-
2
-
-
77956126894
-
Xanthomonas AvrBs3 Family-Type III Effectors: Discovery and function
-
Boch J, Bonas U (2010) Xanthomonas AvrBs3 Family-Type III Effectors: discovery and function. Annu Rev Phytopathol 48:419-436
-
(2010)
Annu Rev Phytopathol
, vol.48
, pp. 419-436
-
-
Boch, J.1
Bonas, U.2
-
3
-
-
72149110399
-
Breaking the code of DNA binding specificity of TAL-type III effectors
-
Boch J, Scholze H, Schornack S, Landgraf A, Hahn S, Kay S, Lahaye T, Nickstadt A, Bonas U (2009) Breaking the code of DNA binding specificity of TAL-type III effectors. Science 326:1509-1512
-
(2009)
Science
, vol.326
, pp. 1509-1512
-
-
Boch, J.1
Scholze, H.2
Schornack, S.3
Landgraf, A.4
Hahn, S.5
Kay, S.6
Lahaye, T.7
Nickstadt, A.8
Bonas, U.9
-
4
-
-
80053343092
-
TAL effectors: Customizable proteins for DNA targeting
-
Bogdanove AJ, Voytas DF (2011) TAL effectors: customizable proteins for DNA targeting. Science 333:1843-1846
-
(2011)
Science
, vol.333
, pp. 1843-1846
-
-
Bogdanove, A.J.1
Voytas, D.F.2
-
6
-
-
79960064013
-
Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting
-
Cermak T, Doyle EL, Christian M, Wang L, Zhang Y, Schmidt C, Baller JA, Somia NV, Bogdanove AJ, Voytas DF (2011) Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting. Nucleic Acids Res 39:e82
-
(2011)
Nucleic Acids Res
, vol.39
-
-
Cermak, T.1
Doyle, E.L.2
Christian, M.3
Wang, L.4
Zhang, Y.5
Schmidt, C.6
Baller, J.A.7
Somia, N.V.8
Bogdanove, A.J.9
Voytas, D.F.10
-
7
-
-
78951479577
-
Targeting DNA double-strand breaks with TAL effector nucleases
-
Christian M, Cermak T, Doyle EL, Schmidt C, Zhang F, Hummel A, Bogdanove AJ, Voytas DF (2010) Targeting DNA double-strand breaks with TAL effector nucleases. Genetics 186:757-761
-
(2010)
Genetics
, vol.186
, pp. 757-761
-
-
Christian, M.1
Cermak, T.2
Doyle, E.L.3
Schmidt, C.4
Zhang, F.5
Hummel, A.6
Bogdanove, A.J.7
Voytas, D.F.8
-
8
-
-
80053022290
-
A TALE of two nucleases: Gene targeting for the masses?
-
Clark KJ, Voytas DF, Ekker SC (2011) A TALE of two nucleases: gene targeting for the masses? Zebrafish 8:147-149
-
(2011)
Zebrafish
, vol.8
, pp. 147-149
-
-
Clark, K.J.1
Voytas, D.F.2
Ekker, S.C.3
-
9
-
-
84864856835
-
Comprehensive interrogation of natural TALE DNA-binding modules and transcriptional repressor domains
-
Cong L, Zhou R, Y-c Kuo, Cunniff M, Zhang F (2012) Comprehensive interrogation of natural TALE DNA-binding modules and transcriptional repressor domains. Nat Commun 3:968
-
(2012)
Nat Commun
, vol.3
, pp. 968
-
-
Cong, L.1
Zhou, R.2
Kuo, Y.-C.3
Cunniff, M.4
Zhang, F.5
-
10
-
-
79958065910
-
Targeted mutagenesis of duplicated genes in soybean with zinc-finger nucleases
-
Curtin SJ, Zhang F, Sander JD, Haun WJ, Starker C, Baltes NJ, Reyon D, Dahlborg EJ, Goodwin MJ, Coffman AP, Dobbs D, Joung JK, Voytas DF, Stupar RM (2011) Targeted mutagenesis of duplicated genes in soybean with zinc-finger nucleases. Plant Physiol 156:466-473
