Reaction of wild-type and Glu243Asp variant yeast cytochrome c oxidase with O2

Biochimica et Biophysica Acta - Bioenergetics

Volumn 1837, Issue 7, 2014, Pages 1012-1018

  Näsvik Öjemyr, Linda ^a   Maréchal, Amandine ^b   Vestin, Henrik ^a   Meunier, Brigitte ^c   Rich, Peter R ^b   Brzezinski, Peter ^a  

^a STOCKHOLM UNIVERSITY   (Sweden)

^b UNIVERSITY COLLEGE LONDON   (United Kingdom)

^c CNRS   (France)

Author keywords

Electron transfer; Membrane protein; Metalloprotein; Redox reaction; Respiration

Indexed keywords

ASPARTIC ACID; CYTOCHROME C OXIDASE; FUNGAL ENZYME; GLUTAMIC ACID; HEME; OXYGEN;

AMINO ACID SUBSTITUTION; ARTICLE; ELECTRON TRANSPORT; EQUILIBRIUM CONSTANT; NONHUMAN; OXIDATION; PRIORITY JOURNAL; YEAST;

BOVINAE; RHODOBACTER SPHAEROIDES; SACCHAROMYCES CEREVISIAE;

CYTOCHROME AA(3); ELECTRON TRANSFER; MEMBRANE PROTEIN; METALLOPROTEIN; REDOX REACTION; RESPIRATION;

AMINO ACID SEQUENCE; ELECTRON TRANSPORT; ELECTRON TRANSPORT COMPLEX IV; MOLECULAR SEQUENCE DATA; MUTATION, MISSENSE; OXIDATION-REDUCTION; OXYGEN; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS;

EID: 84901856495     PISSN: 00052728     EISSN: 18792650     Source Type: Journal    
DOI: 10.1016/j.bbabio.2014.03.012     Document Type: Article

References (46)

