-
1
-
-
28444465858
-
MACiE: a database of enzyme reaction mechanisms
-
10.1093/bioinformatics/bti693, 2748267, 16188925
-
Holliday GL, Bartlett GJ, Almonacid DE, O'Boyle NM, Murray-Rust P, Thornton JM, Mitchell JBO. MACiE: a database of enzyme reaction mechanisms. Bioinformatics 2005, 21(23):4315-4316. [http://dx.doi.org/10.1093/bioinformatics/bti693], 10.1093/bioinformatics/bti693, 2748267, 16188925.
-
(2005)
Bioinformatics
, vol.21
, Issue.23
, pp. 4315-4316
-
-
Holliday, G.L.1
Bartlett, G.J.2
Almonacid, D.E.3
O'Boyle, N.M.4
Murray-Rust, P.5
Thornton, J.M.6
Mitchell, J.B.O.7
-
2
-
-
33846120419
-
MACiE (mechanism, annotation and classification in enzymes): novel tools for searching catalytic mechanisms
-
1634735, 17082206
-
Holliday GL, Almonacid DE, Bartlett GJ, O'Boyle NM, Torrance JW, Murray-Rust P, Mitchell JBO, Thornton JM. MACiE (mechanism, annotation and classification in enzymes): novel tools for searching catalytic mechanisms. Nucleic Acids Res 2007, 35(Database issue):D515-D520. [http://dx.doi.org/10.1093/nar/gkl774], 1634735, 17082206.
-
(2007)
Nucleic Acids Res
, vol.35
, Issue.Database issue
-
-
Holliday, G.L.1
Almonacid, D.E.2
Bartlett, G.J.3
O'Boyle, N.M.4
Torrance, J.W.5
Murray-Rust, P.6
Mitchell, J.B.O.7
Thornton, J.M.8
-
3
-
-
84861130663
-
MACiE: exploring the diversity of biochemical reactions
-
3244993, 22058127
-
Holliday GL, Andreini C, Fischer JD, Rahman SA, Almonacid DE, Williams ST, Pearson WR. MACiE: exploring the diversity of biochemical reactions. Nucleic Acids Res 2012, 40(Database issue):D783-D789. [http://dx.doi.org/10.1093/nar/gkr799], 3244993, 22058127.
-
(2012)
Nucleic Acids Res
, vol.40
, Issue.Database issue
-
-
Holliday, G.L.1
Andreini, C.2
Fischer, J.D.3
Rahman, S.A.4
Almonacid, D.E.5
Williams, S.T.6
Pearson, W.R.7
-
4
-
-
84858602406
-
InterPro in 2011: new developments in the family and domain prediction database
-
3245097, 22096229
-
Hunter S, Jones P, Mitchell A, Apweiler R, Attwood TK, Bateman A, Bernard T, Binns D, Bork P, Burge S, de Castro E, Coggill P, Corbett M, Das U, Daugherty L, Duquenne L, Finn RD, Fraser M, Gough J, Haft D, Hulo N, Kahn D, Kelly E, Letunic I, Lonsdale D, Lopez R, Madera M, Maslen J, McAnulla C, McDowall J, et al. InterPro in 2011: new developments in the family and domain prediction database. Nucleic Acids Res 2012, 40(Database issue):D306-D312. [http://dx.doi.org/10.1093/nar/gkr948], 3245097, 22096229.
-
(2012)
Nucleic Acids Res
, vol.40
, Issue.Database issue
-
-
Hunter, S.1
Jones, P.2
Mitchell, A.3
Apweiler, R.4
Attwood, T.K.5
Bateman, A.6
Bernard, T.7
Binns, D.8
Bork, P.9
Burge, S.10
de Castro, E.11
Coggill, P.12
Corbett, M.13
Das, U.14
Daugherty, L.15
Duquenne, L.16
Finn, R.D.17
Fraser, M.18
Gough, J.19
Haft, D.20
Hulo, N.21
Kahn, D.22
Kelly, E.23
Letunic, I.24
Lonsdale, D.25
Lopez, R.26
Madera, M.27
Maslen, J.28
McAnulla, C.29
McDowall, J.30
more..
-
5
-
-
0345864027
-
The Catalytic Site Atlas: a resource of catalytic sites and residues identified in enzymes using structural data
-
308762, 14681376
-
Porter CT, Bartlett GJ, Thornton JM. The Catalytic Site Atlas: a resource of catalytic sites and residues identified in enzymes using structural data. Nucleic Acids Res 2004, 32(Database issue):D129-D133. [http://dx.doi.org/10.1093/nar/gkh028], 308762, 14681376.