-
(2011)
Plant Physiol
, vol.156
, pp. 466-473
-
-
Curtin, S.J.1
Zhang, F.2
Sander, J.D.3
Haun, W.J.4
Starker, C.5
Baltes, N.J.6
Reyon, D.7
Dahlborg, E.J.8
Goodwin, M.J.9
Coffman, A.P.10
Dobbs, D.11
Joung, J.K.12
Voytas, D.F.13
Stupar, R.M.14
-
11
-
-
84866156176
-
Simple methods for generating and detecting locus-specific mutations induced with TALENs in the zebrafish genome
-
Dahlem TJ, Hoshijima K, Jurynec MJ, Gunther D, Starker CG, Locke AS, Weis AM, Voytas DF, Grunwald DJ (2012) Simple methods for generating and detecting locus-specific mutations induced with TALENs in the zebrafish genome. PLoS Genet 8:e1002861
-
(2012)
PLoS Genet
, vol.8
-
-
Dahlem, T.J.1
Hoshijima, K.2
Jurynec, M.J.3
Gunther, D.4
Starker, C.G.5
Locke, A.S.6
Weis, A.M.7
Voytas, D.F.8
Grunwald, D.J.9
-
12
-
-
84857032466
-
Structural basis for sequence-specific recognition of DNA by TAL effectors
-
Deng D, Yan C, Pan X, Mahfouz M, Wang J, Zhu JK, Shi Y, Yan N (2012a) Structural basis for sequence-specific recognition of DNA by TAL effectors. Science 335:720-723
-
(2012)
Science
, vol.335
, pp. 720-723
-
-
Deng, D.1
Yan, C.2
Pan, X.3
Mahfouz, M.4
Wang, J.5
Zhu, J.K.6
Shi, Y.7
Yan, N.8
-
13
-
-
84867095660
-
Recognition of methylated DNA by TAL effectors
-
Deng D, Yin P, Yan C, Pan X, Gong X, Qi S, Xie T, Mahfouz M, Zhu JK, Yan N, Shi Y (2012b) Recognition of methylated DNA by TAL effectors. Cell Res 22:1502-1504
-
(2012)
Cell Res
, vol.22
, pp. 1502-1504
-
-
Deng, D.1
Yin, P.2
Yan, C.3
Pan, X.4
Gong, X.5
Qi, S.6
Xie, T.7
Mahfouz, M.8
Zhu, J.K.9
Yan, N.10
Shi, Y.11
-
14
-
-
44949155482
-
Heritable targeted gene disruption in zebrafish using designed zinc-finger nucleases
-
Doyon Y, McCammon JM, Miller JC, Faraji F, Ngo C, Katibah GE, Amora R, Hocking TD, Zhang L, Rebar EJ, Gregory PD, Urnov FD, Amacher SL (2008) Heritable targeted gene disruption in zebrafish using designed zinc-finger nucleases. Nat Biotechnol 26:702-708
-
(2008)
Nat Biotechnol
, vol.26
, pp. 702-708
-
-
Doyon, Y.1
McCammon, J.M.2
Miller, J.C.3
Faraji, F.4
Ngo, C.5
Katibah, G.E.6
Amora, R.7
Hocking, T.D.8
Zhang, L.9
Rebar, E.J.10
Gregory, P.D.11
Urnov, F.D.12
Amacher, S.L.13
-
15
-
-
0026562884
-
Improved method for high efficiency transformation of intact yeast cells
-
Gietz D, St Jean A, Woods RA, Schiestl RH (1992) Improved method for high efficiency transformation of intact yeast cells. Nucleic Acids Res 20:1425
-
(1992)
Nucleic Acids Res
, vol.20
, pp. 1425
-
-
Gietz, D.1
St Jean, A.2
Woods, R.A.3
Schiestl, R.H.4
-
16
-
-
77953702888
-
Directed evolution of an enhanced and highly efficient fokI cleavage domain for zinc finger nucleases
-
Guo J, Gaj T, Barbas Iii CF (2010) Directed evolution of an enhanced and highly efficient fokI cleavage domain for zinc finger nucleases. J Mol Biol 400:96-107
-
(2010)
J Mol Biol
, vol.400
