The relationship between mixed microbial culture composition and PHA production performance from fermented molasses

New Biotechnology

Volumn 31, Issue 4, 2014, Pages 257-263

  Carvalho, Gilda ^a,b   Oehmen, Adrian ^a   Albuquerque, Maria G E ^a   Reis, Maria A M ^a  

^a DEPARTAMENTO DE QUÍMICA   (Portugal)

^b IBET   (Portugal)

Author keywords

[No Author keywords available]

Indexed keywords

MECHANICAL PROPERTIES;

INDUSTRIAL WASTEWATERS; MICROBIAL COMMUNITIES; MICROBIAL STRUCTURES; MIXED MICROBIAL CULTURE; OPERATIONAL CHANGES; ORGANIC LOADING RATES; POLYHYDROXYALKANOATES; PROCESS PERFORMANCE;

LOADING;

MOLASSES; POLYHYDROXYALKANOIC ACID; PROPIONIC ACID; VALERIC ACID; VALERIC ACID DERIVATIVE;

ARTICLE; AZOARCUS; BACTERIUM CULTURE; BIOMASS; BIOMASS PRODUCTION; CARBON SOURCE; CONTINUOUS STIRRED TANK REACTOR; DECARBOXYLATION; DENATURING GRADIENT GEL ELECTROPHORESIS; ENERGY RESOURCE; FERMENTATION; FLUORESCENCE IN SITU HYBRIDIZATION; HUNGER; METABOLIC FLUX ANALYSIS; MICROBIAL COMMUNITY; MICROBIAL DIVERSITY; MICROBIOLOGICAL PHENOMENA AND FUNCTIONS; MIXED MICROBIAL CULTURE; NONHUMAN; NUTRIENT LIMITATION; PARACOCCUS; POPULATION ABUNDANCE; POPULATION STRUCTURE; PRIORITY JOURNAL; SEQUENCING BATCH REACTOR; THAUERA; BACTERIA; BATCH CELL CULTURE; BIOREACTOR; BIOSYNTHESIS; METABOLISM; MICROBIOLOGY;

AZOARCUS; THAUERA;

BACTERIA; BATCH CELL CULTURE TECHNIQUES; BIOMASS; BIOREACTORS; DENATURING GRADIENT GEL ELECTROPHORESIS; FERMENTATION; IN SITU HYBRIDIZATION, FLUORESCENCE; MOLASSES; POLYHYDROXYALKANOATES; VALERATES;

EID: 84901666415     PISSN: 18716784     EISSN: 18764347     Source Type: Journal    
DOI: 10.1016/j.nbt.2013.08.010     Document Type: Article

References (31)

