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Volumn 64, Issue PART 6, 2014, Pages 2003-2008

Burkholderia cordobensis sp. nov., from agricultural soils

Author keywords

[No Author keywords available]

Indexed keywords

DNA TOPOISOMERASE (ATP HYDROLYSING) B; RNA 16S;

EID: 84902681498     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.059667-0     Document Type: Article
Times cited : (17)

References (38)
  • 1
  • 2
    • 0041350484 scopus 로고    scopus 로고
    • Diversity and significance of Burkholderia species occupying diverse ecological niches
    • Coenye, T. & Vandamme, P. (2003). Diversity and significance of Burkholderia species occupying diverse ecological niches. Environ Microbiol 5, 719-729.
    • (2003) Environ Microbiol , vol.5 , pp. 719-729
    • Coenye, T.1    Vandamme, P.2
  • 3
    • 44849124999 scopus 로고    scopus 로고
    • Diversity and occurrence of Burkholderia spp. in the natural environment
    • Compant, S., Nowak, J., Coenye, T., Clément, C. & Ait Barka, E. (2008). Diversity and occurrence of Burkholderia spp. in the natural environment. FEMS Microbiol Rev 32, 607-626.
    • (2008) FEMS Microbiol Rev , vol.32 , pp. 607-626
    • Compant, S.1    Nowak, J.2    Coenye, T.3    Clément, C.4    Ait Barka, E.5
  • 5
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • Edgar, R. C. (2004). MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32, 1792-1797.
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 6
    • 0024358339 scopus 로고
    • Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains
    • Ezaki, T., Hashimoto, Y. & Yabuuchi, E. (1989). Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39, 224-229.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 224-229
    • Ezaki, T.1    Hashimoto, Y.2    Yabuuchi, E.3
  • 8
    • 77957930925 scopus 로고    scopus 로고
    • Molecular insights into Burkholderia pseudomallei and Burkholderia mallei pathogenesis
    • Galyov, E. E., Brett, P. J. & DeShazer, D. (2010). Molecular insights into Burkholderia pseudomallei and Burkholderia mallei pathogenesis. Annu Rev Microbiol 64, 495-517.
    • (2010) Annu Rev Microbiol , vol.64 , pp. 495-517
    • Galyov, E.E.1    Brett, P.J.2    DeShazer, D.3
  • 10
    • 0032434673 scopus 로고    scopus 로고
    • Evaluation of a microplate DNA-DNA hybridization method compared with the initial renaturation method
    • Goris, J., Suzuki, K., De Vos, P., Nakase, T. & Kersters, K. (1998). Evaluation of a microplate DNA-DNA hybridization method compared with the initial renaturation method. Can J Microbiol 44, 1148-1153.
    • (1998) Can J Microbiol , vol.44 , pp. 1148-1153
    • Goris, J.1    Suzuki, K.2    De Vos, P.3    Nakase, T.4    Kersters, K.5
  • 12
    • 0022376704 scopus 로고
    • Dating of the humanape splitting by a molecular clock of mitochondrial DNA
    • Hasegawa, M., Kishino, H. & Yano, T. (1985). Dating of the humanape splitting by a molecular clock of mitochondrial DNA. J Mol Evol 22, 160-174.
    • (1985) J Mol Evol , vol.22 , pp. 160-174
    • Hasegawa, M.1    Kishino, H.2    Yano, T.3
  • 13
    • 0007778422 scopus 로고
    • Rapid method for determining the activity of microorganisms on nucleic acids
    • Jeffries, C. D., Holtman, D. F. & Guse, D. G. (1957). Rapid method for determining the activity of microorganisms on nucleic acids. J Bacteriol 73, 590-591.
    • (1957) J Bacteriol , vol.73 , pp. 590-591
