetic theory and continuum simulations. Phys Rev Lett 100(17):178103.
    • (2008) Phys Rev Lett , vol.100 , Issue.17 , pp. 178103
    • Saintillan, D.1    Shelley, M.J.2
  • 34
    • 84872229643 scopus 로고    scopus 로고
    • Confined active nematic flow in cylindrical capillaries
    • Ravnik M, Yeomans JM (2013) Confined active nematic flow in cylindrical capillaries. Phys Rev Lett 110(2):026001.
    • (2013) Phys Rev Lett , vol.110 , Issue.2 , pp. 026001
    • Ravnik, M.1    Yeomans, J.M.2
  • 35
    • 84878365601 scopus 로고    scopus 로고
    • Modeling and simulation of active suspensions containing large numbers of interacting micro-swimmers
    • Lushi E, Peskin CS (2013) Modeling and simulation of active suspensions containing large numbers of interacting micro-swimmers. Comput Struc 122:239-248.
    • (2013) Comput Struc , vol.122 , pp. 239-248
    • Lushi, E.1    Peskin, C.S.2
  • 38
    • 33751544551 scopus 로고    scopus 로고
    • The immersed boundary method
    • Peskin CS (2002) The immersed boundary method. Acta Numer 11:479-517.
    • (2002) Acta Numer , vol.11 , pp. 479-517
    • Peskin, C.S.1
  • 40
    • 0015444704 scopus 로고
    • Bacterial surface translocation: A survey and a classification
    • Henrichsen J (1972) Bacterial surface translocation: A survey and a classification. Bacteriol Rev 36(4):478-503.
    • (1972) Bacteriol Rev , vol.36 , Issue.4 , pp. 478-503
    • Henrichsen, J.1
  • 41
    • 84893358679 scopus 로고    scopus 로고
    • Collective motion of spherical bacteria
    • Rabani A, Ariel G, Be'er A (2013) Collective motion of spherical bacteria. PLoS ONE 8(12):e83760.
    • (2013) PLoS ONE , vol.8 , Issue.12
    • Rabani, A.1    Ariel, G.2    Be'Er, A.3
  • 42
    • 46249097169 scopus 로고    scopus 로고
    • Emergence of agent swarm migration and vortex formation through inelastic collisions
    • Grossman D, Aranson IS, Jacob EB (2008) Emergence of agent swarm migration and vortex formation through inelastic collisions. New J Phys 10(2):023036.
    • (2008) New J Phys , vol.10 , Issue.2 , pp. 023036
    • Grossman, D.1    Aranson, I.S.2    Jacob, E.B.3
  • 43
    • 53449094650 scopus 로고    scopus 로고
    • Aggregation of self-propelled colloidal rods near confining walls
    • Wensink HH, Löwen H (2008) Aggregation of self-propelled colloidal rods near confining walls. Phys Rev E Stat Nonlin Soft Matter Phys 78(3 Pt 1):031409.
    • (2008) Phys Rev E Stat Nonlin Soft Matter Phys , vol.78 , Issue.3 PART 1 , pp. 031409
    • Wensink, H.H.1    Löwen, H.2
  • 44
    • 46249125592 scopus 로고    scopus 로고
    • A molecular clutch disables flagella in the Bacillus subtilis biofilm
    • DOI 10.1126/science.1157877
    • Blair KM, Turner L, Winkelman JT, Berg HC, Kearns DB (2008) A molecular clutch disables flagella in the Bacillus subtilis biofilm. Science 320(5883):1636-1638. (Pubitemid 351931253)
    • (2008) Science , vol.320 , Issue.5883 , pp. 1636-1638
    • Blair, K.M.1    Turner, L.2    Winkelman, J.T.3    Berg, H.C.4    Kearns, D.B.5
  • 45
    • 84871442308 scopus 로고    scopus 로고
    • The cell biology of peritrichous flagella in Bacillus subtilis
    • Guttenplan SB, Shaw S, Kearns DB (2013) The cell biology of peritrichous flagella in Bacillus subtilis. Mol Microbiol 87(1):211-229.
    • (2013) Mol Microbiol , vol.87 , Issue.1 , pp. 211-229
    • Guttenplan, S.B.1    Shaw, S.2    Kearns, D.B.3
  • 46
    • 29144501313 scopus 로고    scopus 로고
    • Cell population heterogeneity during growth of Bacillus subtilis
    • DOI 10.1101/gad.1373905
    • Kearns DB, Losick R (2005) Cell population heterogeneity during growth of Bacillus subtilis. Genes Dev 19(24):3083-3094. (Pubitemid 41798122)
    • (2005) Genes and Development , vol.19 , Issue.24 , pp. 3083-3094
    • Kearns, D.B.1    Losick, R.2
  • 47
    • 33745720202 scopus 로고    scopus 로고
    • Available at Accessed June 16, 2014
    • Mori N, Chang K-A (2006) Introduction to MPIV. Available at www.oceanwave.jp/softwares/mpiv/index.php?FrontPage. Accessed June 16, 2014.
    • (2006) Introduction to MPIV
    • Mori, N.1    Chang, K.-A.2
  • 48
    • 0016381466 scopus 로고
    • Bacterial motility and chemotaxis: Light-induced tumbling response and visualization of individual flagella
    • Macnab R, Koshland DE, Jr. (1974) Bacterial motility and chemotaxis: Light-induced tumbling response and visualization of individual flagella. J Mol Biol 84(3):399-406.
    • (1974) J Mol Biol , vol.84 , Issue.3 , pp. 399-406
    • Macnab, R.1    Koshland Jr., D.E.2


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