Detection of genome DNA methylation change in spinach induced by 5-azaC

Molecular and Cellular Probes

Volumn 28, Issue 4, 2014, Pages 163-166

  Gao, Wujun ^a,b   Li, Shufen ^a,b   Li, Zhongxia ^a   Huang, Yingying ^a   Deng, Chuanliang ^a,b   Lu, Longdou ^a,b  

^a HENAN NORMAL UNIVERSITY   (China)

^b Data Mining of Universities of Henan Province   (China)

Author keywords

5 azaC; DNA methylation; HPLC; MS ISSR; Spinach

Indexed keywords

AZACITIDINE; CYTOSINE; GENOMIC DNA; NUCLEOSIDE;

ARTICLE; CONTROLLED STUDY; DIOECY; DNA METHYLATION; FEMALE PLANT; GENE EXPRESSION; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; MALE PLANT; NONHUMAN; PRIORITY JOURNAL; SEX DETERMINATION; SPINACH; DOSE RESPONSE; DRUG EFFECTS; GENE EXPRESSION REGULATION; GENETICS; PLANT GENOME; PLANT LEAF;

EUKARYOTA; SPINACIA OLERACEA;

AZACITIDINE; CHROMATOGRAPHY, HIGH PRESSURE LIQUID; DNA METHYLATION; DOSE-RESPONSE RELATIONSHIP, DRUG; GENE EXPRESSION REGULATION, PLANT; GENOME, PLANT; NUCLEOSIDES; PLANT LEAVES; SPINACIA OLERACEA;

EID: 84901259602     PISSN: 08908508     EISSN: 10961194     Source Type: Journal    
DOI: 10.1016/j.mcp.2014.02.002     Document Type: Article

References (29)