-
(2004)
Nucleic Acids Res
, vol.32
, Issue.Database issue
-
-
Porter, C.T.1
Bartlett, G.J.2
Thornton, J.M.3
-
6
-
-
84876529328
-
The RCSB protein data bank: new resources for research and education
-
3531086, 23193259
-
Rose PW, Bi C, Bluhm WF, Christie CH, Dimitropoulos D, Dutta S, Green RK, Goodsell DS, Prlic A, Quesada M, Quinn GB, Ramos AG, Westbrook JD, Young J, Zardecki C, Berman HM, Bourne PE. The RCSB protein data bank: new resources for research and education. Nucleic Acids Res 2013, 41(Database issue):D475-D482. [http://dx.doi.org/10.1093/nar/gks1200], 3531086, 23193259.
-
(2013)
Nucleic Acids Res
, vol.41
, Issue.Database issue
-
-
Rose, P.W.1
Bi, C.2
Bluhm, W.F.3
Christie, C.H.4
Dimitropoulos, D.5
Dutta, S.6
Green, R.K.7
Goodsell, D.S.8
Prlic, A.9
Quesada, M.10
Quinn, G.B.11
Ramos, A.G.12
Westbrook, J.D.13
Young, J.14
Zardecki, C.15
Berman, H.M.16
Bourne, P.E.17
-
7
-
-
0042622243
-
SVM-Prot: Web-based support vector machine software for functional classification of a protein from its primary sequence
-
10.1093/nar/gkg600, 169006, 12824396
-
Cai CZ, Han LY, Ji ZL, Chen X, Chen YZ. SVM-Prot: Web-based support vector machine software for functional classification of a protein from its primary sequence. Nucleic Acids Res 2003, 31(13):3692-3697. 10.1093/nar/gkg600, 169006, 12824396.
-
(2003)
Nucleic Acids Res
, vol.31
, Issue.13
, pp. 3692-3697
-
-
Cai, C.Z.1
Han, L.Y.2
Ji, Z.L.3
Chen, X.4
Chen, Y.Z.5
-
8
-
-
1442275650
-
Enzyme family classification by support vector machines
-
10.1002/prot.20045, 14997540
-
Cai CZ, Han LY, Ji ZL, Chen YZ. Enzyme family classification by support vector machines. Proteins 2004, 55:66-76. [http://dx.doi.org/10.1002/prot.20045], 10.1002/prot.20045, 14997540.
-
(2004)
Proteins
, vol.55
, pp. 66-76
-
-
Cai, C.Z.1
Han, L.Y.2
Ji, Z.L.3
Chen, Y.Z.4
-
9
-
-
84860154266
-
EnzML: Multi-label prediction of enzyme classes using InterPro signatures
-
10.1186/1471-2105-13-61, 3483700, 22533924
-
De Ferrari L, Aitken S, van Hemert J, Goryanin I. EnzML: Multi-label prediction of enzyme classes using InterPro signatures. BMC Bioinformatics 2012, 13:61. 10.1186/1471-2105-13-61, 3483700, 22533924.
-
(2012)
BMC Bioinformatics
, vol.13
, pp. 61
-
-
De Ferrari, L.1
Aitken, S.2
van Hemert, J.3
Goryanin, I.4
-
10
-
-
78650698479
-
EMBM - a new enzyme mechanism-based method for rational design of chemical sites of covalent inhibitors
-
10.1021/ci100330y, 3010454, 21090595
-
Traube T, Vijayakumar S, Hirsch M, Uritsky N, Shokhen M, Albeck A. EMBM - a new enzyme mechanism-based method for rational design of chemical sites of covalent inhibitors. J Chem Inf Model 2010, 50(12):2256-2265. [http://dx.doi.org/10.1021/ci100330y], 10.1021/ci100330y, 3010454, 21090595.
-
(2010)
J Chem Inf Model
, vol.50
, Issue.12
, pp. 2256-2265
-
-
Traube, T.1
Vijayakumar, S.2
Hirsch, M.3
Uritsky, N.4
Shokhen, M.5
Albeck, A.6
-
11
-
-
80053373164
-
Sequence-based enzyme catalytic domain prediction using clustering and aggregated mutual information content
-
10.1142/S0219720011005677, 21976378
-
Choi K, Kim S. Sequence-based enzyme catalytic domain prediction using clustering and aggregated mutual information content. J Bioinform Comput Biol 2011, 9(5):597-611. 10.1142/S0219720011005677, 21976378.