1. J. Hemp, and R.B. Gennis Diversity of the heme-copper superfamily in archaea: insights from genomics and structural modeling Results Probl. Cell Differ. 45 2008 1 31
2. M.M. Pereira, M. Santana, and M. Teixeira A novel scenario for the evolution of haem-copper oxygen reductases Biochim. Biophys. Acta, Bioenerg. 1505 2001 185 208 (Pubitemid 32378771)
3. J.P. Hosler, S. Ferguson-Miller, and D.A. Mills Energy transduction: proton transfer through the respiratory complexes Annu. Rev. Biochem. 75 2006 165 187 (Pubitemid 44118030)
4. S. Yoshikawa, K. Muramoto, K. Shinzawa-Itoh, H. Aoyama, T. Tsukihara, K. Shimokata, Y. Katayama, and H. Shimada Proton pumping mechanism of bovine heart cytochrome c oxidase Biochim. Biophys. Acta Bioenerg. 1757 2006 1110 1116 (Pubitemid 44442134)
5. M. Wikström, and M.I. Verkhovsky Towards the mechanism of proton pumping by the haem-copper oxidases Biochim. Biophys. Acta Bioenerg. 1757 2006 1047 1051 (Pubitemid 44427754)
6. A. Namslauer, and P. Brzezinski Structural elements involved in electron-coupled proton transfer in cytochrome c oxidase FEBS Lett. 567 2004 103 110 (Pubitemid 38686431)
7. P. Brzezinski, and R.B. Gennis Cytochrome c oxidase: exciting progress and remaining mysteries J. Bioenerg. Biomembr. 40 2008 521 531
8. P. Brzezinski, and P. Ädelroth Design principles of proton-pumping haem-copper oxidases Curr. Opin. Struct. Biol. 16 2006 465 472 (Pubitemid 44149073)
9. O.M.H. Richter, and B. Ludwig Electron transfer and energy transduction in the terminal part of the respiratory chain - lessons from bacterial model systems Biochim. Biophys. Acta Bioenerg. 1787 2009 626 634
10. I. Belevich, and M.I. Verkhovsky Molecular mechanism of proton translocation by cytochrome c oxidase Antioxid. Redox Signal. 10 2008 1 29 (Pubitemid 350115984)
11. S. Ferguson-Miller, C. Hiser, and J. Liu Gating and regulation of the cytochrome c oxidase proton pump Biochim. Biophys. Acta Bioenerg. 1817 2012 489 494
12. P.R. Rich, and A. Maréchal Functions of the hydrophilic channels in protonmotive cytochrome c oxidase J. R. Soc. Interface 10 2013
13. A. Maréchal, B. Meunier, D. Lee, C. Orengo, and P.R. Rich Yeast cytochrome c oxidase: a model system to study mitochondrial forms of the haem-copper oxidase superfamily Biochim. Biophys. Acta Bioenerg. 1817 2012 620 628
14. B. Meunier, A. Maréchal, and P.R. Rich Construction of histidine-tagged yeast mitochondrial cytochrome c oxidase for facile purification of mutant forms Biochem. J. 444 2012 199 204
15. S. Yoshikawa, K. Muramoto, and K. Shinzawa-Itoh Proton-pumping mechanism of cytochrome c oxidase Annu. Rev. Biophys. Biomol. Struct. 40 2011 205 223
16. 2 reduction and proton pumping gate mechanism of bovine heart cytochrome c oxidase Biochim. Biophys. Acta Bioenerg. 1807 2011 1279 1286
17. S. Yoshikawa, K. Muramoto, K. Shinzawa-Itoh, and M. Mochizuki Structural studies on bovine heart cytochrome c oxidase Biochim. Biophys. Acta Bioenerg. 1817 2012 579 589
18. H.M. Lee, T.K. Das, D.L. Rousseau, D. Mills, S. Ferguson-Miller, and R.B. Gennis Mutations in the putative H-channel in the cytochrome c oxidase from Rhodobacter sphaeroides show that this channel is not important for proton conduction but reveal modulation of the properties of heme a Biochemistry 39 2000 2989 2996 (Pubitemid 30159404)
19. J. Salje, B. Ludwig, and O.M. Richter Is a third proton-conducting pathway operative in bacterial cytochrome c oxidase? Biochem. Soc. Trans. 33 2005 829 831 (Pubitemid 41160873)
20. Ó. Einarsdóttir Fast reactions of cytochrome-oxidase Biochim. Biophys. Acta 1229 1995 129 147
21. V.R.I. Kaila, M.I. Verkhovsky, and M. Wikström Proton-coupled electron transfer in cytochrome oxidase Chem. Rev. 110 2010 7062 7081
22. P. Brzezinski, L.N. Öjemyr, and P. Ädelroth Intermediates generated during the reaction of reduced Rhodobacter sphaeroides cytochrome c oxidase with dioxygen Biochim. Biophys. Acta Bioenerg. 1827 2013 843 847
23. K. Faxén, G. Gilderson, P. Ädelroth, and P. Brzezinski A mechanistic principle for proton pumping by cytochrome c oxidase Nature 437 2005 286 289 (Pubitemid 41294494)
24. M.I. Verkhovsky, J.E. Morgan, M.L. Verkhovskaya, and M. Wikström Translocation of electrical charge during a single turnover of cytochrome-c oxidase Biochim. Biophys. Acta 1318 1997 6 10 (Pubitemid 27051220)
25. P. Ädelroth, M. Svensson Ek, D.M. Mitchell, R.B. Gennis, and P. Brzezinski Glutamate 286 in cytochrome aa3 from Rhodobacter sphaeroides is involved in proton uptake during the reaction of the fully-reduced enzyme with dioxygen Biochemistry 36 1997 13824 13829 (Pubitemid 27494888)