, pp. 96-107
-
-
Guo, J.1
Gaj, T.2
Barbas III, C.F.3
-
17
-
-
0025994140
-
Guide to yeast genetics and molecular biology
-
Guthrie C, Fink GR (1991) Guide to yeast genetics and molecular biology. Methods Enzymol 3-37
-
(1991)
Methods Enzymol
, pp. 3-37
-
-
Guthrie, C.1
Fink, G.R.2
-
18
-
-
34447505162
-
Repeat domain diversity of avrBs3-like genes in Ralstonia solanacearum strains and association with host preferences in the field
-
Heuer H, Yin YN, Xue QY, Smalla K, Guo JH (2007) Repeat domain diversity of avrBs3-like genes in Ralstonia solanacearum strains and association with host preferences in the field. Appl Environ Microbiol 73:4379-4384
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 4379-4384
-
-
Heuer, H.1
Yin, Y.N.2
Xue, Q.Y.3
Smalla, K.4
Guo, J.H.5
-
19
-
-
79961185942
-
Heritable gene targeting in zebrafish using customized TALENs
-
Huang P, Xiao A, Zhou M, Zhu Z, Lin S, Zhang B (2011) Heritable gene targeting in zebrafish using customized TALENs. Nat Biotechnol 29:699-700
-
(2011)
Nat Biotechnol
, vol.29
, pp. 699-700
-
-
Huang, P.1
Xiao, A.2
Zhou, M.3
Zhu, Z.4
Lin, S.5
Zhang, B.6
-
20
-
-
0018699773
-
Microbial determinations by flow cytometry
-
Hutter KJ, Eipel HE (1979) Microbial determinations by flow cytometry. J Gen Microbiol 113:369-375
-
(1979)
J Gen Microbiol
, vol.113
, pp. 369-375
-
-
Hutter, K.J.1
Eipel, H.E.2
-
21
-
-
23044448464
-
Characterization of AvrBs3-like effectors from a Brassicaceae pathogen reveals virulence and avirulence activities and a protein with a novel repeat architecture
-
Kay S, Boch J, Bonas U (2005) Characterization of AvrBs3-like effectors from a Brassicaceae pathogen reveals virulence and avirulence activities and a protein with a novel repeat architecture. Mol Plant-Microbe Interact 18:838-848
-
(2005)
Mol Plant-Microbe Interact
, vol.18
, pp. 838-848
-
-
Kay, S.1
Boch, J.2
Bonas, U.3
-
22
-
-
0037738479
-
Disruption of the Saccharomyces cerevisiae cell-wall pathway gene SLG1 causes hypersensitivity to the antitumor drug bleomycin
-
Leduc A, He CH, Ramotar D (2003) Disruption of the Saccharomyces cerevisiae cell-wall pathway gene SLG1 causes hypersensitivity to the antitumor drug bleomycin. Mol Genet Genomics 269:78-89
-
(2003)
Mol Genet Genomics
, vol.269
, pp. 78-89
-
-
Leduc, A.1
He, C.H.2
Ramotar, D.3
-
23
-
-
84863118393
-
Rapid and highly efficient construction of TALE-based transcriptional regulators and nucleases for genome modification
-
Li L, Piatek MJ, Atef A, Piatek A, Wibowo A, Fang X, Sabir JS, Zhu JK, Mahfouz MM (2012a) Rapid and highly efficient construction of TALE-based transcriptional regulators and nucleases for genome modification. Plant Mol Biol 78:407-416
-
(2012)
Plant Mol Biol
, vol.78
, pp. 407-416
-
-
Li, L.1
Piatek, M.J.2
Atef, A.3
Piatek, A.4
Wibowo, A.5
Fang, X.6
Sabir, J.S.7
Zhu, J.K.8
Mahfouz, M.M.9
-
24
-
-
84860736700