-
(2011)
J Bioinform Comput Biol
, vol.9
, Issue.5
, pp. 597-611
-
-
Choi, K.1
Kim, S.2
-
12
-
-
34249308113
-
Livesay DR: How accurate and statistically robust are catalytic site predictions based on closeness centrality?
-
10.1186/1471-2105-8-153, 1876251, 17498304
-
Chea E. Livesay DR: How accurate and statistically robust are catalytic site predictions based on closeness centrality?. BMC Bioinformatics 2007, 8:153. [http://dx.doi.org/10.1186/1471-2105-8-153], 10.1186/1471-2105-8-153, 1876251, 17498304.
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 153
-
-
Chea, E.1
-
13
-
-
35348873256
-
Predicting active site residue annotations in the Pfam database
-
10.1186/1471-2105-8-298, 2025603, 17688688
-
Mistry J, Bateman A, Finn RD. Predicting active site residue annotations in the Pfam database. BMC Bioinformatics 2007, 8:298. [http://dx.doi.org/10.1186/1471-2105-8-298], 10.1186/1471-2105-8-298, 2025603, 17688688.
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 298
-
-
Mistry, J.1
Bateman, A.2
Finn, R.D.3
-
14
-
-
13444302754
-
EzCatDB: the enzyme catalytic-mechanism database
-
540034, 15608227
-
Nagano N. EzCatDB: the enzyme catalytic-mechanism database. Nucleic Acids Res 2005, 33(Database issue):D407-D412. [http://dx.doi.org/10.1093/nar/gki080], 540034, 15608227.
-
(2005)
Nucleic Acids Res
, vol.33
, Issue.Database issue
-
-
Nagano, N.1
-
15
-
-
43349084847
-
Using the structure-function linkage database to characterize functional domains in enzymes
-
Unit 2.10 Chapter 2
-
Brown S, Babbitt P. Using the structure-function linkage database to characterize functional domains in enzymes. Curr Protoc Bioinformatics 2006, Chapter 2:Unit 2.10. [http://dx.doi.org/10.1002/0471250953.bi0210s13].
-
(2006)
Curr Protoc Bioinformatics
-
-
Brown, S.1
Babbitt, P.2
-
16
-
-
84874724662
-
Update on activities at the universal protein resource (UniProt) in 2013
-
3531094, 23161681
-
Consortium U. Update on activities at the universal protein resource (UniProt) in 2013. Nucleic Acids Res 2013, 41(Database issue):D43-D47. 3531094, 23161681.
-
(2013)
Nucleic Acids Res
, vol.41
, Issue.Database issue
-
-
Consortium, U.1
-
17
-
-
84864434718
-
ExPASy: SIB bioinformatics resource portal
-
3394269, 22661580
-
Artimo P, Jonnalagedda M, Arnold K, Baratin D, Csardi G, de Castro E, Duvaud S, Flegel V, Fortier A, Gasteiger E, Grosdidier A, Hernandez C, Ioannidis V, Kuznetsov D, Liechti R, Moretti S, Mostaguir K, Redaschi N, Rossier G, Xenarios I, Stockinger H. ExPASy: SIB bioinformatics resource portal. Nucleic Acids Res 2012, 40(Web Server issue):W597-W603. [http://dx.doi.org/10.1093/nar/gks400], 3394269, 22661580.
-
(2012)
Nucleic Acids Res
, vol.40
, Issue.Web Server issue
-
-
Artimo, P.1
Jonnalagedda, M.2
Arnold, K.3
Baratin, D.4
Csardi, G.5
de Castro, E.6
Duvaud, S.7
Flegel, V.8
Fortier, A.9
Gasteiger, E.10
Grosdidier, A.11
Hernandez, C.12
Ioannidis, V.13
Kuznetsov, D.14
Liechti, R.15
Moretti, S.16
Mostaguir, K.17
Redaschi, N.18
Rossier, G.19
Xenarios, I.20
Stockinger, H.21
more..
