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Volumn 15, Issue 1, 2014, Pages

Efficiently gap-filling reaction networks

Author keywords

Flux Balance Analysis (FBA); Gap filling; Linear Programming (LP); Mixed Integer Linear Programming (MILP); Reaction network; Systems biology

Indexed keywords

BIOLOGY; ESCHERICHIA COLI; FILLING; GENES;

EID: 84902902822     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-15-225     Document Type: Article
Times cited : (29)

References (10)
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    • Orth JD, Thiele I, Palsson BO. What is flux balance analysis?. Nat Biotech 2010, 28(3):245-248.
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    • Quantitative prediction of cellular metabolism with constraint-based models: The COBRA Toolbox
    • Becker SA, Feist AM, Mo ML, Hannum G, Palsson BO, Herrgard MJ. Quantitative prediction of cellular metabolism with constraint-based models: The COBRA Toolbox. Nat Protoc 2007, 2(3):727-738.
    • (2007) Nat Protoc , vol.2 , Issue.3 , pp. 727-738
    • Becker, S.A.1    Feist, A.M.2    Mo, M.L.3    Hannum, G.4    Palsson, B.O.5    Herrgard, M.J.6
  • 5
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    • 84856568013 scopus 로고    scopus 로고
    • Construction and completion of flux balance models from pathway databases
    • doi:10.1093/bioinformatics/btr681
    • Latendresse M, Krummenacker M, Trupp M, Karp PD. Construction and completion of flux balance models from pathway databases. Bioinformatics 2012, 28(3):388-396. doi:10.1093/bioinformatics/btr681.
    • (2012) Bioinformatics , vol.28 , Issue.3 , pp. 388-396
    • Latendresse, M.1    Krummenacker, M.2    Trupp, M.3    Karp, P.D.4
  • 7
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    • Optimization based automated curation of metabolic reconstructions
    • Kumar VS, Dasika MS, Maranas CD. Optimization based automated curation of metabolic reconstructions. BMC Bioinform 2007, 8:212.
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    • Kumar, V.S.1    Dasika, M.S.2    Maranas, C.D.3
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    • Gap detection for genome-scale constraint-based models
    • doi:10.1155/2012/323472. Article ID 323472
    • Brooks JP, Burns WP, Fong SS, Gowen CM, Roberts SB. Gap detection for genome-scale constraint-based models. Adv Bioinform 2012, doi:10.1155/2012/323472. Article ID 323472.
    • (2012) Adv Bioinform
    • Brooks, J.P.1    Burns, W.P.2    Fong, S.S.3    Gowen, C.M.4    Roberts, S.B.5
  • 10
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    • SCIP: Solving constraint integer programs
    • Achterberg T. SCIP: Solving constraint integer programs. Math Program Comput 2009, 1(1):1-41.
    • (2009) Math Program Comput , vol.1 , Issue.1 , pp. 1-41
    • Achterberg, T.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.