26. E.A. Gorbikova, I. Belevich, M. Wikström, and M.I. Verkhovsky The proton donor for OO bond scission by cytochrome c oxidase Proc. Natl. Acad. Sci. U. S. A. 105 2008 10733 10737
27. I.A. Smirnova, P. Ädelroth, R.B. Gennis, and P. Brzezinski Aspartate-132 in cytochrome c oxidase from Rhodobacter sphaeroides is involved in a two-step proton transfer during oxo-ferryl formation Biochemistry 38 1999 6826 6833
28. P. Ädelroth, M. Karpefors, G. Gilderson, F.L. Tomson, R.B. Gennis, and P. Brzezinski Proton transfer from glutamate 286 determines the transition rates between oxygen intermediates in cytochrome c oxidase Biochim. Biophys. Acta 1459 2000 533 539 (Pubitemid 30612430)
29. 3) from Paracoccus denitrificans: analysis of mutations in putative proton channels of subunit I J. Bioenerg. Biomembr. 30 1998 89 97 (Pubitemid 28262412)
30. M.L. Verkhovskaya, A. García-Horsman, A. Puustinen, J.L. Rigaud, J.E. Morgan, M.I. Verkhovsky, and M. Wikström Glutamic acid 286 in subunit I of cytochrome bo3 is involved in proton translocation Proc. Natl. Acad. Sci. U. S. A. 94 1997 10128 10131 (Pubitemid 27407005)
31. M. Karpefors, P. Ädelroth, and P. Brzezinski The onset of the deuterium isotope effect in cytochrome c oxidase Biochemistry 39 2000 5045 5050 (Pubitemid 30241624)
32. M. Karpefors, P. Ädelroth, A. Aagaard, I.A. Smirnova, and P. Brzezinski The deuterium isotope effect as a tool to investigate enzyme catalysis: proton-transfer control mechanisms in cytochrome c oxidase Isr. J. Chem. 39 1999 427 437
33. P. Ädelroth, M. Ek, and P. Brzezinski Factors determining electron-transfer rates in cytochrome c oxidase: investigation of the oxygen reaction in the R. sphaeroides and bovine enzymes Biochim. Biophys. Acta 1367 1998 107 117 (Pubitemid 28451587)
34. A. Namslauer, A. Aagaard, A. Katsonouri, and P. Brzezinski Intramolecular proton-transfer reactions in a membrane-bound proton pump: the effect of pH on the peroxy to ferryl transition in cytochrome c oxidase Biochemistry 42 2003 1488 1498 (Pubitemid 36205955)
35. S. Hallén, and T. Nilsson Proton transfer during the reaction between fully reduced cytochrome c oxidase and dioxygen: pH and deuterium isotope effects Biochemistry 31 1992 11853 11859
36. S.A. Siletsky, A.S. Pawate, K. Weiss, R.B. Gennis, and A.A. Konstantinov Transmembrane charge separation during the ferryl-oxo- > oxidized transition in a nonpumping mutant of cytochrome c oxidase J. Biol. Chem. 279 2004 52558 52565 (Pubitemid 39656632)
37. M. Karpefors, P. Ädelroth, and P. Brzezinski Localized control of proton transfer through the D-pathway in cytochrome c oxidase: application of the proton-inventory technique Biochemistry 39 2000 6850 6856 (Pubitemid 30390377)
38. Ó. Einarsdóttir, and I. Szundi Time-resolved optical absorption studies of cytochrome oxidase dynamics Biochim. Biophys. Acta Bioenerg. 1655 2004 263 273 (Pubitemid 38526189)
39. P. Brzezinski, and P. Ädelroth Pathways of proton transfer in cytochrome c oxidase J. Bioenerg. Biomembr. 30 1998 99 107 (Pubitemid 28262413)
40. A. Namslauer, A.S. Pawate, R.B. Gennis, and P. Brzezinski Redox-coupled proton translocation in biological systems: proton shuttling in cytochrome c oxidase Proc. Natl. Acad. Sci. U. S. A. 100 2003 15543 15547 (Pubitemid 38021026)
41. D. Bloch, I. Belevich, A. Jasaitis, C. Ribacka, A. Puustinen, M.I. Verkhovsky, and M. Wikström The catalytic cycle of cytochrome c oxidase is not the sum of its two halves Proc. Natl. Acad. Sci. U. S. A. 101 2004 529 533 (Pubitemid 38084670)
42. S. Paula, A. Sucheta, I. Szundi, and Ó. Einarsdóttir Proton and electron transfer during the reduction of molecular oxygen by fully reduced cytochrome c oxidase: a flow-flash investigation using optical multichannel detection Biochemistry 38 1999 3025 3033 (Pubitemid 29131809)
43. L. Salomonsson, K. Faxén, P. Ädelroth, and P. Brzezinski The timing of proton migration in membrane-reconstituted cytochrome c oxidase Proc. Natl. Acad. Sci. U. S. A. 102 2005 17624 17629 (Pubitemid 41803547)
44. M. Karpefors, P. Ädelroth, Y. Zhen, S. Ferguson-Miller, and P. Brzezinski Proton uptake controls electron transfer in cytochrome c oxidase Proc. Natl. Acad. Sci. U. S. A. 95 1998 13606 13611 (Pubitemid 28523019)
45. L. Salomonsson, G. Brändén, and P. Brzezinski Deuterium isotope effect of proton pumping in cytochrome c oxidase Biochim. Biophys. Acta Bioenerg. 1777 2008 343 350 (Pubitemid 351417725)
46. D. Zaslavsky, R.C. Sadoski, K. Wang, B. Durham, R.B. Gennis, and F. Millett Single electron reduction of cytochrome c oxidase compound F: resolution of partial steps by transient spectroscopy Biochemistry 37 1998 14910 14916 (Pubitemid 28487600)