-
18
-
-
0017411710
-
The protein data bank: a computer-based archival file for macromolecular structures
-
10.1016/S0022-2836(77)80200-3, 875032
-
Bernstein FC, Koetzle TF, Williams GJ, Meyer EF, Brice MD, Rodgers JR, Kennard O, Shimanouchi T, Tasumi M. The protein data bank: a computer-based archival file for macromolecular structures. J Mol Biol 1977, 112(3):535-542. 10.1016/S0022-2836(77)80200-3, 875032.
-
(1977)
J Mol Biol
, vol.112
, Issue.3
, pp. 535-542
-
-
Bernstein, F.C.1
Koetzle, T.F.2
Williams, G.J.3
Meyer, E.F.4
Brice, M.D.5
Rodgers, J.R.6
Kennard, O.7
Shimanouchi, T.8
Tasumi, M.9
-
19
-
-
36549003965
-
InterPro and InterProScan: tools for protein sequence classification and comparison
-
10.1007/978-1-59745-515-2_5, 18025686
-
Mulder N, Apweiler R. InterPro and InterProScan: tools for protein sequence classification and comparison. Methods Mol Biol 2007, 396:59-70. 10.1007/978-1-59745-515-2_5, 18025686.
-
(2007)
Methods Mol Biol
, vol.396
, pp. 59-70
-
-
Mulder, N.1
Apweiler, R.2
-
20
-
-
84891757330
-
Gene3D: Multi-domain annotations for protein sequence and comparative genome analysis
-
10.1093/nar/gkt1205, 3965083, 24270792
-
Lees JG, Lee D, Studer RA, Dawson NL, Sillitoe I, Das S, Yeats C, Dessailly BH, Rentzsch R, Orengo CA. Gene3D: Multi-domain annotations for protein sequence and comparative genome analysis. Nucleic Acids Res 2014, 42:D240-D245. [http://dx.doi.org/10.1093/nar/gkt1205], 10.1093/nar/gkt1205, 3965083, 24270792.
-
(2014)
Nucleic Acids Res
, vol.42
-
-
Lees, J.G.1
Lee, D.2
Studer, R.A.3
Dawson, N.L.4
Sillitoe, I.5
Das, S.6
Yeats, C.7
Dessailly, B.H.8
Rentzsch, R.9
Orengo, C.A.10
-
21
-
-
84876586862
-
HAMAP in 2013, new developments in the protein family classification and annotation system
-
3531088, 23193261
-
Pedruzzi I, Rivoire C, Auchincloss AH, Coudert E, Keller G, de Castro E, Baratin D, Cuche BA, Bougueleret L, Poux S, Redaschi N, Xenarios I, Bridge A, Consortium U. HAMAP in 2013, new developments in the protein family classification and annotation system. Nucleic Acids Res 2013, 41(Database issue):D584-D589. 3531088, 23193261.
-
(2013)
Nucleic Acids Res
, vol.41
, Issue.Database issue
-
-
Pedruzzi, I.1
Rivoire, C.2
Auchincloss, A.H.3
Coudert, E.4
Keller, G.5
de Castro, E.6
Baratin, D.7
Cuche, B.A.8
Bougueleret, L.9
Poux, S.10
Redaschi, N.11
Xenarios, I.12
Bridge, A.13
Consortium, U.14
-
22
-
-
84874969184
-
PANTHER in 2013: modeling the evolution of gene function, and other gene attributes, in the context of phylogenetic trees
-
3531194, 23193289
-
Mi H, Muruganujan A, Thomas PD. PANTHER in 2013: modeling the evolution of gene function, and other gene attributes, in the context of phylogenetic trees. Nucleic Acids Res 2013, 41(Database issue):D377-D386. [http://dx.doi.org/10.1093/nar/gks1118], 3531194, 23193289.
-
(2013)
Nucleic Acids Res
, vol.41
, Issue.Database issue
-
-
Mi, H.1
Muruganujan, A.2
Thomas, P.D.3
-
23
-
-
84891782659
-
Pfam: the protein families database
-
10.1093/nar/gkt1223, 3965110, 24288371
-
Finn RD, Bateman A, Clements J, Coggill P, Eberhardt RY, Eddy SR, Heger A, Hetherington K, Holm L, Mistry J, Sonnhammer ELL, Tate J, Punta M. Pfam: the protein families database. Nucleic Acids Res 2014, 42:D222-D230. [http://dx.doi.org/10.1093/nar/gkt1223], 10.1093/nar/gkt1223, 3965110, 24288371.
