-
1
-
-
34547875733
-
The effect of lactating rabbit does on the development of the caecal microbial community in the pups they nurture
-
Abecia L, Fondevila M, Balcells J,McEwan NR. 2007. The effect of lactating rabbit does on the development of the caecal microbial community in the pups they nurture. Journal of Applied Microbiology 103:557-564
-
(2007)
Journal of Applied Microbiology
, vol.103
, pp. 557-564
-
-
Abecia, L.1
Fondevila, M.2
Balcells, J.3
McEwan, N.R.4
-
2
-
-
84862777989
-
Highly similar microbial communities are shared among related and trophically similar ant species
-
Anderson KE, Russell JA,Moreau CS, Kautz S, Sullam KE, Hu Y, Basinger U,Mott BM, Buck N, Wheeler DE. 2012. Highly similar microbial communities are shared among related and trophically similar ant species. Molecular Ecology 21:2282-2296
-
(2012)
Molecular Ecology
, vol.21
, pp. 2282-2296
-
-
Anderson, K.E.1
Russell, J.A.2
Moreau, C.S.3
Kautz, S.4
Sullam, K.E.5
Hu, Y.6
Basinger, U.7
Mott, B.M.8
Buck, N.9
Wheeler, D.E.10
-
3
-
-
15544369658
-
Host-bacterial mutualism in the human intestine
-
B̈ackhed F, Ley R, Sonnenburg J, Peterson D, Gordon J. 2005. Host-bacterial mutualism in the human intestine. Science 307:1915-1920
-
(2005)
Science
, vol.307
, pp. 1915-1920
-
-
B̈ackhed, F.1
Ley, R.2
Sonnenburg, J.3
Peterson, D.4
Gordon, J.5
-
4
-
-
77951879125
-
Photoperiod modulates gut bacteria composition in male Siberian hamsters Phodopus sungorus
-
Bailey MT,Walton JC, Dowd SE,Weil ZM, Nelson RJ. 2010. Photoperiod modulates gut bacteria composition in male Siberian hamsters Phodopus sungorus. Brain, Behavior, and Immunity 24:577-584
-
(2010)
Brain, Behavior, and Immunity
, vol.24
, pp. 577-584
-
-
Bailey, M.T.1
Walton, J.C.2
Dowd, S.E.3
Weil, Z.M.4
Nelson, R.J.5
-
6
-
-
78449296237
-
Individuality in gut microbiota composition is a complex polygenic trait shaped bymultiple environmental and host genetic factors
-
Benson AK, Kelly SA, Legge R,Ma F, Low SJ, Kim J, Zhang M, Oh PL, Nehrenberg D, Hua K, Kachman SD,Moriyama EN,Walter J, Peterson DA, Pomp D. 2010. Individuality in gut microbiota composition is a complex polygenic trait shaped bymultiple environmental and host genetic factors. Proceedings of the National Academy of Sciences of the United States of America 107:18933-18938
-
(2010)
Proceedings of the National Academy of Sciences of the United States of America
, vol.107
, pp. 18933-18938
-
-
Benson, A.K.1
Kelly, S.A.2
Legge, R.3
Ma, F.4
Low, S.J.5
Kim, J.6
Zhang, M.7
Oh, P.L.8
Nehrenberg, D.9
Hua, K.10
Kachman, S.D.11
Moriyama, E.N.12
Walter, J.13
Peterson, D.A.14
Pomp, D.15
-
7
-
-
84881225406
-
The hologenomic basis of speciation: gut bacteria cause hybrid lethality in the genus Nasonia
-
Brucker RM, Bordenstein SR. 2013. The hologenomic basis of speciation: gut bacteria cause hybrid lethality in the genus Nasonia. Science 341:667-669
-
(2013)
Science
, vol.341
, pp. 667-669
-
-
Brucker, R.M.1
Bordenstein, S.R.2
-
8
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, Costello EK, Fierer N, Pe{ogonek}na AG, Goodrich JK, Gordon JI, Huttley GA, Kelley ST, Knights D, Koenig JE, Ley RE, Lozupone CA,Mcdonald D,Muegge BD, Pirrung M, Reeder J, Sevinsky JR, Turnbaugh PJ, WaltersWA,Widmann J, Yatsunenko T, Zaneveld J, Knight R. 2010. QIIME allows analysis of high-throughput community sequencing data. Nature Methods 7:335-336
-
(2010)
Nature Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
Costello, E.K.6
Fierer, N.7
Pena, A.G.8
Goodrich, J.K.9
Gordon, J.I.10
Huttley, G.A.11
Kelley, S.T.12
Knights, D.13
Koenig, J.E.14
Ley, R.E.15
Lozupone, C.A.16
Mcdonald, D.17
Muegge, B.D.18
Pirrung, M.19
Reeder, J.20
Sevinsky, J.R.21
Turnbaugh, P.J.22
Walters, W.A.23
Widmann, J.24
Yatsunenko, T.25
Zaneveld, J.26
Knight, R.27
more..
