Predominance of norovirus and sapovirus in nicaragua after implementation of universal rotavirus vaccination

PLoS ONE

Volumn 9, Issue 5, 2014, Pages

  Bucardo, Filemón ^a   Reyes, Yaoska ^a   Svensson, Lennart ^b   Nordgren, Johan ^b  

^a National Autonomous University of Nicaragua   (Nicaragua)

^b LINKÖPING UNIVERSITY   (Sweden)

Author keywords

[No Author keywords available]

Indexed keywords

ROTAVIRUS VACCINE; LIVE VACCINE;

ACUTE DIARRHEA; ARTICLE; CHILD; DEHYDRATION; DISEASE SEVERITY; FEMALE; GENE FREQUENCY; GENE SEQUENCE; GENETIC VARIABILITY; GENOTYPE; HUMAN; INFANT; INFECTION RATE; MAJOR CLINICAL STUDY; MALE; MASS IMMUNIZATION; MIXED INFECTION; NICARAGUA; NOROVIRUS INFECTION; NUCLEOTIDE SEQUENCE; PRESCHOOL CHILD; RNA VIRUS INFECTION; ROTAVIRUS INFECTION; SAPOVIRUS INFECTION; CALICIVIRIDAE INFECTIONS; FECES; GASTROENTERITIS; HEALTH CENTER; HOSPITAL; ISOLATION AND PURIFICATION; NEWBORN; NOROVIRUS; PREVENTIVE HEALTH SERVICE; REAL TIME POLYMERASE CHAIN REACTION; ROTAVIRUS; ROTAVIRUS INFECTIONS; SAPOVIRUS; VIROLOGY;

CALICIVIRIDAE INFECTIONS; CHILD; CHILD, PRESCHOOL; COMMUNITY HEALTH CENTERS; FECES; FEMALE; GASTROENTERITIS; GENETIC VARIATION; GENOTYPE; HOSPITALS; HUMANS; IMMUNIZATION PROGRAMS; INFANT; INFANT, NEWBORN; MALE; NICARAGUA; NOROVIRUS; REAL-TIME POLYMERASE CHAIN REACTION; ROTAVIRUS; ROTAVIRUS INFECTIONS; ROTAVIRUS VACCINES; SAPOVIRUS; VACCINES, ATTENUATED;

EID: 84901373405     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0098201     Document Type: Article

References (44)