-
(2014)
Nucleic Acids Res
, vol.42
-
-
Finn, R.D.1
Bateman, A.2
Clements, J.3
Coggill, P.4
Eberhardt, R.Y.5
Eddy, S.R.6
Heger, A.7
Hetherington, K.8
Holm, L.9
Mistry, J.10
Sonnhammer, E.L.L.11
Tate, J.12
Punta, M.13
-
24
-
-
58149187491
-
PIRSF family classification system for protein functional and evolutionary analysis
-
Nikolskaya AN, Arighi CN, Huang H, Barker WC, Wu CH. PIRSF family classification system for protein functional and evolutionary analysis. Evol Bioinform Online 2006, 2:197-209.
-
(2006)
Evol Bioinform Online
, vol.2
, pp. 197-209
-
-
Nikolskaya, A.N.1
Arighi, C.N.2
Huang, H.3
Barker, W.C.4
Wu, C.H.5
-
25
-
-
84862252899
-
The PRINTS database: a fine-grained protein sequence annotation and analysis resource-its status in 2012
-
bas019 3326521, 22508994
-
Attwood TK, Coletta A, Muirhead G, Pavlopoulou A, Philippou PB, Popov I, Romá-Mateo C, Theodosiou A, Mitchell AL. The PRINTS database: a fine-grained protein sequence annotation and analysis resource-its status in 2012. Database (Oxford) 2012, 2012:bas019. [http://dx.doi.org/10.1093/database/bas019], 3326521, 22508994.
-
(2012)
Database (Oxford)
-
-
Attwood, T.K.1
Coletta, A.2
Muirhead, G.3
Pavlopoulou, A.4
Philippou, P.B.5
Popov, I.6
Romá-Mateo, C.7
Theodosiou, A.8
Mitchell, A.L.9
-
26
-
-
13444305296
-
The ProDom database of protein domain families: more emphasis on 3D
-
539988, 15608179
-
Bru C, Courcelle E, CarrÃĺre S, Beausse Y, Dalmar S, Kahn D. The ProDom database of protein domain families: more emphasis on 3D. Nucleic Acids Res 2005, 33(Database issue):D212-D215. [http://dx.doi.org/10.1093/nar/gki034], 539988, 15608179.
-
(2005)
Nucleic Acids Res
, vol.33
, Issue.Database issue
-
-
Bru, C.1
Courcelle, E.2
CarrÃĺre, S.3
Beausse, Y.4
Dalmar, S.5
Kahn, D.6
-
27
-
-
84876588470
-
New and continuing developments at PROSITE
-
10.1093/nar/gks1067, 3531220, 23161676
-
Sigrist CJA, de Castro E, Cerutti L, Cuche BA, Hulo N, Bridge A, Bougueleret L, Xenarios I. New and continuing developments at PROSITE. Nucleic Acids Res 2013, 41(D1):D344-D347. [http://dx.doi.org/10.1093/nar/gks1067], 10.1093/nar/gks1067, 3531220, 23161676.
-
(2013)
Nucleic Acids Res
, vol.41
, Issue.D1
-
-
Sigrist, C.J.A.1
de Castro, E.2
Cerutti, L.3
Cuche, B.A.4
Hulo, N.5
Bridge, A.6
Bougueleret, L.7
Xenarios, I.8
-
28
-
-
84862221167
-
SMART 7: recent updates to the protein domain annotation resource
-
3245027, 22053084
-
Letunic I, Doerks T, Bork P. SMART 7: recent updates to the protein domain annotation resource. Nucleic Acids Res 2012, 40(Database issue):D302-D305. [http://dx.doi.org/10.1093/nar/gkr931], 3245027, 22053084.
-
(2012)
Nucleic Acids Res
, vol.40
, Issue.Database issue
-
-
Letunic, I.1
Doerks, T.2
Bork, P.3
-
29
-
-
0035798406
-
Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure
-
10.1006/jmbi.2001.5080, 11697912
-
Gough J, Karplus K, Hughey R, Chothia C. Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure. J Mol Biol 2001, 313(4):903-919. [http://dx.doi.org/10.1006/jmbi.2001.5080], 10.1006/jmbi.2001.5080, 11697912.
-
(2001)
J Mol Biol
, vol.313
, Issue.4
, pp. 903-919
-
-
Gough, J.1
Karplus, K.2
Hughey, R.3
Chothia, C.4
-
30
-
-
84876134492
-
TIGRFAMs and genome properties in 2013
-
3531188, 23197656
-
Haft DH, Selengut JD, Richter RA, Harkins D, Basu MK, Beck E. TIGRFAMs and genome properties in 2013. Nucleic Acids Res 2013, 41(Database issue):D387-D395. [http://dx.doi.org/10.1093/nar/gks1234], 3531188, 23197656.