-
High-efficiency TALEN-based gene editing produces disease-resistant rice
-
Li T, Liu B, Spalding MH, Weeks DP, Yang B (2012b) High-efficiency TALEN-based gene editing produces disease-resistant rice. Nat Biotechnol 30:390-392
-
(2012)
Nat Biotechnol
, vol.30
, pp. 390-392
-
-
Li, T.1
Liu, B.2
Spalding, M.H.3
Weeks, D.P.4
Yang, B.5
-
25
-
-
84880287458
-
Characterization and DNA-binding specificities of Ralstonia TAL-like effectors
-
Li L, Atef A, Piatek A, Ali Z, Piatek M, Aouida M, Sharakou A, Mahjoub A, Wang G, Khan S, Fedoroff NV, Zhu JK, Mahfouz M (2013) Characterization and DNA-binding specificities of Ralstonia TAL-like effectors. Mol Plant 6:1318-1330
-
(2013)
Mol Plant
, vol.6
, pp. 1318-1330
-
-
Li, L.1
Atef, A.2
Piatek, A.3
Ali, Z.4
Piatek, M.5
Aouida, M.6
Sharakou, A.7
Mahjoub, A.8
Wang, G.9
Khan, S.10
Fedoroff, N.V.11
Zhu, J.K.12
Mahfouz, M.13
-
26
-
-
84861348512
-
Efficient and specific modifications of the Drosophila genome by means of an easy TALEN strategy
-
Liu J, Li C, Yu Z, Huang P, Wu H, Wei C, Zhu N, Shen Y, Chen Y, Zhang B, Deng W-M, Jiao R (2012) Efficient and specific modifications of the Drosophila genome by means of an easy TALEN strategy. J Genet Genom 39:209-215
-
(2012)
J Genet Genom
, vol.39
, pp. 209-215
-
-
Liu, J.1
Li, C.2
Yu, Z.3
Huang, P.4
Wu, H.5
Wei, C.6
Zhu, N.7
Shen, Y.8
Chen, Y.9
Zhang, B.10
Deng, W.-M.11
Jiao, R.12
-
27
-
-
77956975564
-
RNA-directed DNA methylation: Mechanisms and functions
-
Mahfouz MM (2010) RNA-directed DNA methylation: mechanisms and functions. Plant Signal Behav 5:806-816
-
(2010)
Plant Signal Behav
, vol.5
, pp. 806-816
-
-
Mahfouz, M.M.1
-
28
-
-
84855884976
-
TALE nucleases and next generation GM crops
-
Mahfouz MM, Li L (2011) TALE nucleases and next generation GM crops. GM Crop 2:99-103
-
(2011)
GM Crop
, vol.2
, pp. 99-103
-
-
Mahfouz, M.M.1
Li, L.2
-
29
-
-
79952302385
-
De novo-engineered transcription activator-like effector (TALE) hybrid nuclease with novel DNA binding specificity creates double-strand breaks
-
Mahfouz MM, Li L, Shamimuzzaman M, Wibowo A, Fang X, Zhu JK (2011) De novo-engineered transcription activator-like effector (TALE) hybrid nuclease with novel DNA binding specificity creates double-strand breaks. Proc Natl Acad Sci USA 108:2623-2628
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 2623-2628
-
-
Mahfouz, M.M.1
Li, L.2
Shamimuzzaman, M.3
Wibowo, A.4
Fang, X.5
Zhu, J.K.6
-
30
-
-
84855882014
-
Targeted transcriptional repression using a chimeric TALE-SRDX repressor protein
-
Mahfouz MM, Li L, Piatek M, Fang X, Mansour H, Bangarusamy DK, Zhu JK (2012) Targeted transcriptional repression using a chimeric TALE-SRDX repressor protein. Plant Mol Biol 3:311-321
-
(2012)
Plant Mol Biol
, vol.3
, pp. 311-321
-
-
Mahfouz, M.M.1
Li, L.2
Piatek, M.3
Fang, X.4
Mansour, H.5
Bangarusamy, D.K.6
Zhu, J.K.7
-
31
-
-
84857029597
-
