The fate of chromosomes and alleles in an allohexaploid Brassica population

Genetics

Volumn 197, Issue 1, 2014, Pages 273-283

  Mason, Annaliese S ^a   Nelson, Matthew N ^b   Takahira, Junko ^b   Cowling, Wallace A ^b   Alves, Gustavo Moreira ^a,c   Chaudhuri, Arkaprava ^a,d   Chen, Ning ^a   Ragu, Mohana E ^a   Dalton Morgan, Jessica ^a   Coriton, Olivier ^e   Huteau, Virginie ^e   Eber, Frédérique ^e   Chèvre, Anne Marie ^e   Batley, Jacqueline ^a  

^a UNIVERSITY OF QUEENSLAND   (Australia)

^b UNIVERSITY OF WESTERN AUSTRALIA   (Australia)

^c FEDERAL UNIVERSITY OF MINAS GERAIS   (Brazil)

^d NATIONAL INSTITUTE OF TECHNOLOGY   (India)

^e Universite Rennes 1   (France)

Author keywords

[No Author keywords available]

Indexed keywords

ALLELE; ARTICLE; BRASSICA; CABBAGE; CHROMOSOME DOUBLING; CHROMOSOME LOSS; CHROMOSOME NUMBER; CHROMOSOME PAIRING; DNA CONTENT; FLOW CYTOMETRY; GENE SEGREGATION; GENOMIC INSTABILITY; GENOTYPE; IN SITU HYBRIDIZATION; KARYOTYPE; KARYOTYPING; MUSTARD; NONHUMAN; PLANT CHROMOSOME; PLANT GENETICS; PLANT GENOME; POLLEN; PRIORITY JOURNAL; PROGENY; SELFING; SINGLE NUCLEOTIDE POLYMORPHISM; CYTOLOGY; DRUG EFFECTS; FERTILITY; FLUORESCENCE IN SITU HYBRIDIZATION; GENETICS; HYBRIDIZATION; MEIOSIS; PHYSIOLOGY; POLYPLOIDY;

COLCHICINE; PLANT DNA;

ALLELES; BRASSICA; CHROMOSOMES, PLANT; COLCHICINE; DNA, PLANT; FERTILITY; GENOME, PLANT; HYBRIDIZATION, GENETIC; IN SITU HYBRIDIZATION, FLUORESCENCE; KARYOTYPING; MEIOSIS; POLYMORPHISM, SINGLE NUCLEOTIDE; POLYPLOIDY;

EID: 84901293995     PISSN: 00166731     EISSN: 19432631     Source Type: Journal    
DOI: 10.1534/genetics.113.159574     Document Type: Article

References (49)