-
(2013)
Nucleic Acids Res
, vol.41
, Issue.Database issue
-
-
Haft, D.H.1
Selengut, J.D.2
Richter, R.A.3
Harkins, D.4
Basu, M.K.5
Beck, E.6
-
31
-
-
84891800735
-
The Catalytic Site Atlas 2.0: cataloging catalytic sites and residues identified in enzymes
-
3964973, 24319146
-
Furnham N, Holliday GL, de Beer TAP, Jacobsen JOB, Pearson WR, Thornton JM. The Catalytic Site Atlas 2.0: cataloging catalytic sites and residues identified in enzymes. Nucleic Acids Res 2014, 42(Database issue):D485-D489. [http://dx.doi.org/10.1093/nar/gkt1243], 3964973, 24319146.
-
(2014)
Nucleic Acids Res
, vol.42
, Issue.Database issue
-
-
Furnham, N.1
Holliday, G.L.2
de Beer, T.A.P.3
Jacobsen, J.O.B.4
Pearson, W.R.5
Thornton, J.M.6
-
32
-
-
0141850386
-
An algorithm for constraint-based structural template matching: application to 3D templates with statistical analysis
-
10.1093/bioinformatics/btg226, 12967960
-
Barker JA, Thornton JM. An algorithm for constraint-based structural template matching: application to 3D templates with statistical analysis. Bioinformatics 2003, 19(13):1644-1649. 10.1093/bioinformatics/btg226, 12967960.
-
(2003)
Bioinformatics
, vol.19
, Issue.13
, pp. 1644-1649
-
-
Barker, J.A.1
Thornton, J.M.2
-
33
-
-
22544441094
-
ProFunc: a server for predicting protein function from 3D structure
-
1160175, 15980588
-
Laskowski RA, Watson JD, Thornton JM. ProFunc: a server for predicting protein function from 3D structure. Nucleic Acids Res 2005, 33(Web Server issue):W89-W93. [http://dx.doi.org/10.1093/nar/gki414], 1160175, 15980588.
-
(2005)
Nucleic Acids Res
, vol.33
, Issue.Web Server issue
-
-
Laskowski, R.A.1
Watson, J.D.2
Thornton, J.M.3
-
34
-
-
0034201441
-
EMBOSS: the European molecular biology open software suite
-
10.1016/S0168-9525(00)02024-2, 10827456
-
Rice P, Longden I, Bleasby A. EMBOSS: the European molecular biology open software suite. Trends Genet 2000, 16(6):276-277. 10.1016/S0168-9525(00)02024-2, 10827456.
-
(2000)
Trends Genet
, vol.16
, Issue.6
, pp. 276-277
-
-
Rice, P.1
Longden, I.2
Bleasby, A.3
-
35
-
-
0014757386
-
A general method applicable to the search for similarities in the amino acid sequence of two proteins
-
10.1016/0022-2836(70)90057-4, 5420325
-
Needleman SB, Wunsch CD. A general method applicable to the search for similarities in the amino acid sequence of two proteins. J Mol Biol 1970, 48(3):443-453. [http://www.sciencedirect.com/science/article/pii/0022283670900574], 10.1016/0022-2836(70)90057-4, 5420325.
-
(1970)
J Mol Biol
, vol.48
, Issue.3
, pp. 443-453
-
-
Needleman, S.B.1
Wunsch, C.D.2
-
36
-
-
0025725905
-
Instance-based learning algorithms
-
Aha D, Kibler D. Instance-based learning algorithms. Mach Learn 1991, 6:37-66.
-
(1991)
Mach Learn
, vol.6
, pp. 37-66
-
-
Aha, D.1
Kibler, D.2
-
37
-
-
0035478854
-
Random Forests
-
Breiman L. Random Forests. Mach Learn 2001, 45:5-32.
-
(2001)
Mach Learn
, vol.45
, pp. 5-32
-
-
Breiman, L.1
-
38
-
-
52949105710
-
Multilabel classification via calibrated label ranking
-
Fuernkranz J, Huellermeier E, Loza Mencia E, Brinker K. Multilabel classification via calibrated label ranking. Mach Learn 2008, 73(2):133-153.
