Boundary influences on HAB phytoplankton ecology in a stratification-enhanced upwelling shadow

Deep-Sea Research Part II: Topical Studies in Oceanography

Volumn 101, Issue , 2014, Pages 63-79

  Ryan, J P ^a   McManus, M A ^b   Kudela, R M ^c   Lara Artigas, M ^d   Bellingham, J G ^a   Chavez, F P ^a   Doucette, G ^e   Foley, D ^f   Godin, M ^a   Harvey, J B J ^a   Marin, R ^a   Messie M ^a   Mikulski, C ^e   Pennington, T ^a   Py, F ^a   Rajan, K ^a   Shulman, I ^g   Wang, Z ^e   Zhang, Y ^a  

^a MONTEREY BAY AQUARIUM RESEARCH INSTITUTE   (United States)

^b UNIVERSITY OF HAWAII   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

^d INSTITUT DE CIÈNCIES DEL MAR   (Spain)

^e CENTER FOR COASTAL ENVIRONMENTAL HEALTH AND BIOMOLECULAR RESEARCH   (United States)

^f NOAA SOUTHWEST FISHERIES SCIENCE CENTER   (United States)

^g NAVAL RESEARCH LABORATORY   (United States)

Author keywords

Algal blooms; Coastal oceanography; Coastal upwelling; Molecular biology

Indexed keywords

ALGAL BLOOMS; BOTTOM BOUNDARY LAYER; COASTAL MARINE ECOSYSTEMS; COASTAL OCEANOGRAPHY; COASTAL UPWELLING; HIGH-RESOLUTION MAPPING; LAGRANGIAN FRAMEWORKS; PHYTOPLANKTON COMMUNITY;

ANALYTIC EQUIPMENT; AUTONOMOUS UNDERWATER VEHICLES; ECOLOGY; MOLECULAR BIOLOGY; BOUNDARY LAYERS; ECOSYSTEMS;

PHYTOPLANKTON;

ALGAL BLOOM; BOUNDARY CURRENT; BOUNDARY LAYER; COASTAL ZONE; COMMUNITY DYNAMICS; COMMUNITY RESPONSE; DIATOM; DINOFLAGELLATE; MARINE ECOSYSTEM; MOLECULAR ANALYSIS; OCEANIC CIRCULATION; PHYTOPLANKTON; STRATIFICATION; TOXICITY; UPWELLING; WIND FORCING;

CALIFORNIA; MONTEREY BAY; UNITED STATES;

ALEXANDRIUM CATENELLA; ALGAE; BACILLARIOPHYTA; DINOPHYCEAE; HETEROSIGMA AKASHIWO; PSEUDO-NITZSCHIA; RAPHIDOPHYCEAE;

EID: 84900593129     PISSN: 09670645     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.dsr2.2013.01.017     Document Type: Article

References (73)