    • Jeffries, C.D.1    Holtman, D.F.2    Guse, D.G.3
  • 14
    • 22144450351 scopus 로고    scopus 로고
    • Gut symbiotic bacteria of the genus Burkholderia in the broad-headed bugs Riptortus clavatus and Leptocorisa chinensis (Heteroptera: Alydidae)
    • Kikuchi, Y., Meng, X. Y. & Fukatsu, T. (2005). Gut symbiotic bacteria of the genus Burkholderia in the broad-headed bugs Riptortus clavatus and Leptocorisa chinensis (Heteroptera: Alydidae). Appl Environ Microbiol 71, 4035-4043.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 4035-4043
    • Kikuchi, Y.1    Meng, X.Y.2    Fukatsu, T.3
  • 15
    • 0142104345 scopus 로고    scopus 로고
    • Invasion of spores of the arbuscular mycorrhizal fungus Gigaspora decipiens by Burkholderia spp
    • Levy, A., Chang, B. J., Abbott, L. K., Kuo, J., Harnett, G. & Inglis, T. J. (2003). Invasion of spores of the arbuscular mycorrhizal fungus Gigaspora decipiens by Burkholderia spp. Appl Environ Microbiol 69, 6250-6256.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 6250-6256
    • Levy, A.1    Chang, B.J.2    Abbott, L.K.3    Kuo, J.4    Harnett, G.5    Inglis, T.J.6
  • 16
    • 84863132392 scopus 로고    scopus 로고
    • Complete genome sequence of the fenitrothion-degrading Burkholderia sp. strain YI23
    • Lim, J. S., Choi, B. S., Choi, A. Y., Kim, K. D., Kim, D. I., Choi, I. Y. & Ka, J. O. (2012). Complete genome sequence of the fenitrothion-degrading Burkholderia sp. strain YI23. J Bacteriol 194, 896.
    • (2012) J Bacteriol , vol.194 , pp. 896
    • Lim, J.S.1    Choi, B.S.2    Choi, A.Y.3    Kim, K.D.4    Kim, D.I.5    Choi, I.Y.6    Ka, J.O.7
  • 17
    • 44249085887 scopus 로고    scopus 로고
    • Burkholderia cepacia complex bacteria: Opportunistic pathogens with important natural biology
    • Mahenthiralingam, E., Baldwin, A. & Dowson, C. G. (2008). Burkholderia cepacia complex bacteria: opportunistic pathogens with important natural biology. J Appl Microbiol 104, 1539-1551.
    • (2008) J Appl Microbiol , vol.104 , pp. 1539-1551
    • Mahenthiralingam, E.1    Baldwin, A.2    Dowson, C.G.3
  • 18
    • 0024325620 scopus 로고
    • Measurement of deoxyguanosine/ thymidine ratios in complex mixtures by high-performance liquid chromatography for determination of the mole percentage guanine + cytosine of DNA
    • Mesbah, M. & Whitman, W. B. (1989). Measurement of deoxyguanosine/ thymidine ratios in complex mixtures by high-performance liquid chromatography for determination of the mole percentage guanine + cytosine of DNA. J Chromatogr A 479, 297-306.
    • (1989) J Chromatogr A , vol.479 , pp. 297-306
    • Mesbah, M.1    Whitman, W.B.2
  • 19
    • 0030904848 scopus 로고    scopus 로고
    • Evaluation of the resolving power of three different DNA fingerprinting methods to discriminate among isolates of a natural Rhizobium meliloti population
    • Niemann, S., Pühler, A., Tichy, H. V., Simon, R. & Selbitschka, W. (1997). Evaluation of the resolving power of three different DNA fingerprinting methods to discriminate among isolates of a natural Rhizobium meliloti population. J Appl Microbiol 82, 477-484.
    • (1997) J Appl Microbiol , vol.82 , pp. 477-484
    • Niemann, S.1    Pühler, A.2    Tichy, H.V.3    Simon, R.4    Selbitschka, W.5
  • 21
    • 0034794149 scopus 로고    scopus 로고
    • Diversity of the Burkholderia cepacia complex and implications for risk assessment of biological control strains
