Bacterial communities and species-specific associations with the mucus of Brazilian coral species

Scientific Reports

Volumn 3, Issue , 2013, Pages

  Carlos, Camila ^a   Torres, Tatiana T ^b   Ottoboni, Laura M M ^a  

^a UNIVERSITY OF CAMPINAS   (Brazil)

^b UNIVERSITY OF SÃO PAULO   (Brazil)

Author keywords

[No Author keywords available]

Indexed keywords

RNA 16S;

ANIMAL; ANTHOZOA; ARTICLE; BACTERIUM; BIODIVERSITY; BRAZIL; CLASSIFICATION; ECOSYSTEM; GENETICS; METABOLISM; MICROBIOLOGY; MICROFLORA; PHYLOGENY; SPECIES DIFFERENCE;

ANIMALS; ANTHOZOA; BACTERIA; BIODIVERSITY; BRAZIL; ECOSYSTEM; MICROBIOTA; PHYLOGENY; RNA, RIBOSOMAL, 16S; SPECIES SPECIFICITY;

EID: 84898868297     PISSN: None     EISSN: 20452322     Source Type: Journal    
DOI: 10.1038/srep01624     Document Type: Article

References (43)

1. Lesser, M. P. et al. Nitrogen fixation by symbiotic cyanobacteria provides a source of nitrogen for the scleractinian coral Montastraea cavernosa. Mar. Ecol. Prog. Ser. 346, 143-152 (2007).
2. Ritchie, K. B. Regulation of microbial populations by coral surface mucus and mucus-associated bacteria. Mar. Ecol. Prog. Ser. 322, 1-14 (2006).
3. Rosenberg, E., Koren, O., Reshef, L., Efrony, R. & Zilber-Rosenberg, I. The role of microorganisms in coral health, disease and evolution. Nat. Rev. Microbiol. 5, 355-362 (2007).
4. Shnit-Orland, M. & Kushmaro, A. Coral mucus-associated bacteria: a possible first line of defence. FEMS Microbiol. Ecol. 67, 371-380 (2009).
5. Ainsworth, T. D. & Hoegh-Guldberg, O. Bacterial communities closely associated with coral tissues vary under experimental and natural reef conditions and thermal stress. Aquat. Biol. 4, 289-296 (2009).
6. Thurber, R. V. et al. Metagenomic analysis of stressed coral holobionts. Environ. Microbiol. 11, 2148-2163 (2009).
7. Littman, R. A., Bourne, D. G. & Willis, B. L. Responses of coral-associated bacterial communities to heat stress differ with Symbiodinium type on the same coral host. Mol. Ecol. 19, 1978-90 (2010).
8. Reshef, L., Koren, O., Loya, Y., Zilber-Rosenberg, I. & Rosenberg, E. The coral probiotic hypothesis. Environ. Microbiol. 8, 2067-2073 (2006).
9. Fieseler, L., Horn, M., Wagner, M. & Hentschel, U. Discovery of the novel candidate phylum "Poribacteria" in marine sponges. Appl. Environ. Microbiol. 70, 3724-3732 (2004).
10. Fraune, S. & Bosch, T. C. G. Long-term maintenance of species-specific bacterial microbiota in the basal metazoan Hydra. Proc. Natl. Acad. Sci. USA 32, 13146-13151 (2007).
11. Di Camilo, C. G. et al. Biodiversity of Prokaryotic Communities Associated with the Ectoderm of Ectopleura crocea (Cnidaria, Hydrozoa). PLOS One 7, e39926 (2012).
12. Rohwer, F., Seguritan, V., Azam, F. & Knowlton, N. Diversity and distribution of coral-associated bacteria. Mar. Ecol. Prog. Ser. 243, 1-10 (2002).
13. Reis, A. M. et al. Bacterial diversity associated with the Brazilian endemic reef coral Mussismilia braziliensis. J. Appl. Microbiol. 106, 1378-87 (2009).
14. de Castro, A. P. et al. Bacterial community associated with healthy and diseased reef coral Mussismilia hispida from eastern Brazil. Microb. Ecol. 59, 658-667 (2010).
15. Kvennefors, E. C. et al. Regulation of bacterial communities through antimicrobial activity by the coral holobiont. Microbiol. Ecol. 63, 605-618 (2012).
16. Ceh, J., van Keulen, M. & Bourne, D. G. Coral-associated bacterial communities on Ningaloo Reef, Western Australia. FEMS Microbiol Ecol. 75, 134-144 (2011).
17. Lema, K. A., Willis, B. L. & Bourne, D. G. Corals form characteristic associations with symbiotic nitrogen-fixing bacteria. Appl. Environ. Microbiol. 18, 3136-3144 (2012).
18. Friedline, C. J., Franklin, R. B., McCallister, S. L. & Ruvera, M. C. Microbial community diversity of the eastern Atlantic Ocean reveals geographic differences. Biogeosciences Discuss. 9, 109-150 (2012).
19. Aoshima, H. et al. Improvement of heavy oil degradation by Rhodococcus erythropolis C2. J. Environ. Biotechnol. 5, 107-109 (2006).