1. Bellingham J.G., Streitlien K., Overland J., Rajan S., Stein P., Stannard J., Kirkwood W., Yoerger D. An Arctic basin observational capability using AUVs. Oceanography 2000, 13:64-71.
2. Bellingham, J.G., Zhang, Y., Kerwin, J.E., Erikson, J., Hobson, B., Kieft, B., Godin, M., McEwen, R., Hoover, T., Paul, J., Hamilton, A., Franklin, J., Banka, A., 2010. Efficient propulsion for the Tethys long-range autonomous underwater vehicle. In: Proceedings of IEEE AUV 2010 Monterey, CA, September 2010, pp. 1-6.
3. Bird, L.E., Sherman, A.D., Ryan, J.P., 2007. Development of an active, large volume, discrete seawater sampler for autonomous underwater vehicles, Proceedings of the Oceans MTS/IEEE, Vancouver, Canada, pp. 1-5.
4. Bravo I., Fraga.S., Figueroa R.I., Pazos Y., Massanet A., Ramilo I. Bloom dynamics and life cycle strategies of two toxic dinoflagellates in a coastal upwelling system (NW Iberian Peninsula). Deep-Sea Res. II 2010, 57:222-234. 10.1016/j.dsr2.2009.09.004.
5. Breaker L.C., Broenkow W.W. The circulation of Monterey Bay and related processes. Oceanogr. Mar. Biol.: Annu. Rev. 1994, 32:1-64.
6. Cazenave F., Zhang Y., McPhee-Shaw E., Bellingham J.G., Stanton T.P. High-resolution surveys of internal tidal waves in Monterey Bay, California, using an autonomous underwater vehicle. Limnol. Oceanogr.: Methods 2011, 9:571-581. 10.4319/lom.2011.9.571.
7. Cullen J.J., Eppley R.W. Chlorophyll maximum layers of the Southern California Bight and possible mechanisms of their formation and maintenance. Oceanol. Acta 1981, 4:23-32.
8. Curtiss C.C., Langlois G.W., Busse L.B., Mazzillo F., Silver M.W. The emergence of Cochlodinium along the California Coast (USA). Harmful Algae 2008, 7:337-346.
9. Das J., Py F., Maughan T., O'Reilly T., Messie M., Ryan J., Sukhatme G., Rajan K. Coordinated sampling of dynamic oceanographic features with underwater vehicles and drifters. Int. J. Robot. Res. 2012, 31:626-646. 10.1177/0278364912440736.
10. Doucette G.J., Mikulski C.M., Jones K.L., King K.L., Greenfield D.I., Marin R., Jensen S., Elliott C.T., Scholin C.A. Remote, subsurface detection of the algal toxin domoic acid onboard the environmental sample processor: assay development and field trials. Harmful Algae 2009, 8:880-888.
11. Doyle J.D., Jiang Q., Chao Y., Farrara J. High-resolution real-time modeling of the marine atmospheric boundary layer in support of the AOSN-II field campaign. Deep Sea Res. Part II 2009, 56:87-99.
12. Fawcett A., Pitcher G., Bernard S., Cembella A., Kudela R. Contrasting wind patterns and toxigenic phytoplankton in the southern Benguela upwelling system. Mar. Ecol. Prog. Ser. 2007, 348:19-31.
13. Fitzwater S.E., Johnson K.S., Elrod V.A., Ryan J.P., Coletti L.J., Tanner S.J., Gordon R.M., Chavez F.P. Iron, nutrient and phytoplankton biomass relationships in upwelled waters of the California coastal system. Cont Shelf Res. 2003, 23:1523-1544.
14. GEOHAB Global Ecology and Oceanography of Harmful Algal Blooms, GEOHAB Core Research Project: HABs in Stratified Systems 2008, 59. IOC and SCOR, Paris, France, and Newark, Delaware, USA. P. Gentien, B. Reguera, H. Yamazaki, L. Fernand, E. Berdalet, R. Raine (Eds.).
15. Godin, M., Zhang, Y., Ryan, J.P., Hoover, T., Bellingham, J.G., 2011. Phytoplankton bloom patch center localization by the Tethys autonomous underwater vehicle. In: Proceedings of the MTS/IEEE Oceans'11, Kona, HI, USA, September 2011, pp.1-6.
16. Gower J., King S., Borstad G., Brown L. Detection of intense plankton blooms using the 709nm band of the MERIS imaging spectrometer. Int. J. Remote Sensing 2005, 26:2005-2012.
17. Graham W.M., Field J.G., Potts D.C. Persistent 'upwelling shadows' and their influence on zooplankton distributions. Mar.Biol. 1992, 114:561-570.
18. Graham W.M., Largier J.L. Upwelling shadows as nearshore retention sites: the example of northern Monterey Bay. Cont. Shelf Res. 1997, 17:509-532.