1. Arumugam, N., A. Mukhopadhyay, V. Gupta, D. Pental, and A. K. Pradhan, 1996 Synthesis of hexaploid (AABBCC) somatic hybrids: a bridging material for transfer of "tour" cytoplasmic male sterility to different Brassica species. Theor. Appl. Genet. 92: 762-768.
2. Catcheside, D. G., 1934 The chromosomal relationships in the swede and turnip groups of Brassica. Ann. Bot. (Lond.) 48: 601-633.
3. Chen, S., M. N. Nelson, A. M. Chèvre, E. Jenczewski, Z. Li et al., 2011 Trigenomic bridges for Brassica improvement. Crit. Rev. Plant Sci. 30: 524-547.
4. Cousin, A., K. Heel, W. A. Cowling, and M. N. Nelson, 2009 An efficient high-throughput flow cytometric method for estimating DNA ploidy level in plants. Cytometry A 75: 1015-1019.
5. D'Erfurth, I., S. Jolivet, N. Froger, O. Catrice, M. Novatchkova et al., 2008 Mutations in AtPS1 (Arabidopsis thaliana parallel spindle 1) lead to the production of diploid pollen grains. PLoS Genet. 4: e1000274.
6. De Storme, N., and D. Geelen, 2011 The Arabidopsis mutant jason produces unreduced first division restitution male gametes through a parallel/fused spindle mechanism in meiosis II. Plant Physiol. 155: 1403-1415.
7. De Storme, N., and D. Geelen, 2013 Sexual polyploidization in plants: cytological mechanisms and molecular regulation. New Phytol. 198: 670-684.
8. D'Hont, A., 2005 Unraveling the genome structure of polyploids using FISH and GISH: examples of sugarcane and banana. Cytogenet. Genome Res. 109: 27-33.
9. Dixon, G. R., 2007 Vegetable Brassicas and related crucifers, pp. 1:33 in Crop Production Science in Horticulture Series, edited by J. Atherton, and H. Rees. CAB International, Oxfordshire, UK.
10. Fulton, T. M., J. Chunwongse, and S. D. Tanksley, 1995 Microprep protocol for extraction of DNA from tomato and other herbaceous plants. Plant Mol. Biol. Rep. 13: 207-209.
11. Geng, X. X., S. Chen, I. A. Astarini, G. J. Yan, E. Tian et al., 2013 Doubled haploids of novel trigenomic Brassica derived from various interspecific crosses. Plant Cell Tiss Org 113: 501-511.
12. Heneen, W. K., M. Geleta, K. Brismar, Z. Y. Xiong, J. C. Pires et al., 2012 Seed colour loci, homoeology and linkage groups of the C genome chromosomes revealed in Brassica rapa-B. oleracea monosomic alien addition lines. Ann. Bot. (Lond.) 109: 1227-1242.
13. Howard, H. W., 1942 The effect of polyploidy and hybridity on seed size in crosses between Brassica chinensis, B. carinata, amphidiploid B. chinensis-carinata and autotetraploid B. chinensis. J. Genet. 43: 105-119.
14. Howell, E. C., G. Barker, G. H. Jones, M. J. Kearsey, G. King et al., 2002 Integration of the cytogenetic and genetic linkage maps of Brassica oleracea. Genetics 161: 1225-1234.
15. Iwasa, S., 1964 Cytogenetic studies on the artificially raised trigenomic hexaploid hybrid forms in the genus Brassica. J. Faculty of Agriculture, Kyushu University 13: 309-352.
16. Jellen, E. N., B. S. Gill, and T. S. Cox, 1994 Genomic in-situ hybridization differentiates between A/D-genome and C-genome chromatin and detects intergenomic translocations in polyploid oat species (genus Avena). Genome 37: 613-618.
17. Jenczewski, E., F. Eber, A. Grimaud, S. Huet, M. O. Lucas et al., 2003 PrBn, a major gene controlling homeologous pairing in oilseed rape (Brassica napus) haploids. Genetics 164: 645-653.
18. Leflon, M., F. Eber, J. C. Letanneur, L. Chelysheva, O. Coriton et al., 2006 Pairing and recombination at meiosis of Brassica rapa (AA) 3 Brassica napus (AACC) hybrids. Theor. Appl. Genet. 113: 1467-1480.
19. Leitch, A. R., and I. J. Leitch, 2008 Genomic plasticity and the diversity of polyploid plants. Science 320: 481-483.
20. Li, M., W. Qian, J. Meng, and Z. Li, 2004 Construction of novel Brassica napus genotypes through chromosomal substitution and elimination using interploid species hybridization. Chromosome Res. 12: 417-426.
21. Liu, Z., K. Adamczyk, M. Manzanares-Dauleux, F. Eber, M.-O. Lucas et al., 2006 Mapping PrBn and other quantitative trait loci responsible for the control of homeologous chromosome pairing in oilseed rape (Brassica napus L.) haploids. Genetics 174: 1583-1596.
22. Mason, A. S., V. Huteau, F. Eber, O. Coriton, G. Yan et al., 2010 Genome structure affects the rate of autosyndesis and allosyndesis in AABC, BBAC and CCAB Brassica interspecific hybrids. Chromosome Res. 18: 655-666.
23. Mason, A. S., M. N. Nelson, G. J. Yan, and W. A. Cowling, 2011 Production of viable male unreduced gametes in Brassica interspecific hybrids is genotype specific and stimulated by cold temperatures. BMC Plant Biol. 11: 103.
24. Mason, A. S., G. Yan, W. A. Cowling, and M. N. Nelson, 2012 A new method for producing allohexaploid Brassica through unreduced gametes. Euphytica 186: 277-287.