The crystal structure of TAL effector PthXo1 bound to its DNA target
-
Mak AN, Bradley P, Cernadas RA, Bogdanove AJ, Stoddard BL (2012) The crystal structure of TAL effector PthXo1 bound to its DNA target. Science 335:716-719
-
(2012)
Science
, vol.335
, pp. 716-719
-
-
Mak, A.N.1
Bradley, P.2
Cernadas, R.A.3
Bogdanove, A.J.4
Stoddard, B.L.5
-
32
-
-
0030911140
-
Normal processing of AP sites in Apn1-deficient Saccharomyces cerevisiae is restored by Escherichia coli genes expressing either exonuclease III or endonuclease III
-
Masson JY, Ramotar D (1997) Normal processing of AP sites in Apn1-deficient Saccharomyces cerevisiae is restored by Escherichia coli genes expressing either exonuclease III or endonuclease III. Mol Microbiol 24:711-721
-
(1997)
Mol Microbiol
, vol.24
, pp. 711-721
-
-
Masson, J.Y.1
Ramotar, D.2
-
33
-
-
78650739853
-
Regulation of selected genome loci using de novo-engineered transcription activator-like effector (TALE)-type transcription factors
-
Morbitzer R, Romer P, Boch J, Lahaye T (2010) Regulation of selected genome loci using de novo-engineered transcription activator-like effector (TALE)-type transcription factors. Proc Natl Acad Sci USA 107:21617-21622
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 21617-21622
-
-
Morbitzer, R.1
Romer, P.2
Boch, J.3
Lahaye, T.4
-
34
-
-
72149090954
-
A simple cipher governs DNA recognition by TAL effectors
-
Moscou MJ, Bogdanove AJ (2009) A simple cipher governs DNA recognition by TAL effectors. Science 326:1501
-
(2009)
Science
, vol.326
, pp. 1501
-
-
Moscou, M.J.1
Bogdanove, A.J.2
-
35
-
-
42949083192
-
Unexpected failure rates for modular assembly of engineered zinc fingers
-
Ramirez CL, Foley JE, Wright DA, Muller-Lerch F, Rahman SH, Cornu TI, Winfrey RJ, Sander JD, Fu F, Townsend JA, Cathomen T, Voytas DF, Joung JK (2008) Unexpected failure rates for modular assembly of engineered zinc fingers. Nat Methods 5:374-375
-
(2008)
Nat Methods
, vol.5
, pp. 374-375
-
-
Ramirez, C.L.1
Foley, J.E.2
Wright, D.A.3
Muller-Lerch, F.4
Rahman, S.H.5
Cornu, T.I.6
Winfrey, R.J.7
Sander, J.D.8
Fu, F.9
Townsend, J.A.10
Cathomen, T.11
Voytas, D.F.12
Joung, J.K.13
-
36
-
-
84860747716
-
FLASH assembly of TALENs for high-throughput genome editing
-
Reyon D, Tsai SQ, Khayter C, Foden JA, Sander JD, Joung JK (2012) FLASH assembly of TALENs for high-throughput genome editing. Nat Biotechnol 30:460-465
-
(2012)
Nat Biotechnol
, vol.30
, pp. 460-465
-
-
Reyon, D.1
Tsai, S.Q.2
Khayter, C.3
Foden, J.A.4
Sander, J.D.5
Joung, J.K.6
-
37
-
-
35548939950
-
Plant pathogen recognition mediated by promoter activation of the pepper Bs3 resistance gene
-
Romer P, Hahn S, Jordan T, Strauss T, Bonas U, Lahaye T (2007) Plant pathogen recognition mediated by promoter activation of the pepper Bs3 resistance gene. Science 318:645-648
-
(2007)
Science
, vol.318
, pp. 645-648
-