-
(2008)
Mach Learn
, vol.73
, Issue.2
, pp. 133-153
-
-
Fuernkranz, J.1
Huellermeier, E.2
Loza Mencia, E.3
Brinker, K.4
-
39
-
-
84898942883
-
Classification by pairwise coupling
-
Cambridge, Massachusetts: MIT Press
-
Hastie T, Tibshirani R. Classification by pairwise coupling. Advances in Neural Information Processing Systems, Volume 10. Edited by Jordan MI, Kearns MJ, Solla SA 1998, Cambridge, Massachusetts: MIT Press.
-
(1998)
Advances in Neural Information Processing Systems, Volume 10. Edited by Jordan MI, Kearns MJ, Solla SA
-
-
Hastie, T.1
Tibshirani, R.2
-
40
-
-
0027580356
-
Very simple classification rules perform well on most commonly used datasets
-
Holte RC. Very simple classification rules perform well on most commonly used datasets. Mach Learn 1993, 11:63-90.
-
(1993)
Mach Learn
, vol.11
, pp. 63-90
-
-
Holte, R.C.1
-
42
-
-
0000545946
-
Improvements to Platt's SMO Algorithm for SVM classifier design
-
Keerthi SS, Shevade SK, Bhattacharyya C, Murthy KRK. Improvements to Platt's SMO Algorithm for SVM classifier design. Neural Comput 2001, 13(3):637-649. [http://dx.doi.org/10.1162/089976601300014493].
-
(2001)
Neural Comput
, vol.13
, Issue.3
, pp. 637-649
-
-
Keerthi, S.S.1
Shevade, S.K.2
Bhattacharyya, C.3
Murthy, K.R.K.4
-
43
-
-
0003120218
-
Fast training of support vector machines using sequential minimal optimization
-
Cambridge, Massachusetts: MIT Press
-
Platt J. Fast training of support vector machines using sequential minimal optimization. Advances in Kernel Methods - Support Vector Learning. Edited by Schoelkopf B, Burges C, Smola A 1998, Cambridge, Massachusetts: MIT Press, [http://research.microsoft.com/en-us/um/people/jplatt/smo-book.pdf].
-
(1998)
Advances in Kernel Methods - Support Vector Learning. Edited by Schoelkopf B, Burges C, Smola A
-
-
Platt, J.1
-
45
-
-
55349142147
-
An empirical study of lazy multilabel classification algorithms
-
Berlin Heidelberg: Springer
-
Spyromitros E, Tsoumakas G, Vlahavas I. An empirical study of lazy multilabel classification algorithms. Artificial Intelligence: Theories, Models and Applications 2008, 401-406. Berlin Heidelberg: Springer, [http://dx.doi.org/10.1007/978-3-540-87881-0_40].
-
(2008)
Artificial Intelligence: Theories, Models and Applications
, pp. 401-406
-
-
Spyromitros, E.1
Tsoumakas, G.2
Vlahavas, I.3
-
48
-
-
80052236046
-
MULAN: A Java Library for Multi-Label Learning
-
Tsoumakas G, Spyromitros-Xioufis E, Vilcek J, Vlahavas I. MULAN: A Java Library for Multi-Label Learning. J Mach Learn Res 2011, 12(Jul):2411-2414.
-
(2011)
J Mach Learn Res
, vol.12
, Issue.Jul
, pp. 2411-2414
-
-
Tsoumakas, G.1
Spyromitros-Xioufis, E.2
Vilcek, J.3
Vlahavas, I.4
-
49
-
-
52949089060
-
Random k -Labelsets: an ensemble method for multilabel classification
-
Tsoumakas G, Vlahavas I. Random k -Labelsets: an ensemble method for multilabel classification. 2007, [http://citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1.97.5044&rep=rep1&type=pdf].
-
(2007)
-
-
Tsoumakas, G.1
Vlahavas, I.2
-
51
-
-
33748366796
-
Multilabel neural networks with applications to functional genomics and text categorization
-
Zhang ML, Zhou ZH. Multilabel neural networks with applications to functional genomics and text categorization. Knowl Data Eng IEEE Trans on 2006, 18(10):1338-1351.
-
(2006)
Knowl Data Eng IEEE Trans on
, vol.18
, Issue.10
, pp. 1338-1351
-
-
Zhang, M.L.1
Zhou, Z.H.2
-
52
-
-
84980090975
-
The distribution of the flora in the alpine zone 1
-
Jaccard P. The distribution of the flora in the alpine zone 1. New Phytologist 1912, 11(2):37-50. [http://dx.doi.org/10.1111/j.1469-8137.1912.tb05611.x].