19. Greenfield D.I., Marin R., Doucette G.J., Mikulski C.M., Jones K.L., Jensen S., Roman B., Alvarado N., Feldman J., Scholin C.A. Field applications of the second-generation environmental sample processor (ESP) for remote detection of harmful algae: 2006-2007. Limnol. Oceanogr.: Methods 2008, 6:667-679.
20. Harvey, J.B.J., Ryan, J.P., Marin III, R., Preston, C.M., Alvarado, N., Scholin, C.A., Vrijenhoek, R.C., 2012. Robotic sampling, in situ monitoring and molecular detection of marine zooplankton. J. Exp. Mar. Biol. Ecol. 413, 60-70.
21. Holm-Hansen O., Amos A.F., Hewes C.D. Reliability of estimating chlorophyll a concentrations in Antarctic waters by measurement of in situ chlorophyll a fluorescence. Mar. Ecol. Prog. Ser. 2000, 196:103-110.
22. Howard M., Ladizinsky N., Cochlan W., Kudela R. Nitrogenous preference of toxigenic Pseudo-nitzschia australis (Bacillariophyceae) from field and laboratory experiments. Harmful Algae 2007, 6:206-217.
23. IOC, SCOR, IAPSO, 2010. The International Thermodynamic Equation of Seawater - 2010: Calculation and Use of Thermodynamic Properties. Intergovernmental Oceanographic Commission, Manuals and Guides No. 56, UNESCO (English), 196 pp.
24. Jessup D.A., Miller M.A., Ryan J.P., Nevins H.M., Kerkering H.A., Mekebri A., Crane D.B., Johnson T.A., Kudela R.M. Mass stranding of marine birds caused by a surfactant-producing red tide. PLoS ONE 2009, 4:e4550. 10.1371/journal.pone.0004550.
25. Johnson K.S., Needoba J.A. Mapping the spatial variability of plankton metabolism using nitrate and oxygen sensors on an autonomous underwater vehicle. Limnol. Oceanogr. 2008, 53:2237-2250.
26. Johnson K.S., Chavez F.P., Friederich G.E. Continental-shelf sediment as a primary source of iron for coastal phytoplankton. Nature 1999, 398(6729):697-700.
27. Kahru M., Mitchell B.G., Diaz A., Miura M. MODIS detects a devastating algal bloom in Paracas Bay, Peru. Eos, Trans. Am. Geophys. Union 2004, 85:465-472.
28. Klinck J.M. Circulation near submarine canyons: a modeling study. J. Geophys. Res. 1996, 101:1211-1223.
29. Kudela R., Pitcher G., Probyn T., Figueiras F., Moita T., Trainer V. Harmful algal blooms in coastal upwelling systems. Oceanography 2005, 18:184-197.
30. Kudela R.M., Ryan J.P., Blakely M.D., Lane J.Q., Peterson T.D. Linking the physiology and ecology of Cochlodinium to better understand harmful algal bloom events: a comparative approach. Harmful Algae 2008, 7:278-292.
31. Kudela R., Lane J., Cochlan W. The potential role of anthropogenically derived nitrogen in the growth of harmful algae in California, USA. Harmful Algae 2008, 8:103-110.
32. Kudela R.M., Seeyave S., Cochlan W.P. The role of nutrients in regulation and promotion of harmful algal blooms in upwelling systems. Prog. Oceanogr. 2010, 85:122-135. 10.1016/j.pocean.2010.02.008.
33. Mackey K.R.M., Mioni C.E., Ryan J.P., Paytan A. Phosphorus cycling in the red tide incubator region of Monterey Bay in response to upwelling. Front. Microbiol. 2012, 3:33. 10.3389/fmicb.2012.00033.
34. Maldonado M.T., Hughes M.P., Rue E.L., Wells M.L. The effect of Fe and Cu on growth and domoic acid production by pseudo-nitzschia multiseries and Pseudo-nitzschia australis. Limnol. Oceanogr. 2002, 47:515-526.
35. Matthews, S.G., Pitcher, G.C., 1996. Worst recorded marine mortality on the South African coast. Harmful and Toxic Algal Blooms. In: International Conference on Marine Toxic Phytoplankton, Sendai (Japan), UNESCO, Paris, p. 89-92.
36. Mazzillo F.F.M., Ryan J.P.,Silver M.W., 2011 Parasitism as a biological control agent of dino flagellate blooms in the California Current System. Harmful Algae 10(6), 763-773.
37. McManus M.A., Kudela R.M., Silver M.W., Steward G.F., Donaghay P.L., Sullivan J.M. Cryptic blooms: are thin layers the missing connection?. Estuaries Coasts: J. CERF 2008, 31:396-401. 10.1007/s12237-007-9025-4.
38. Moita, M.T., Palma, S., Oliviera, P.B., Vidal, T., Silva, A., Vilarinho, M.G., 2006. The return of Gymnodinium catenatum after 10 years: bloom initiation and transport of the Portuguese coast. In: Proceedings of 12th International Congress on Harmful Algae, PO.06-14, September 2006, Copenhagen.