-
Romer, P.1
Hahn, S.2
Jordan, T.3
Strauss, T.4
Bonas, U.5
Lahaye, T.6
-
38
-
-
79961192836
-
Targeted gene disruption in somatic zebrafish cells using engineered TALENs
-
Sander JD, Cade L, Khayter C, Reyon D, Peterson RT, Joung JK, Yeh JR (2011) Targeted gene disruption in somatic zebrafish cells using engineered TALENs. Nat Biotechnol 29:697-698
-
(2011)
Nat Biotechnol
, vol.29
, pp. 697-698
-
-
Sander, J.D.1
Cade, L.2
Khayter, C.3
Reyon, D.4
Peterson, R.T.5
Joung, J.K.6
Yeh, J.R.7
-
39
-
-
84880737219
-
Rapid and efficient gene modification in rice and Brachypodium using TALENs
-
Shan Q, Wang Y, Chen K, Liang Z, Li JUN, Zhang Y, Zhang K, Liu J, Voytas DF, Zheng X, Zhang Y, Gao C (2013) Rapid and efficient gene modification in rice and Brachypodium using TALENs. Molecular Plant 4:1365-1368
-
(2013)
Molecular Plant
, vol.4
, pp. 1365-1368
-
-
Shan, Q.1
Wang, Y.2
Chen, K.3
Liang, Z.4
Li, J.U.N.5
Zhang, Y.6
Zhang, K.7
Liu, J.8
Voytas, D.F.9
Zheng, X.10
Zhang, Y.11
Gao, C.12
-
41
-
-
66249147273
-
Precise genome modification in the crop species Zea mays using zinc-finger nucleases
-
Shukla VK, Doyon Y, Miller JC, DeKelver RC, Moehle EA, Worden SE, Mitchell JC, Arnold NL, Gopalan S, Meng X, Choi VM, Rock JM, Wu YY, Katibah GE, Zhifang G, McCaskill D, Simpson MA, Blakeslee B, Greenwalt SA, Butler HJ, Hinkley SJ, Zhang L, Rebar EJ, Gregory PD, Urnov FD (2009) Precise genome modification in the crop species Zea mays using zinc-finger nucleases. Nature 459:437-441
-
(2009)
Nature
, vol.459
, pp. 437-441
-
-
Shukla, V.K.1
Doyon, Y.2
Miller, J.C.3
DeKelver, R.C.4
Moehle, E.A.5
Worden, S.E.6
Mitchell, J.C.7
Arnold, N.L.8
Gopalan, S.9
Meng, X.10
Choi, V.M.11
Rock, J.M.12
Wu, Y.Y.13
Katibah, G.E.14
Zhifang, G.15
McCaskill, D.16
Simpson, M.A.17
Blakeslee, B.18
Greenwalt, S.A.19
Butler, H.J.20
Hinkley, S.J.21
Zhang, L.22
Rebar, E.J.23
Gregory, P.D.24
Urnov, F.D.25
more..
-
43
-
-
72149111192
-
Plant science. DNA binding made easy
-
Voytas DF, Joung JK (2009) Plant science. DNA binding made easy. Science 326:1491-1492
-
(2009)
Science
, vol.326
, pp. 1491-1492
-
-
Voytas, D.F.1
Joung, J.K.2
-
45
-
-
79953783824
-
Targeted mutagenesis in Arabidopsis using zinc-finger nucleases
-
Zhang F, Voytas DF (2011) Targeted mutagenesis in Arabidopsis using zinc-finger nucleases. Methods Mol Biol 701:167-177
-
(2011)
Methods Mol Biol
, vol.701
, pp. 167-177
-
-
Zhang, F.1
Voytas, D.F.2
-
46
-
-
84871803423
-
Transcription activator-like effector nucleases enable efficient plant genome engineering
-
Zhang Y, Zhang F, Li X, Baller JA, Qi Y, Starker CG, Bogdanove AJ, Voytas DF (2013) Transcription activator-like effector nucleases enable efficient plant genome engineering. Plant Physiol 161:20-27
-
(2013)
Plant Physiol
, vol.161
, pp. 20-27
-
-
Zhang, Y.1
Zhang, F.2
Li, X.3
Baller, J.A.4
Qi, Y.5
Starker, C.G.6
Bogdanove, A.J.7
Voytas, D.F.8
|