-
(1912)
New Phytologist
, vol.11
, Issue.2
, pp. 37-50
-
-
Jaccard, P.1
-
53
-
-
84862290466
-
Multiclass-multilabel classification with more classes than examples
-
Chia Laguna Resort, Sardinia, Italy,
-
Dekel O, Shamir O. Multiclass-multilabel classification with more classes than examples. Proceedings of the 13 th International Conference on Artificial Intelligence and Statistics (AISTATS) 2010. Volume 9 of JMLR: W&CP 2010, 137-144. Chia Laguna Resort, Sardinia, Italy, [http://machinelearning.wustl.edu/mlpapers/paper_files/AISTATS2010_DekelS10.pdf].
-
(2010)
Proceedings of the 13 th International Conference on Artificial Intelligence and Statistics (AISTATS) 2010. Volume 9 of JMLR: W&CP
, pp. 137-144
-
-
Dekel, O.1
Shamir, O.2
-
54
-
-
65649138430
-
A systematic analysis of performance measures for classification tasks
-
Sokolova M, Lapalme G. A systematic analysis of performance measures for classification tasks. Inf Process Manag 2009, 45(4):427-437. [http://www.sciencedirect.com/science/article/pii/S0306457309000259].
-
(2009)
Inf Process Manag
, vol.45
, Issue.4
, pp. 427-437
-
-
Sokolova, M.1
Lapalme, G.2
-
55
-
-
0022833822
-
Primary structures of canine pancreatic lipase and phospholipase A2 messenger RNAs
-
10.1097/00006676-198609000-00007, 3562437
-
Kerfelec B, LaForge KS, Puigserver A, Scheele G. Primary structures of canine pancreatic lipase and phospholipase A2 messenger RNAs. Pancreas 1986, 1(5):430-437. 10.1097/00006676-198609000-00007, 3562437.
-
(1986)
Pancreas
, vol.1
, Issue.5
, pp. 430-437
-
-
Kerfelec, B.1
LaForge, K.S.2
Puigserver, A.3
Scheele, G.4
-
56
-
-
0024333252
-
Structure of the canine pancreatic lipase gene
-
Mickel FS, Weidenbach F, Swarovsky B, LaForge KS, Scheele GA. Structure of the canine pancreatic lipase gene. J Biol Chem 1989, 264(22):12895-12901.
-
(1989)
J Biol Chem
, vol.264
, Issue.22
, pp. 12895-12901
-
-
Mickel, F.S.1
Weidenbach, F.2
Swarovsky, B.3
LaForge, K.S.4
Scheele, G.A.5
-
57
-
-
0031873787
-
Reactivation of the totally inactive pancreatic lipase RP1 by structure-predicted point mutations
-
10.1002/(SICI)1097-0134(19980901)32:4<523::AID-PROT10>3.0.CO;2-E, 9726421
-
Roussel A, de Caro J, Bezzine S, Gastinel L, de Caro A, Carrière F, Leydier S, Verger R, Cambillau C. Reactivation of the totally inactive pancreatic lipase RP1 by structure-predicted point mutations. Proteins 1998, 32(4):523-531. 10.1002/(SICI)1097-0134(19980901)32:4<523::AID-PROT10>3.0.CO;2-E, 9726421.
-
(1998)
Proteins
, vol.32
, Issue.4
, pp. 523-531
-
-
Roussel, A.1
de Caro, J.2
Bezzine, S.3
Gastinel, L.4
de Caro, A.5
Carrière, F.6
Leydier, S.7
Verger, R.8
Cambillau, C.9
-
58
-
-
1542714925
-
Mismatch string kernels for discriminative protein classification
-
10.1093/bioinformatics/btg431, 14990442
-
Leslie CS, Eskin E, Cohen A, Weston J, Noble WS. Mismatch string kernels for discriminative protein classification. Bioinformatics 2004, 20(4):467-476. [http://bioinformatics.oxfordjournals.org/content/20/4/467.abstract], 10.1093/bioinformatics/btg431, 14990442.
-
(2004)
Bioinformatics
, vol.20
, Issue.4
, pp. 467-476
-
-
Leslie, C.S.1
Eskin, E.2
Cohen, A.3
Weston, J.4
Noble, W.S.5
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