39. O'Halloran C., Silver M.W., Holman T.R., Scholin C.A. Heterosigma akashiwo in central California waters. Harmful Algae 2006, 5:124-132.
40. Penta, B., 2011, BIOSPACE/DYABOLIC October 2010 Field Program, Monterey Bay, California, Data Report, NRL/MR/7330-11-9342.
41. Pitcher G.C., Boyd A.J., Horstman D.A., Mitchell-Innes B.A. Subsurface dinoflagellate populations, frontal blooms and the formation of red tide in the southern Benguela upwelling system. Mar. Ecol. Prog. Ser. 1998, 172:253-264.
42. Pitcher G.C., Nelson G. Characteristics of the surface boundary layer important to the development of red tide on the southern Namaqua shelf of the Benguela upwelling system. Limnol. Oceanogr. 2006, 51:2660-2674.
43. Pitcher G.C., Figueiras F.G., Hickey B.M., Moita M.T. The physical oceanography of upwelling systems and the development of harmful algal blooms. Prog. Oceanogr. 2010, 85:5-32. 10.1016/j.pocean.2010.02.002.
44. Preston C.M., Harris A., Ryan J.P., Roman B., Marin R., et al. Underwater application of quantitative PCR on an ocean mooring. PLoS ONE 2011, 6(8):e22522.
45. Ramp S.R., Paduan J.D., Shulman I., Kindle J., Bahr F.L., Chavez F.P. Observations of upwelling and relaxation events in the northern Monterey Bay during August 2000. J. Geophys. Res. 2005, 110:C07013. 10.1029/2004JC002538.
46. Rhodes L., Selwood A., McNabb P., Briggs L., Adamson J., van Ginkel R., Laczka O. Trace metal effects on the production of biotoxins by microalgae. Afr. J. Mar. Sci. 2006, 28:393-397.
47. Rienecker E.R., Ryan J.P., Marin R., Blum M., Dietz C., Chavez F.P. Synoptic mapping of the phytoplankton size distribution, with applications to the ecology of red tides and harmful algal blooms. Limnol. Oceanogr.: Methods 2008, 6:153-161.
48. Rosenfeld L.K., Schwing F.B., Garfield N., Tracy D.E. Bifurcated flow from an upwelling center: a cold water source for Monterey Bay. Cont. Shelf Res. 1994, 14:931-964.
49. Rue E., Bruland K. Domoic acid binds iron and copper: a possible role for the toxin produced by the marine diatom Pseudo-nitzschia. Mar. Chem. 2001, 76:127-134.
50. Ryan J.P., Chavez F.P., Bellingham J.G. Physical-biological coupling in Monterey Bay, California: topographic influences on phytoplankton ecology. Mar. Ecol. Prog. Ser. 2005, 287:23-32.
51. Ryan J.P., Dierssen H.M., Kudela R.M., Scholin C.A., Johnson K.S., Sullivan J.M., Fischer A.M., Rienecker E.V., McEnaney P.R., Chavez F.P. Coastal ocean physics and red tides, an example from Monterey Bay, California. Oceanography 2005, 18:246-255.
52. Ryan J.P., Gower J.F.R., King S.A., Bissett W.P., Fischer A.M., Kudela R.M., Kolber Z., Mazzillo F., Rienecker E.V., Chavez F.P. A coastal ocean extreme bloom incubator. Geophys. Res. Lett. 2008, 35:L12602. 10.1029/2008GL034081.
53. Ryan J.P., McManus M.A., Paduan J.D., Chavez F.P. Phytoplankton thin layers within coastal upwelling system fronts. Mar. Ecol. Prog. Ser. 2008, 354:21-34.
54. Ryan J.P., Fischer A.M., Kudela R.M., Gower J.F.R., King S.A., Marin R., Chavez F.P. Influences of upwelling and downwelling winds on red tide bloom dynamics in Monterey Bay, California. Cont. Shelf Res. 2009, 29:785-795.
55. Ryan J.P., McManus M.A., Sullivan J.M. Interacting physical, chemical and biological forcing of phytoplankton thin-layer variability in Monterey Bay, California. Cont. Shelf Res. 2010, 30:7-16.
56. Ryan J.P., Johnson S.B., Sherman A., Rajan K., Py F., Thomas H., Harvey J.B.J., Bird L., Paduan J.D., Vrijenhoek R.C. Mobile autonomous process sampling within coastal ocean observing systems. Limnol. Oceanogr.: Methods 2010, 8:394-402.
57. Ryan J.P., Fischer A.M., Kudela R.M., McManus M.A., Myers J.S., Paduan J.D., Ruhsam C.M., Woodson C.B., Zhang Y. Recurrent frontal slicks of a coastal ocean upwelling shadow. J. Geophys. Res. 2010, 115:C12070. 10.1029/2010JC006398.
58. Ryan J., Greenfield D., MarinIII R., Preston C., Roman B., Jensen S., Pargett D., Birch J., Mikulski C., Doucette G., Scholin C. Harmful phytoplankton ecology studies using an autonomous molecular analytical and ocean observing network. Limnol. Oceanogr 2011, 56(4):1255-1272.