    • Parke, J. L. & Gurian-Sherman, D. (2001). Diversity of the Burkholderia cepacia complex and implications for risk assessment of biological control strains. Annu Rev Phytopathol 39, 225-258.
    • (2001) Annu Rev Phytopathol , vol.39 , pp. 225-258
    • Parke, J.L.1    Gurian-Sherman, D.2
  • 22
    • 84884207152 scopus 로고    scopus 로고
    • Burkholderia pseudomultivorans sp. nov., a novel Burkholderia cepacia complex species from human respiratory samples and the rhizosphere
    • Peeters, C., Zlosnik, J. E. A., Spilker, T., Hird, T. J., LiPuma, J. J. & Vandamme, P. (2013). Burkholderia pseudomultivorans sp. nov., a novel Burkholderia cepacia complex species from human respiratory samples and the rhizosphere. Syst Appl Microbiol 36, 483-489.
    • (2013) Syst Appl Microbiol , vol.36 , pp. 483-489
    • Peeters, C.1    Zlosnik, J.E.A.2    Spilker, T.3    Hird, T.J.4    LiPuma, J.J.5    Vandamme, P.6
  • 23
    • 0024553747 scopus 로고
    • Rapid extraction of bacterial genomic DNA with guanidium thiocyanate
    • Pitcher, D. G., Saunders, N. A. & Owen, R. J. (1989). Rapid extraction of bacterial genomic DNA with guanidium thiocyanate. Lett Appl Microbiol 8, 151-156.
    • (1989) Lett Appl Microbiol , vol.8 , pp. 151-156
    • Pitcher, D.G.1    Saunders, N.A.2    Owen, R.J.3
  • 24
    • 33748700820 scopus 로고    scopus 로고
    • Effect of agricultural management regime on Burkholderia community structure in soil
    • Salles, J. F., van Elsas, J. D. & van Veen, J. A. (2006a). Effect of agricultural management regime on Burkholderia community structure in soil. Microb Ecol 52, 267-279.
    • (2006) Microb Ecol , vol.52 , pp. 267-279
    • Salles, J.F.1    van Elsas, J.D.2    van Veen, J.A.3
  • 25
    • 33645274889 scopus 로고    scopus 로고
    • Changes in agricultural management drive the diversity of Burkholderia species isolated from soil on PCAT medium
    • Salles, J. F., Samyn, E., Vandamme, P., van Veen, J. A. & van Elsas, J. D. (2006b). Changes in agricultural management drive the diversity of Burkholderia species isolated from soil on PCAT medium. Soil Biol Biochem 38, 661-673.
    • (2006) Soil Biol Biochem , vol.38 , pp. 661-673
    • Salles, J.F.1    Samyn, E.2    Vandamme, P.3    van Veen, J.A.4    van Elsas, J.D.5
  • 27
    • 51249194274 scopus 로고
    • A simple method for the detection of lipolytic activity of micro-organisms and some observations on the influence of the contact between cells and fatty substrates
    • Sierra, G. (1957). A simple method for the detection of lipolytic activity of micro-organisms and some observations on the influence of the contact between cells and fatty substrates. Antonie van Leeuwenhoek 23, 15-22.
    • (1957) Antonie van Leeuwenhoek , vol.23 , pp. 15-22
    • Sierra, G.1
  • 30
    • 0026711010 scopus 로고
    • Estimation of the number of nucleotide substitutions when there are strong transition-transversion and G+C-content biases
    • Tamura, K. (1992). Estimation of the number of nucleotide substitutions when there are strong transition-transversion and G+C-content biases. Mol Biol Evol 9, 678-687.
    • (1992) Mol Biol Evol , vol.9 , pp. 678-687
    • Tamura, K.1
  • 31
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M. & Kumar, S. (2011). MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28, 2731-2739.
    • (2011) Mol Biol Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 32