1. Albuquerque M.G.E., Eiroa M., Torres C., Nunes B.R., Reis M.A.M. Strategies for the development of a side stream process for polyhydroxyalkanoate (PHA) production from sugar cane molasses. J Biotechnol 2007, 130:411-421.
2. Albuquerque M.G.E., Torres C.A.V., Reis M.A.M. Polyhydroxyalkanoate (PHA) production by a mixed microbial culture using sugar molasses: effect of the influent substrate concentration on culture selection. Water Res 2010, 44:3419-3433.
3. Albuquerque M.G.E., Martino V., Pollet E., Averous L., Reis M.A.M. Mixed culture polyhydroxyalkanoate (PHA) production from volatile fatty acid (VFA)-rich streams: effect of substrate composition and feeding regime on PHA productivity, composition and properties. J Biotechnol 2011, 151:66-76.
4. Bengtsson S., Werker A., Christensson M., Welander T. Production of polyhydroxyalkanoates by activated sludge treating a paper mill wastewater. Bioresource Technol 2008, 99:509-516.
5. Jiang Y., Marang L., Tamis J., van Loosdrecht M.C.M., Dijkman H., Kleerebezem R. Waste to resource: converting paper mill wastewater to bioplastic. Water Res 2012, 46:5517-5530.
6. Dionisi D., Carucci G., Papini M.P., Riccardi C., Majone M., Carrasco F. Olive oil mill effluents as a feedstock for production of biodegradable polymers. Water Res 2005, 39:2076-2084.
7. Beccari M., Bertin L., Dionisi D., Fava F., Lampis S., Majone M., et al. Exploiting olive oil mill effluents as a renewable resource for production of biodegradable polymers through a combined anaerobic-aerobic process. J Chem Technol Biot 2009, 84:901-908.
8. Moralejo-Garate H., Mar'atusalihat E., Kleerebezem R., van Loosdrecht M.C.M. Microbial community engineering for biopolymer production from glycerol. Appl Microbiol Biotechnol 2011, 92:631-639.
9. Dobroth Z.T., Hu S., Coats E.R., Mcdonald A.G. Polyhydroxybutyrate synthesis on biodiesel wastewater using mixed microbial consortia. Bioresour Technol 2011, 102:3352-3359.
10. Reis M.A.M., Albuquerque M.G.E., Villano M., Majone M. Mixed culture processes for polyhydroxyalkanoate production from agro-industrial surplus/wastes as feedstocks. Comprehensive Biotechnology 2011, vol. 6:669-683. Elsevier.
11. Dias J., Oehmen A., Serafim L.S., Lemos P.C., Reis M.A.M., Oliveira R. Metabolic modelling of polyhydroxyalkanoate copolymers production by mixed microbial cultures. BMC Syst Biol 2008, 2:59.
12. Dionisi D., Majone M., Vallini G., Di Gregorio S., Beccari M. Effect of the applied organic load rate on biodegradable polymer production by mixed microbial cultures in a sequencing batch reactor. Biotechnol Bioeng 2006, 93:76-88.
13. Lemos P.C., Levantesi C., Serafim L.S., Rossetti S., Reis M.A.M., Tandoi V. Microbial characterisation of polyhydroxyalkanoates storing populations selected under different operating conditions using a cell-sorting RT-PCR approach. Appl Microbiol Biotechnol 2008, 78:351-360.
14. Villano M., Beccari M., Dionisi D., Lampis S., Miccheli A., Vallini G., et al. Effect of pH on the production of bacterial polyhydroxyalkanoates by mixed cultures enriched under periodic feeding. Process Biochem 2010, 45:714-723.
15. Albuquerque M.G.E., Carvalho G., Kragelund C., Silva A.F., Barreto-Crespo M.T., Reis M.A.M., et al. Link between microbial composition and carbon substrate-uptake preferences in a PHA-storing community. ISME J 2013, 7:1-12. 10.1038/ismej.2012.74.
16. APHA, AWWA, WPCF Standard Methods for the Examination of Water and Wastewater 1995, Port City Press, Baltimore.
17. Amann R.I. In situ identification of microorganisms by whole cell hybridization with rRNA-targeted nucleic acid probes. Molecular Microbial Ecology Manual 1995, vol. 3.3.6:1-15. Kluwer Academic Publications, Dordrecht, Holland.
18. Amann R.I., Binder B.J., Olson R.J., Chisholm S.W., Devereux R., Stahl D.A. Combination of 16S ribosomal-RNA-targeted oligonucleotide probes with flow-cytometry for analyzing mixed microbial-populations. Appl Environ Microbiol 1990, 56:1919-1925.
19. Daims H., Bruhl A., Amann R., Schleifer K.H., Wagner M. The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: development and evaluation of a more comprehensive probe set. Syst Appl Microbiol 1999, 22:434-444.
20. Hess A., Zarda B., Hahn D., Haner A., Stax D., Hohener P., et al. In situ analysis of denitrifying toluene- and m-xylene-degrading bacteria in a diesel fuel-contaminated laboratory aquifer column. Appl Environ Microbiol 1997, 63:2136-2141.
21. Loy A., Schulz C., Lucker S., Schopfer-Wendels A., Stoecker K., Baranyi C., et al. 16S rRNA gene-based oligonucleotide microarray for environmental monitoring of the betaproteobacterial order "Rhodocyclales". Appl Environ Microbiol 2005, 71:1373-1386.
22. Neef A., Zaglauer A., Meier H., Amann R., Lemmer H., Schleifer K.H. Population analysis in a denitrifying sand filter: conventional and in situ identification of Paracoccus spp. in methanol-fed biofilms. Appl Environ Microbiol 1996, 62:4329-4339.
23. Daims H., Lucker S., Wagner M. Daime, a novel image analysis program for microbial ecology and biofilm research. Environ Microbiol 2006, 8:200-213.
24. Edwards U., Rogall T., Blocker H., Emde M., Bottger E.C. Isolation and direct complete nucleotide determination of entire genes - characterization of a gene coding for 16s-ribosomal Rna. Nucleic Acids Res 1989, 17:7843-7853.
25. Weisburg W.G., Barns S.M., Pelletier D.A., Lane D.J. 16S ribosomal DNA amplification for phylogenetic study. J Bacteriol 1991, 173:697-703.
26. Muyzer G., Hottentrager S., Teske A., Wawer C. Denaturing gradient gel electrophoresis of PCR-amplified 16S rDNA, a new molecular approach to analyse genetic diversity of mixed microbial communities. Molecular Microbial Ecology Manual 1995, Kluwer Academic Publishers, Dordrecht, NL, pp. 3.4.4.1-3.4.4.22. A.D.L. Akkermans, J.D. van Elsas, F.J. de Brujin (Eds.).
27. Lane D.J. 16S/23S rRNA sequencing. Nucleic Acid Techniques in Bacterial Systematics 1991, 115-175. Wiley, Chichester, UK. E. Stackebrandt, M. Goodfellow (Eds.).
28. Marzorati M., Wittebolle L., Boon N., Daffonchio D., Verstraete W. How to get more out of molecular fingerprints: practical tools for microbial ecology. Environ Microbiol 2008, 10:1571-1581.
29. Ostle A.G., Holt J.G. Nile blue A as a fluorescent stain for poly-ß-hydroxybutyrate. App Environ Microbiol 1982, 44:238-324.
30. Pardelha F., Albuquerque M.G.E., Reis M.A.M., Dias J.M.L., Oliveira R. Flux balance analysis of mixed microbial cultures: application to the production of polyhydroxyalkanoates from complex mixtures of volatile fatty acids. J Biotechnol 2012, 162:336-345.
31. Pardelha F., Albuquerque M.G.E., Carvalho G., Reis M.A.M., Dias J.M.L., Oliveira R. Segregated flux balance analysis constrained by population structure/function data: the case of PHA production by mixed microbial cultures. Biotechnol Bioeng 2013, 110:2267-2276.