59. Scholin C.A., Gulland F., Doucette G.J., Benson S., Busman M., Chavez F.P., Cordaro J., DeLong R., De Vogelaere A., Harvey J., Haulena M., Lefebvre K., Lipscomb T., Loscutoff S., Lowenstine L.J., Marin III R., Miller P.E., McLellan W.A., Moeller P.D.R., Powell C.L., Rowles T., Silvagni P., Silver M., Spraker T., Trainer V., Van Dolah F.M. Mortality of sea lions along the central California coast linked to a toxic diatom bloom. Nature 2000, 403:80-84.
60. Scholin C., Doucette G., Jensen S., Roman B., Pargett D., Marin R., Preston C., Jones W., Feldman J., Everlove C., Harris A., Alvarado N., Massion E., Birch J., Greenfield D., Vrijenhoek R., Mikulski C., Jones K. Remote detection of marine microbes, small invertebrates, harmful algae and biotoxins using the Environmental Sample Processor (ESP). Oceanography 2009, 22:158-167.
61. Shea R.E., Broenkow W.W. The role of internal tides in the nutrient enrichment of Monterey Bay, California. Estuarine Coastal Shelf Sci. 1982, 15:57-66.
62. Shulman I., Anderson S., Rowley C., deRada S., Doyle J., Ramp S. Comparisons of upwelling and relaxation events in the Monterey Bay area. J. Geophys. Res. 2010, V.115:C06016. 10.1029/2009JC005483.
63. Shulman I., Moline M.A., Penta B., Anderson S., Oliver M., Haddock S.H.D. Observed and modeled bio-optical, bioluminescent, and physical properties during a coastal upwelling event in Monterey Bay, California. J. Geophys. Res. 2011, 116:C01018. 10.1029/2010JC006525.
64. Smayda T.J. Adaptations and selection of harmful and other dinoflagellate species in upwelling systems. 2. Motility and migratory behaviour. Prog. Oceanogr. 2010, 85:71-91. 10.1016/j.pocean.2010.02.005.
65. Smayda T.J., Trainer V.L. Dinoflagellate blooms in upwelling systems: seeding, variability, and contrasts with diatom bloom behavior. Prog. Oceanogr. 2010, 85:92-107. 10.1016/j.pocean.2010.02.006.
66. Trainer V.L., Adams N.G., Bill B.D., Stehr C.M., Wekell J.C., Moeller P., Busman M., Woodruff D. Domoic acid production near California coastal upwelling zones, June 1998. Limnol. Oceanogr. 2000, 45:1818-1833.
67. Trainer V.L., Pitcher G.C., Reguera B., Smayda T.J. The distribution and impacts of harmful algal bloom species in eastern boundary upwelling systems. Prog. Oceanogr. 2010, 85:33-52. 10.1016/j.pocean.2010.02.003.
68. Wang Z., Maucher-Fuquay J., Fire S.E., Mikulski C.M., Haynes B., Doucette G.J., Ramsdell J.S. Optimization of solid-phase extraction and liquid chromatography-tandem mass spectrometry for the determination of domoic acid in seawater, phytoplankton, and mammalian fluids and tissues. Anal. Chim. Acta 2012, 715:71-79.
69. Welborn, V., 2000. Pseudo-nitzschia in nearshore sediments and entry of domoic acid (DA) into benthic communities, MS Thesis, UC Santa Cruz.
70. Woodson C.B., Eerkes-Medrano D.I., Flores-Morales A., Foley M.M., Henkel S.K., Hessing-Lewis M., Jacinto D., Needles L., Nishizaki M.T., O'Leary J., Ostrander C.E., Pespeni M., Schwager K.B., Tyburczy J.A., Weersing K.A., Kirincich A.R., Barth J.A., McManus M.A., Washburn L. Local diurnal upwelling driven by sea breezes in northern Monterey Bay. Cont. Shelf Res. 2007, 27:2289-2302.
71. Woodson C.B., Washburn L., Barth J.A., Hoover D.J., Kirincich A.R., McManus M.A., Ryan J.P., Tyburczy J. Northern Monterey Bay upwelling shadow front: Observations of a coastally and surface-trapped buoyant plume. J. Geophys. Res. 2009, 114:C12013. 10.1029/2009JC005623.
72. Woodson C.B., Barth J.A., Cheriton O.M., McManus M.A., Ryan J.P., Washburn L., et al. Observations of internal wave packets propagating along-shelf in northern Monterey Bay. Geophys. Res. Lett. 2011, 38:L01605. 10.1029/2010GL045453.
73. Zhang Y., McEwen R.S., Ryan J.P., Bellingham J.G. Design and tests of an adaptive triggering method for capturing peak samples in a thin phytoplankton layer by an autonomous underwater vehicle. IEEE J. Ocean. Eng. 2010, 35:785-796. 10.1109/JOE.2010.2081031.