Deciphering the role of various cis-acting regulatory elements in controlling samDC gene expression in rice

Plant Signaling and Behavior

Volumn 9, Issue MAR, 2014, Pages

  Basu, Supratim ^a,b   Roychoudhury, Aryadeep ^c   Sengupta, Dibyendu N ^b  

^a UNIVERSITY OF ARKANSAS   (United States)

^b BOSE INSTITUTE   (India)

^c ST XAVIER S COLLEGE   (India)

Author keywords

ABA; Drought; Light; Low temperature; Polyamines; Salinity; SamDC

Indexed keywords

ABSCISIC ACID; ADENOSYLMETHIONINE DECARBOXYLASE; VEGETABLE PROTEIN;

GENE EXPRESSION REGULATION; METABOLISM; PHYSIOLOGICAL STRESS; REGULATORY SEQUENCE; RICE;

ABSCISIC ACID; ADENOSYLMETHIONINE DECARBOXYLASE; GENE EXPRESSION REGULATION, PLANT; ORYZA SATIVA; PLANT PROTEINS; REGULATORY ELEMENTS, TRANSCRIPTIONAL; STRESS, PHYSIOLOGICAL;

EID: 84899151285     PISSN: 15592316     EISSN: 15592324     Source Type: Journal    
DOI: 10.4161/psb.28391     Document Type: Article

References (16)

1. Basu S, Roychoudhury A, Sengupta DN. Identification of trans-acting factors regulating SamDC expression in Oryza sativa. Biochemical and Biophysical Research Communication 2014; Forthcoming; http://dx.doi. org/10.1016.j.bbrc.2014.02.004
2. Hasegawa PM, Bressan RA, Zhu J-K, Bohnert HJ. Plant cellular and molecular responses to high salinity. Annu Rev Plant Physiol Plant Mol Biol 2000; 51:463-99; PMID:15012199; http://dx.doi.org/10.1146/ annurev.arplant.51.1.463
3. Hu WW, Gong H, Pua EC. The pivotal roles of the plant S-adenosylmethionine decarboxylase 5'untranslated leader sequence in regulation of gene expression at the transcriptional and posttranscriptional levels. Plant Physiol 2005; 138:276-86; PMID:15821146; http://dx.doi.org/10.1104/pp.104.056770
4. Li Z-Y, Chen S-Y. Isolation and characterization of a salt- and drought-inducible gene for S-adenosylmethionine decarboxylase from wheat (triticum aestivum L.). J Plant Physiol 2000; 156:386-93
5. Roychoudhury A, Basu S, Sengupta DN. Amelioration of salinity stress by exogenously applied spermidine or spermine in three varieties of indica rice differing in their level of salt tolerance. J Plant Physiol 2011; 168:317-28; PMID:20728960; http://dx.doi. org/10.1016/j.jplph.2010.07.009
6. Uno Y, Furihata T, Abe H, Yoshida R, Shinozaki K, Yamaguchi-Shinozaki K. Arabidopsis basic leucine zipper transcription factors involved in an abscisic aciddependent signal transduction pathway under drought and high-salinity conditions. Proc Natl Acad Sci U S A 2000; 97:11632-7; PMID:11005831; http://dx.doi. org/10.1073/pnas.190309197
7. Roychoudhury A, Gupta B, Sengupta DN. Transacting factor designated OSBZ8 interacts with both typical abscisic acid responsive elements as well as abscisic acid responsive element-like sequences in the vegetative tissues of indica rice cultivars. Plant Cell Rep 2008; 27:779-94; PMID:18183401; http://dx.doi. org/10.1007/s00299-007-0498-1
8. Eulgem T, Rushton PJ, Robatzek S, Somssich IE. The WRKY superfamily of plant transcription factors. Trends Plant Sci 2000; 5:199-206; PMID:10785665; http://dx.doi.org/10.1016/S1360-1385(00)01600-9
9. Hara K, Yagi M, Kusano T, Sano H. Rapid systemic accumulation of transcripts encoding a tobacco WRKY transcription factor upon wounding. Mol Gen Genet 2000; 263:30-7; PMID:10732671; http:// dx.doi.org/10.1007/PL00008673
10. Rizhsky L, Davletova S, Liang H, Mittler R. The zinc finger protein Zat12 is required for cytosolic ascorbate peroxidase 1 expression during oxidative stress in Arabidopsis. J Biol Chem 2004; 279:11736-43; PMID:14722088; http://dx.doi.org/10.1074/jbc. M313350200
11. Pnueli L, Hallak-Herr E, Rozenberg M, Cohen M, Goloubinoff P, Kaplan A, Mittler R. Molecular and biochemical mechanisms associated with dormancy and drought tolerance in the desert legume Retama raetam. Plant J 2002; 31:319-30; PMID:12164811; http://dx.doi.org/10.1046/j.1365-313X.2002.01364.x
12. Wang H, Guan S, Zhu Z, Wang Y, Lu Y. A valid strategy for precise identifications of transcription factor binding sites in combinatorial regulation using bioinformatic and experimental approaches. Plant Methods 2013; 9:34; PMID:23971995; http://dx.doi. org/10.1186/1746-4811-9-34
13. Martin C, Paz-Ares J. MYB transcription factors in plants. Trends Genet 1997; 13:67-73; PMID:9055608; http://dx.doi.org/10.1016/S0168-9525(96)10049-4
14. Baker SS, Wilhelm KS, Thomashow MF. The 5'-region of Arabidopsis thaliana cor15a has cis-acting elements that confer cold-, drought- and ABA-regulated gene expression. Plant Mol Biol 1994; 24:701-13; PMID:8193295; http://dx.doi.org/10.1007/ BF00029852
15. Thomashow MF. Plant cold acclimation: Freezing tolerance genes and regulatory mechanisms. Annu Rev Plant Physiol Plant Mol Biol 1999; 50:571-99; PMID:15012220; http://dx.doi.org/10.1146/annurev. arplant.50.1.571
16. Yoshida I, Yamagata H, Hirasawa E. Light-regulated gene expression of S-adenosylmethionine decarboxylase in Pharbitis nil. J Exp Bot 1998; 49:617-20