CTX prophages in Vibrio cholerae O1 strains

Journal of Microbiology and Biotechnology

Volumn 24, Issue 6, 2014, Pages 725-731

  Kim, Eun Jin ^a   Lee, Dokyung ^a   Moon, Se Hoon ^a   Lee, Chan Hee ^a   Kim, Dong Wook ^a  

^a Hanyang University   (South Korea)

Author keywords

Atypical El Tor; Cholera; Cholera toxin; V. cholerae

Indexed keywords

BACTERIAL CHROMOSOME; BACTERIAL STRAIN; BIOTYPE; CHOLERA TOXIN ENCODING PHAGE; CHROMOSOME 1; CHROMOSOME 2; CLASSIFICATION; DNA SEQUENCE; GENE SEQUENCE; GENE STRUCTURE; GENETIC TRANSCRIPTION; GENOMIC ISLAND; HUMAN; MOLECULAR PHYLOGENY; NONHUMAN; NUCLEOTIDE SEQUENCE; PANDEMIC; POPULATION DIFFERENTIATION; PROPHAGE; REVIEW; SINGLE NUCLEOTIDE POLYMORPHISM; STRAIN DIFFERENCE; VIBRIO CHOLERAE; BACTERIOPHAGE; CHOLERA; GENETICS; ISOLATION AND PURIFICATION; MICROBIOLOGY; VIROLOGY; VIRUS GENOME;

BACTERIOPHAGES; CHOLERA; GENOME, VIRAL; PROPHAGES; VIBRIO CHOLERAE O1;

EID: 84902591291     PISSN: 10177825     EISSN: 17388872     Source Type: Journal    
DOI: 10.4014/jmb.1403.03063     Document Type: Review

References (22)

1. Ansaruzzaman M, Bhuiyan NA, Nair BG, Sack DA, Lucas M, Deen JL, et al. 2004. Cholera in Mozambique, variant o f Vibrio cholerae. Emerg. Infect. Dis. 10: 2057-2059.
2. Basu A, Mukhopadhyay AK, Garg P, Chakraborty S, Ramamurthy T, Yamasaki S, et al. 2000. Diversity in the arrangement of the CTX prophages in classical strains of Vibrio cholerae O1. FEMS Microbiol. Lett. 182: 35-40.
3. Chin CS, Sorenson J, Harris JB, Robins WP, Charles RC, Jean-Charles RR, et al. 2011. The origin of the Haitian cholera outbreak strain. N. Engl. J. Med. 364: 33-42.
4. Choi SY, Lee JH, Jeon YS, Lee HR, Kim EJ, Ansaruzzaman M, et al. 2010. Multilocus variable-number tandem repeat analysis of Vibrio cholerae O1 El Tor s trains h arbouring classical toxin B. J. Med. Microbiol. 59: 763-769.
5. Chun J, Grim CJ, Hasan NA, Lee JH, Choi SY, Haley BJ, et al. 2009. Comparative genomics reveals mechanism for shortterm and long-term clonal transitions in pandemic Vibrio cholerae. Proc. Natl. Acad. Sci. USA 106: 15442-15447.
6. Clark CA, Purins L, Kaewrakon P, Focareta T, Manning PA. 2000. The Vibrio cholerae O1 chromosomal integron. Microbiology 146: 2605-2612.
7. Davis BM, Moyer KE, Boyd EF, Waldor MK. 2000. CTX prophages in classical biotype Vibrio cholerae: functional phage genes but dysfunctional phage genomes. J. Bacteriol. 182: 6992-6998.
8. Davis BM, Waldor MK. 2000. CTXΦ contains a hybrid genome derived from tandemly integrated elements. Proc. Natl. Acad. Sci. USA 97: 8572-8577.
9. Faruque SM, Tam VC, Chowdhury N, Diraphat P, Dziejman M, Heidelberg JF, et al. 2007. Genomic analysis of the Mozambique strain of Vibrio cholerae O1 reveals the origin of El Tor strains carrying classical CTX prophage. Proc. Natl. Acad. Sci. USA 104: 5151-5156.
10. Grim CJ, Hasan NA, Taviani E, Haley B, Chun J, Brettin TS, et al. 2010. Genome sequence of hybrid Vibrio cholerae O1 MJ-1236, B-33, and CIRS101 and comparative genomics with V. cholerae. J. Bacteriol. 192: 3524-3533.
11. Horwood PF, Collins D, Jonduo MH, Rosewell A, Dutta SR, Dagina R, et al. 2011. Clonal o rigins o f Vibrio cholerae O1 El Tor strains, Papua New Guinea, 2009-2011. Emerg. Infect. Dis. 17: 2063-2065.
12. Kaper JB, Bradford HB, Roberts NC, Falkow S. 1982. Molecular epidemiology of Vibrio cholerae in the U.S. Gulf Coast. J. Clin. Microbiol. 16: 129-134.
13. Kaper JB, Morris Jr JG, Levine MM. 1995. Cholera. Clin. Microbiol. Rev. 8: 48-86.
14. Lee JH, Choi SY, Jeon YS, Lee HR, Kim EJ, Nguyen BM, et al. 2009. Classification of hybrid and altered Vibrio cholerae strains by CTX prophage and RS1 element structure. J. Microbiol. 47: 783-788.
15. Lee JH, Han KH, Choi SY, Lucas ME, Mondlane C, Ansaruzzaman M, et al. 2006. Multilocus sequence typing (MLST) analysis of Vibrio cholerae O1 El Tor isolates f rom Mozambique that harbour the classical CTX prophage. J. Med. Microbiol. 55: 165-170.
16. Mutreja A, Kim DW, Thomson NR, Connor TR, Lee JH, Kariuki S, et al. 2011. Evidence for several waves of global transmission in the seventh cholera pandemic. Nature 477: 462-465.
17. Naha A, Pazhani GP, Ganguly M, Ghosh S, Ramamurthy T, Nandy RK, et al. 2012. Development and evaluation of a PCR assay for tracking the emergence and dissemination of Haitian variant ctxB in Vibrio cholerae O1 strains isolated from Kolkata, India. J. Clin. Microbiol. 50: 1733-1736.
18. Nguyen BM, Lee JH, Cuong NT, Choi SY, Hien NT, Anh DD, et al. 2009. Cholera outbreaks caused by an altered Vibrio cholerae O1 El Tor biotype strain producing classical cholera toxin B in Vietnam in 2007 to 2008. J. Clin. Microbiol. 47: 1568-1571.
19. Safa A, Bhuiyan NA, Murphy D, Bates J, Nusrin S, Kong RY, et al. 2009. Multilocus genetic analysis reveals that the Australian strains of Vibrio cholerae O1 are similar to the pre-seventh pandemic strains of the El Tor biotype. J. Med. Microbiol. 58: 105-111.
20. Safa A, Nair GB, Kong RY. 2010. Evol ution of new variants of Vibrio cholerae O1. Trends Microbiol. 18: 46-54.
21. Siddique AK, Nair GB, Alam M, Sack DA, Huq A, Nizam A, et al. 2010. El Tor c holera with s evere disease: a n ew threat to Asia and beyond. Epidemiol. Infect. 138: 347-352.
22. Tran HD, Alam M, Trung NV, Kinh NV, Nguyen HH, Pham VC, et al. 2012. Multi-drug resistant Vibrio cholerae O1 variant El Tor isolated in northern Vietnam between 2007 and 2010. J. Med. Microbiol. 61: 431-437.