25. Mason, A. S., J. Batley, P. E. Bayer, A. Hayward, W. A. Cowling et al., 2014 High-resolution molecular karyotyping uncovers pairing between ancestrally-related Brassica chromosomes. New Phytol. DOI: 10.1111/nph.12706.
26. Meng, J., S. Shi, L. Gan, Z. Li, and X. Qu, 1998 The production of yellow-seeded Brassica napus (AACC) through crossing interspecific hybrids of B. campestris (AA) and B. carinata (BBCC) with B. napus. Euphytica 103: 329-333.
27. 1 hybrids of B. juncea and B. nigra. Cytologia (Tokyo) 6: 62-67.
28. Nelson, M. N., A. S. Mason, M.-C. Castello, L. Thomson, G. Yan et al., 2009 Microspore culture preferentially selects unreduced (2n) gametes from an interspecific hybrid of Brassica napus L. 3 Brassica carinata Braun. Theor. Appl. Genet. 119: 497-505.
29. Nicolas, S. D., M. Leflon, H. Monod, F. Eber, O. Coriton et al., 2009 Genetic regulation of meiotic cross-overs between related genomes in Brassica napus haploids and hybrids. Plant Cell 21: 373-385.
30. Nicolas, S. D., H. Monod, F. Eber, A. M. Chevre, and E. Jenczewski, 2012 Non-random distribution of extensive chromosome rearrangements in Brassica napus depends on genome organization. Plant J. 70: 691-703.
31. Osborn, T. C., D. V. Butrulle, A. G. Sharpe, K. J. Pickering, I. P. Parkin et al., 2003 Detection and effects of a homeologous reciprocal transposition in Brassica napus. Genetics 165: 1569-1577.
32. Otto, S. P., and J. Whitton, 2000 Polyploid incidence and evolution. Annu. Rev. Genet. 34: 401-437.
33. Pradhan, A., J. A. Plummer, M. N. Nelson, W. A. Cowling, and G. Yan, 2010 Successful induction of trigenomic hexaploid Brassica from a triploid hybrid of B. napus L. and B. nigra (L.) Koch. Euphytica 176: 87-98.
34. Prakash, S., 1974 Probable basis of diploidization of Brassica juncea Coss. Can. J. Genet. Cytol. 16: 232-234.
35. Rahman, M. H., 2001 Production of yellow-seeded Brassica napus through interspecific crosses. Plant Breed. 120: 463-472.
36. Roberts, A. V., 2007 The use of bead beating to prepare suspensions of nuclei for flow cytometry from fresh leaves, herbarium leaves, petals and pollen. Cytometry A 71: 1039-1044.
37. Sjödin, C., and K. Glimelius, 1989 Brassica naponigra, a somatic hybrid resistant to Phoma lingam. Theor. Appl. Genet. 77: 651-656.
38. Song, K. M., P. Lu, K. L. Tang, and T. C. Osborn, 1995 Rapid genome change in synthetic polyploids of Brassica and its implications for polyploid evolution. Proc. Natl. Acad. Sci. USA 92: 7719-7723.
39. Suay, L., D. Zhang, F. Eber, H. Jouy, M. Lodé et al., 2014 Crossover rate between homologous chromosomes and interference are regulated by the addition of specific unpaired chromosomes in Brassica. New Phytol. 201: 645-656.
40. Szadkowski, E., F. Eber, V. Huteau, M. Lodé, C. Huneau et al., 2010 The first meiosis of resynthesized Brassica napus, a genome blender. New Phytol. 186: 102-112.
41. Tavoletti, S., A. Mariani, and F. Veronesi, 1991 Phenotypic recurrent selection for 2n pollen and 2n egg production in diploid alfalfa. Euphytica 57: 97-102.
42. Tian, E., Y. Jiang, L. Chen, J. Zou, F. Liu et al., 2010 Synthesis of a Brassica trigenomic allohexaploid (B. carinata 3 B. rapa) de novo and its stability in subsequent generations. Theor. Appl. Genet. 121: 1431-1440.
43. U. N., 1935 Genome-analysis in Brassica with special reference to the experimental formation of B. napus and peculiar mode of fertilization. Jap. J. Bot. 7: 389-452.
44. Wang, J., D. J. Lydiate, I. P. Parkin, C. Falentin, R. Delourme et al., 2011 Integration of linkage maps for the amphidiploid Brassica napus and comparative mapping with Arabidopsis and Brassica rapa. BMC Genomics 12: 101.
45. Wang, X. W., H. Z. Wang, J. Wang, R. F. Sun, J. Wu et al., 2011 The genome of the mesopolyploid crop species Brassica rapa. Nat. Genet. 43: 1035-1039.
46. Xiong, Z. Y., R. T. Gaeta, and J. C. Pires, 2011 Homoeologous shuffling and chromosome compensation maintain genome balance in resynthesized allopolyploid Brassica napus. Proc. Natl. Acad. Sci. USA 108: 7908-7913.
47. Zonneveld, B. J. M., I. J. Leitch, and M. D. Bennett, 2005 First nuclear DNA amounts in more than 300 angiosperms. Ann. Bot. (Lond.) 96: 229-244.
48. Zou, J., J. Zhu, S. Huang, E. Tian, Y. Xiao et al., 2010 Broadening the avenue of intersubgenomic heterosis in oilseed Brassica. Theor. Appl. Genet. 120: 283-290.
49. Zou, J., D. H. Fu, H. H. Gong, W. Qian, W. Xia et al., 2011 De novo genetic variation associated with retrotransposon activation, genomic rearrangements and trait variation in a recombinant inbred line population of Brassica napus derived from interspecific hybridization with Brassica rapa. Plant J. 68: 212-224.