1. Patel MM, Widdowson MA, Glass RI, Akazawa K, Vinje J, et al. (2008) Systematic literature review of role of noroviruses in sporadic gastroenteritis. Emerg Infect Dis 14: 1224-1231.
2. Parashar UD, Gibson CJ, Bresse JS, Glass RI (2006) Rotavirus and severe childhood diarrhea. Emerg Infect Dis 12: 304-306.
3. Tate JE, Burton AH, Boschi-Pinto C, Steele AD, Duque J, et al. (2012) 2008 estimate of worldwide rotavirus-associated mortality in children younger than 5 years before the introduction of universal rotavirus vaccination programmes: a systematic review and meta-analysis. Lancet Infect Dis 12: 136-141.
4. Johnsen CK, Midgley S, Bottiger B (2009) Genetic diversity of sapovirus infections in Danish children 2005-2007. J Clin Virol 46: 265-269.
5. Khamrin P, Maneekarn N, Peerakome S, Tonusin S, Malasao R, et al. (2007) Genetic diversity of noroviruses and sapoviruses in children hospitalized with acute gastroenteritis in Chiang Mai, Thailand. J Med Virol 79: 1921-1926. (Pubitemid 350006319)
6. Podkolzin AT, Fenske EB, Abramycheva NY, Shipulin GA, Sagalova OI, et al. (2009) Hospital-based surveillance of rotavirus and other viral agents of diarrhea in children and adults in Russia, 2005-2007. J Infect Dis 200 Suppl 1: S228-233.
7. Sakai Y, Nakata S, Honma S, Tatsumi M, Numata-Kinoshita K, et al. (2001) Clinical severity of Norwalk virus and Sapporo virus gastroenteritis in children in Hokkaido, Japan. Pediatr Infect Dis J 20: 849-853. (Pubitemid 32880318)
8. Bucardo F, Carlsson B, Nordgren J, Larson G, Blandon P, et al. (2012) Susceptibility of children to sapovirus infections, Nicaragua, 2005-2006. Emerg Infect Dis 18: 1875-1878.
9. Soares-Weiser K, Maclehose H, Bergman H, Ben-Aharon I, Nagpal S, et al. (2012) Vaccines for preventing rotavirus diarrhoea: vaccines in use. Cochrane Database Syst Rev 11: CD008521.
10. Vesikari T, Karvonen A, Ferrante SA, Ciarlet M (2010) Efficacy of the pentavalent rotavirus vaccine, RotaTeq(R), in Finnish infants up to 3 years of age: the Finnish Extension Study. Eur J Pediatr 169: 1379-1386.
11. Khawaja S, Cardellino A, Klotz D, Kuter BJ, Feinberg MB, et al. (2012) Evaluating the health impact of a public-private partnership: to reduce rotavirus disease in Nicaragua. Hum Vaccin Immunother 8: 777-782.
12. Patel M, Pedreira C, De Oliveira LH, Tate J, Orozco M, et al. (2009) Association between pentavalent rotavirus vaccine and severe rotavirus diarrhea among children in Nicaragua. JAMA 301: 2243-2251.
13. Vesikari T, Matson DO, Dennehy P, Van Damme P, Santosham M, et al. (2006) Safety and efficacy of a pentavalent human-bovine (WC3) reassortant rotavirus vaccine. N Engl J Med 354: 23-33. (Pubitemid 43048948)
14. Zaman K, Dang DA, Victor JC, Shin S, Yunus M, et al. (2010) Efficacy of pentavalent rotavirus vaccine against severe rotavirus gastroenteritis in infants in developing countries in Asia: a randomised, double-blind, placebo-controlled trial. Lancet 376: 615-623.
15. Madhi SA, Cunliffe NA, Steele D, Witte D, Kirsten M, et al. (2010) Effect of human rotavirus vaccine on severe diarrhea in African infants. N Engl J Med 362: 289-298.
16. Becker-Dreps S, Paniagua M, Zambrana LE, Bucardo F, Hudgens MG, et al. (2011) Rotavirus prevalence in the primary care setting in Nicaragua after universal infant rotavirus immunization. Am J Trop Med Hyg 85: 957-960.
17. Becker-Dreps S, Paniagua M, Dominik R, Cao H, Shah NK, et al. (2011) Changes in childhood diarrhea incidence in nicaragua following 3 years of universal infant rotavirus immunization. Pediatr Infect Dis J 30: 243-247.
18. Becker-Dreps S, Melendez M, Liu L, Zambrana LE, Paniagua M, et al. (2013) Community diarrhea incidence before and after rotavirus vaccine introduction in Nicaragua. Am J Trop Med Hyg 89: 246-250.
19. Pang XL, Koskenniemi E, Joensuu J, Vesikari T (1999) Effect of rhesus rotavirus vaccine on enteric adenovirus-associated diarrhea in children. J Pediatr Gastroenterol Nutr 29: 366-369. (Pubitemid 30366153)
20. Pang XL, Zeng SQ, Honma S, Nakata S, Vesikari T (2001) Effect of rotavirus vaccine on Sapporo virus gastroenteritis in Finnish infants. Pediatr Infect Dis J 20: 295-300. (Pubitemid 32240270)
21. Zeng SQ, Halkosalo A, Salminen M, Szakal ED, Karvonen A, et al. (2010) Norovirus gastroenteritis in young children receiving human rotavirus vaccine. Scand J Infect Dis 42: 540-544.