20. Ni'matuzahroh, M. G. In-vitro study of interaction between photooxidation and biodegradation of 2-methylphenanthrene by Sphingomonas sp 2MPII. Chemosphere 38, 2501-2507 (1999).
21. Chou, J. H. et al. M. Brachybacterium phenoliresistens sp. nov., isolated from oil-contaminated coastal sand. Int. J. Syst. Evol. Microbiol. 57, 2674-2679 (2007).
22. Koren, O. & Rosenberg, E. Bacteria associated with the bleached and cave coral Oculina patagonica. Microbiol. Ecol. 55, 523-529 (2008).
23. Fudou, R. et al. Haliangicin, a novel antifungal metabolite produced by a marine myxobacterium. 2. Isolation and structural elucidation. J. Antibiot. 54, 153-156 (2001).
24. Kaneko, T. et al. Complete genome structure of the nitrogen-fixing symbiotic bacterium Mesorhizobium loti. DNA Res. 7, 331-338 (2000).
25. Schöttner, S. et al. Inter- and intra-habitat bacterial diversity associated with coldwater corals. ISME J. 3, 756-759 (2009).
26. Schöttner, S., Wild, C., Hoffmann, F., Boetius, A. & Ramette, A. Spatial scales of bacterial diversity in cold-water coral reef ecosystems. PLoS One 7, e32093 (2012).
27. Grice, E. A. A diversity profile of the human skin microbiota. Genome Res. 18, 1043-1050 (2008).
28. Brucker, R. M. et al. Amphibian chemical defense: Antifungal metabolites of the microsymbiont Janthinobacterium lividum on the salamander Plethodon cinereus. J. Chem. Ecol. 34, 1422-1429 (2008).
29. Kooperman, N., Ben-Dov, E., Kramarsky-Winter, E., Barak, Z. & Kushmaro, A. Coral mucus-associated bacterial communities from natural and aquarium environments. FEMS Microbiol. Lett. 276, 106-113 (2007).
30. Geffen, Y., Ron, E. Z. & Rosenberg, E. Regulation of release of antibacterials from stressed scleractinian corals. FEMS Microbiol. Lett. 295, 103-109 (2009).
31. Kellogg, C. A., Lisle, J. T. & Galkiewicz, J. P. Culture-independent characterization of bacterial communities associated with the cold-water coral Lophelia pertusa in the northeastern Gulf of Mexico. Appl. Environ. Microbiol. 75, 2294-2303 (2009).
32. Speck, M. D. & Donachie, S. P. Widespread Oceanospirillaceae bacteria in Porites spp. J. Mar. Biol. 2012 (2012).
33. Morrow, K. M., Moss, A. G., Chadwick, N. E. & Liles, M. R. Bacterial associates of two Caribbean coral species reveal species-specific distribution and geographic variability. Appl. Environ. Microbiol., epub ahead of print (2012).
34. Yang, C. S. et al. Endozoicomonas montiporae sp. nov., isolated from the encrusting pore coral Montipora aequituberculata. Int. J. Syst. Evol. Microbiol. 60, 1158-62 (2010).
35. Frigaard, N.-U. & Dahl, C. Sulfur metabolism in phototrophic sulfur bacteria. Adv. Microb. Physiol. 54, 103-200 (2008).
36. Stanić, D., Oehrle, S., Gantar, M. & Richardson, L. L. Microcystin production and ecological physiology of Caribbean black band disease cyanobacteria. Environ. Microbiol. 13, 900-910 (2011).
37. Childress, J. J. & Girguis, P. R. The metabolic demands of endosymbiotic chemoautotrophic metabolism on host physiological capacities. J. Exp. Biol. 214, 312-325 (2010).
38. Raina, J. B., Tapiolas, D., Willis, B. L. & Bourne, D. G. Coral-associated bacteria and their role in the biogeochemical cycling of sulfur. Appl. Environ. Microbiol. 75, 3492-3501 (2009).
39. Raina, J. B., Dinsdale, E. A., Willis, B. L. & Bourne, D. G. Do the organic sulfur compounds DMSP and DMS drive coral microbial associations? Trends Microbiol. 18, 101-108 (2010).
40. Clingenpeel, S. et al. Yellowstone Lake: high-energy geochemistry and rich bacterial diversity. Environ. Microbiol. 13, 2172-2185 (2011).
41. Huse, S. M. et al. Exploring microbial diversity and taxonomy using SSU rRNA hypervariable tag sequencing. PLoS Genet. 4, e1000255 (2008).
42. Laverock, B. et al. Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME J. 4, 1531-1544 (2010).
43. Theis, K. R., Schmidt, T. M. & Holekamp, K. E. Evidence for a bacterial mechanism for group-specific social odors among hyenas. Sci. Rep. 2, 615.