    • 84878878502 scopus 로고    scopus 로고
    • Burkholderia grimmiae sp. nov., isolated from a xerophilous moss (Grimmia montana)
    • Tian, Y., Kong, B. H., Liu, S. L., Li, C. L., Yu, R., Liu, L. & Li, Y. H. (2013). Burkholderia grimmiae sp. nov., isolated from a xerophilous moss (Grimmia montana). Int J Syst Evol Microbiol 63, 2108-2113.
    • (2013) Int J Syst Evol Microbiol , vol.63 , pp. 2108-2113
    • Tian, Y.1    Kong, B.H.2    Liu, S.L.3    Li, C.L.4    Yu, R.5    Liu, L.6    Li, Y.H.7
  • 33
    • 79952533350 scopus 로고    scopus 로고
    • Classification and identification of the Burkholderia cepacia complex: Past, present and future
    • Vandamme, P. & Dawyndt, P. (2011). Classification and identification of the Burkholderia cepacia complex: past, present and future. Syst Appl Microbiol 34, 87-95.
    • (2011) Syst Appl Microbiol , vol.34 , pp. 87-95
    • Vandamme, P.1    Dawyndt, P.2
  • 34
    • 84889605860 scopus 로고    scopus 로고
    • Burkholderia humi sp. nov., Burkholderia choica sp. nov., Burkholderia telluris sp. nov., Burkholderia terrestris sp. nov. and Burkholderia udeis sp. nov.: Burkholderia glatheilike bacteria from soil and rhizosphere soil
    • Vandamme, P., De Brandt, E., Houf, K., Salles, J. F., van Elsas, J. D., Spilker, T. & Lipuma, J. J. (2013). Burkholderia humi sp. nov., Burkholderia choica sp. nov., Burkholderia telluris sp. nov., Burkholderia terrestris sp. nov. and Burkholderia udeis sp. nov.: Burkholderia glatheilike bacteria from soil and rhizosphere soil. Int J Syst Evol Microbiol 63, 4707-4718.
    • (2013) Int J Syst Evol Microbiol , vol.63 , pp. 4707-4718
    • Vandamme, P.1    De Brandt, E.2    Houf, K.3    Salles, J.F.4    van Elsas, J.D.5    Spilker, T.6    Lipuma, J.J.7
  • 35
    • 84872839743 scopus 로고    scopus 로고
    • Symbiotic β-proteobacteria beyond legumes: Burkholderia in Rubiaceae
    • Verstraete, B., Janssens, S., Smets, E. & Dessein, S. (2013). Symbiotic β-proteobacteria beyond legumes: Burkholderia in Rubiaceae. PLoS ONE 8, e55260.
    • (2013) PLoS ONE , vol.8
    • Verstraete, B.1    Janssens, S.2    Smets, E.3    Dessein, S.4
  • 36
    • 78650771854 scopus 로고    scopus 로고
    • The various lifestyles of the Burkholderia cepacia complex species: A tribute to adaptation
    • Vial, L., Chapalain, A., Groleau, M. C. & Déziel, E. (2011). The various lifestyles of the Burkholderia cepacia complex species: a tribute to adaptation. Environ Microbiol 13, 1-12.
    • (2011) Environ Microbiol , vol.13 , pp. 1-12
    • Vial, L.1    Chapalain, A.2    Groleau, M.C.3    Déziel, E.4
  • 38
    • 0027096070 scopus 로고
    • Proposal of Burkholderia gen. nov. and transfer of seven species of the genus Pseudomonas homology group II to the new genus, with the type species Burkholderia cepacia (Palleroni and Holmes 1981) comb. nov
    • Yabuuchi, E., Kosako, Y., Oyaizu, H., Yano, I., Hotta, H., Hashimoto, Y., Ezaki, T. & Arakawa, M. (1992). Proposal of Burkholderia gen. nov. and transfer of seven species of the genus Pseudomonas homology group II to the new genus, with the type species Burkholderia cepacia (Palleroni and Holmes 1981) comb. nov. Microbiol Immunol 36, 1251-1275.
    • (1992) Microbiol Immunol , vol.36 , pp. 1251-1275
    • Yabuuchi, E.1    Kosako, Y.2    Oyaizu, H.3    Yano, I.4    Hotta, H.5    Hashimoto, Y.6    Ezaki, T.7    Arakawa, M.8


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