22. Bucardo F, Nordgren J, Carlsson B, Paniagua M, Lindgren PE, et al. (2008) Pediatric norovirus diarrhea in Nicaragua. J Clin Microbiol 46: 2573-2580.
23. Iturriza-Gomara M, Kang G, Gray J (2004) Rotavirus genotyping: keeping up with an evolving population of human rotaviruses. J Clin Virol 31: 259-265. (Pubitemid 39371057)
24. Samajdar S, Varghese V, Barman P, Ghosh S, Mitra U, et al. (2006) Changing pattern of human group A rotaviruses: emergence of G12 as an important pathogen among children in eastern India. J Clin Virol 36: 183-188. (Pubitemid 43890928)
25. Gentsch JR, Glass RI, Woods P, Gouvea V, Gorziglia M, et al. (1992) Identification of group A rotavirus gene 4 types by polymerase chain reaction. J Clin Microbiol 30: 1365-1373.
26. Bucardo F, Rippinger CM, Svensson L, Patton JT (2012) Vaccine-derived NSP2 segment in rotaviruses from vaccinated children with gastroenteritis in Nicaragua. Infect Genet Evol 12: 1282-1294.
27. Nordgren J, Bucardo F, Dienus O, Svensson L, Lindgren PE (2008) Novel light-upon-extension real-time PCR assays for detection and quantification of genogroup I and II noroviruses in clinical specimens. J Clin Microbiol 46: 164-170.
28. Kojima S, Kageyama T, Fukushi S, Hoshino FB, Shinohara M, et al. (2002) Genogroup-specific PCR primers for detection of Norwalk-like viruses. J Virol Methods 100: 107-114. (Pubitemid 34003629)
29. Kimura M (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16: 111-120.
30. Zheng DP, Ando T, Fankhauser RL, Beard RS, Glass RI, et al. (2006) Norovirus classification and proposed strain nomenclature. Virology 346: 312-323. (Pubitemid 43357875)
31. Chan MC, Sung JJ, Lam RK, Chan PK, Lai RW, et al. (2006) Sapovirus detection by quantitative real-time RT-PCR in clinical stool specimens. J Virol Methods 134: 146-153.
32. Okada M, Yamashita Y, Oseto M, Shinozaki K (2006) The detection of human sapoviruses with universal and genogroup-specific primers. Arch Virol 151: 2503-2509. (Pubitemid 44819344)
33. Bucardo F, Lindgren PE, Svensson L, Nordgren J (2011) Low prevalence of rotavirus and high prevalence of norovirus in hospital and community wastewater after introduction of rotavirus vaccine in Nicaragua. PLoS One 6: e25962.
34. Payne DC, Vinje J, Szilagyi PG, Edwards KM, Staat MA, et al. (2013) Norovirus and medically attended gastroenteritis in U.S. children. N Engl J Med 368: 1121-1130.
35. Hemming M, Rasanen S, Huhti L, Paloniemi M, Salminen M, et al. (2013) Major reduction of rotavirus, but not norovirus, gastroenteritis in children seen in hospital after the introduction of RotaTeq vaccine into the National Immunization Programme in Finland. Eur J Pediatr 172: 739-746.
36. Koo HL, Neill FH, Estes MK, Munoz FM, Cameron A, et al. (2013) Noroviruses: The Most Common Pediatric Viral Enteric Pathogen at a Large University Hospital After Introduction of Rotavirus Vaccination. J Pediatric Infect Dis Soc 2: 57-60.
37. Tam CC, O'Brien SJ, Tompkins DS, Bolton FJ, Berry L, et al. (2012) Changes in causes of acute gastroenteritis in the United Kingdom over 15 years: microbiologic findings from 2 prospective, population-based studies of infectious intestinal disease. Clin Infect Dis 54: 1275-1286.
38. Simpson R, Aliyu S, Iturriza-Gomara M, Desselberger U, Gray J (2003) Infantile viral gastroenteritis: on the way to closing the diagnostic gap. J Med Virol 70: 258-262. (Pubitemid 36520635)
39. Desai R, Hembree CD, Handel A, Matthews JE, Dickey BW, et al. (2012) Severe outcomes are associated with genogroup 2 genotype 4 norovirus outbreaks: a systematic literature review. Clin Infect Dis 55: 189-193.
40. Glass RI, Parashar UD, EstesMK(2009) Norovirus gastroenteritis. N Engl J Med 361: 1776-1785.
41. Bucardo F, Nordgren J, Carlsson B, Kindberg E, Paniagua M, et al. (2010) Asymptomatic norovirus infections in Nicaraguan children and its association with viral properties and histo-blood group antigens. Pediatr Infect Dis J 29: 934-939.
42. Moreno-Espinosa S, Farkas T, Jiang X (2004) Human caliciviruses and pediatric gastroenteritis. Semin Pediatr Infect Dis 15: 237-245. (Pubitemid 39371104)
43. Vinje J, Deijl H, van der Heide R, Lewis D, Hedlund KO, et al. (2000) Molecular detection and epidemiology of Sapporo-like viruses. J Clin Microbiol 38: 530-536. (Pubitemid 30082636)
44. Hu L, Crawford SE, Czako R, Cortes-Penfield NW, Smith DF, et al. (2012) Cell attachment protein VP8*of a human rotavirus specifically interacts with A-type histo-blood group antigen. Nature 485: 256-259.