1. Janousěk B., Široký J., Vyskot B. Epigenetic control of sexual phenotype in a dioecious plant, Melandrium album. Mol Gen Genet 1996, 250:483-490.
2. Tariq M., Paszkowski J. DNA and histone methylation in plants. Trends Genet 2005, 20:244-251.
3. Rangwala S.H., Richards E.J. The value-added genome: building and maintaining genomic cytosine methylation landscapes. Curr Opin Genet Dev 2004, 14:686-691.
4. Chan S.W., Henderson I.R., Jacobsen S.E. Gardening the genome: DNA methylation in Arabidopsis thaliana. Nat Rev Genet 2005, 6:351-360.
5. Peng H., Zhang J. Plant genomic DNA methylation in response to stresses: potential applications and challenges in plant breeding. Prog Nat Sci 2009, 19:1037-1045.
6. Sánchez-Abarca L., Gutierrez-Cosio S., Santamaría C., Caballero-Velazquea T., Blanco B., Herrero-Sánchez C., et al. Immunomodulatory effect of 5-azacytidine (5-azaC): potential role in the transplantation setting. Blood 2010, 115:107-121.
7. Sano H., Kamada I., Youssefian S., Katsumi M., Wabiko H.A. Single treatment of rice seedlings with 5-azacytidine induces heritable dwarfism and undermethylation of genomic DNA. Mol Gen Genet 1990, 220:441-447.
8. Bezdek M., Koukalova B., Brzobahaty B., Vyskot B. 5-Azacytidine-induced hypomethylation of tobacco HRS60 tandem DNA repeats in tissue culture. Planta 1991, 184:487-490.
9. King G.K. Morphological development in Brassica oleracea is modulated by invivo treatment with 5-azacytidine. JHort Sci 1995, 79:333-342.
10. Fieldes M.A., Schaeffer S.M., Krech M.J., Brown J.C. DNA hypomethylation in 5-azacytidine-induced early-flowering lines of flax. Theor Appl Genet 2005, 111:136-149.
11. Zhong L., Xu Y.H., Wang J.B. The effect of 5-azacytidine on wheat seedlings responses to NaCl stress. Biol Plant 2010, 54:753-756.
12. Eun C.H., Takagi K., Park K.I., Maekawa M., Iida S., Tsugane K. Activation and epigenetic regulation of DNA transposon nDart1 in rice. Plant Cell Physiol 2012, 53:857-868.
13. Fieldes M.A., Amyot L.M. Epigenetic control of early flowering in flax lines induced by 5-azacytidine applied to germinating seed. JHered 1999, 90:199-206.
14. Fieldes M.A., Harvey C.G. Differences in developmental programming and node number at flowering in the 5-azacytidine-induced, early-flowering flax lines and their controls. Int J Plant Sci 2004, 165:695-706.
15. Kondo H., Miura T., Wada K.C., Takeno K. Induction of flowering by 5-azacytidine in some plant species: relationship between the stability of photoperiodically induced flowering and flower-inducing effect of DNA demethylation. Physiol Plant 2007, 131:462-469.
16. Doyle J.J., Doyle J.L. Arapid isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull 1987, 19:11-15.
17. Chakrabarty D., Yu K.W., Paek K.Y. Detection of DNA methylation changes during somatic embryogenesis of Siberian ginseng (Eleuterococcus senticosus). Plant Sci 2003, 165:61-68.
18. Kondo H., Shiraya T., Wads K.C., Takeno K. Induction of flowering by DNA demethylation in Perilla frutescens and Silene armeria: heritability of 5-azacytidine-induced effects and alteration of DNA methylation state by photoperiodic conditions. Plant Sci 2010, 178:321-326.
19. Horváth E., Szalai G., Janda T., Páldi E., Rácz I., Lásztity D. Effect of vernalisation and 5-azacytidine on the methylation level of DNA in wheat (Triticum aestivum L., cv. Martonvásár 15). Plant Sci 2003, 165:689-692.
20. Zhong L., Xu Y., Wang J. DNA-methylation changes induced by salt stress in wheat Triticum aestivum. Afr J Biotechnol 2009, 8:6201-6207.
21. Pan Y., Wang W., Zhao X., Zhu L., Fu B., Li Z. DNA methylation alterations of rice in response to cold stress. Plant Omics 2011, 4:364-369.
22. Shen S., Wang Z., Shan X., Wang H., Li L., Lin X., et al. Alterations in DNA methylation and genome structure in two rice mutant lines induced by high pressure. Sci China Ser C 2006, 49:97-104.
23. Prakash A.P., Kumar P.P. Inhibition of shoot induction by 5-azacytidine and 5-aza-2'-deoxycytidine in Petunia involves DNA hypomethylation. Plant Cell Rep 1997, 16:719-724.
24. Linacero R., Rueda J., Esquivel E., Bellido A., Domingo A., Vázquez A.M. Genetic and epigenetic relationship in rye, Secale cereal L., somaclonal variation within somatic embryo-derived plants. Vitro Cell Dev Pl 2011, 47:618-628.
25. Echeverria S.P., Valencia V.A.H., Kay A.J. Detection of DNA methylation changes in micropropagated banana plants using methylation sensitive amplification polymorphism (MSAP). Plant Sci 2001, 161:359-367.
26. El-Maarri O., Becker T., Junen J., Manzoor S.S., Diaz-Lacava A., Schwaab R., et al. Gender specific differences in levels of DNA methylation at selected loci from human total blood: a tendency toward higher methylation levels in males. Hum Genet 2007, 122:505-514.
27. Boks M.P., Derks E.M., Weisenberger D.J., Strengman E., Janson E., Sommer I.E., et al. The relationship of DNA methylation with age, gender and genotype in twins and healthy controls. PLos One 2009, 4:e6767.
28. Zhang W., Wang X., Yu Q., Ming R., Jiang J. DNA methylation and heterochromatinization in the male-specific region of the primitive Y chromosome of papaya. Genome Res 2008, 18:1938-1943.
29. Siroky J., Castiglinoe M.R., Vyskot B. DNA methylation patterns of Melandrium album chromosomes. Chromosome Res 1998, 6:441-446.