-
9
-
-
84864722033
-
Gut microbiota composition correlates with diet and health in the elderly
-
Claesson MJ, Je??ery IB, Conde S, Power SE, O'Connor EM, Cusack S, Harris HMB, Coakley M, Lakshminarayanan B, O'Sullivan O, Fitzgerald GF, Deane J, O'Connor M, Harnedy N, O'Connor K, O'Mahony D, van Sinderen D,Wallace M, Brennan L, Stanton C,Marchesi JR, Fitzgerald AP, Shanahan F, Hill C, Ross RP, O'Toole PW. 2012. Gut microbiota composition correlates with diet and health in the elderly. Nature 488:178-184
-
(2012)
Nature
, vol.488
, pp. 178-184
-
-
Claesson, M.J.1
Jeffery, I.B.2
Conde, S.3
Power, S.E.4
O'Connor, E.M.5
Cusack, S.6
Harris, H.M.B.7
Coakley, M.8
Lakshminarayanan, B.9
O'Sullivan, O.10
Fitzgerald, G.F.11
Deane, J.12
O'Connor, M.13
Harnedy, N.14
O'Connor, K.15
O'Mahony, D.16
van Sinderen, D.17
Wallace, M.18
Brennan, L.19
Stanton, C.20
Marchesi, J.R.21
Fitzgerald, A.P.22
Shanahan, F.23
Hill, C.24
Ross, R.P.25
O'Toole, P.W.26
more..
-
10
-
-
0027804103
-
Non- parametric multivariate analysis of changes in community structure
-
Clarke KR. 1993. Non-parametric multivariate analysis of changes in community structure Australian Journal of Ecology 18:117-143
-
(1993)
Australian Journal of Ecology
, vol.18
, pp. 117-143
-
-
Clarke, K.R.1
-
11
-
-
5644227319
-
Impact of 16S rRNA gene sequence analysis for identification of bacteria on clinical microbiology and infectious diseases
-
Clarridge III JE. 2004. Impact of 16S rRNA gene sequence analysis for identification of bacteria on clinical microbiology and infectious diseases. Clinical Microbiology Reviews 17:840-862
-
(2004)
Clinical Microbiology Reviews
, vol.17
, pp. 840-862
-
-
Clarridge III, J.E.1
-
12
-
-
84858376593
-
The impact of the gut microbiota on human health: an integrative view
-
Clemente JC, Ursell LK, Parfrey LW, Knight R. 2012. The impact of the gut microbiota on human health: an integrative view. Cell 148:1258-1270
-
(2012)
Cell
, vol.148
, pp. 1258-1270
-
-
Clemente, J.C.1
Ursell, L.K.2
Parfrey, L.W.3
Knight, R.4
-
14
-
-
18444396926
-
Incubation reduces microbial growth on eggshells and the opportunity for trans-shell infection
-
Cook MI, Beissinger SR, Toranzos GA, Arendt WJ. 2005. Incubation reduces microbial growth on eggshells and the opportunity for trans-shell infection. Ecology Letters 8:532-537
-
(2005)
Ecology Letters
, vol.8
, pp. 532-537
-
-
Cook, M.I.1
Beissinger, S.R.2
Toranzos, G.A.3
Arendt, W.J.4
-
16
-
-
84897921191
-
Interspecific variations in the gastrointestinal microbiota in penguins
-
Dewar ML, Arnould JPY, Dann P, Trathan P, Groscolas R, Smith S. 2013. Interspecific variations in the gastrointestinal microbiota in penguins. MicrobiologyOpen 2:195-204
-
(2013)
MicrobiologyOpen
, vol.2
, pp. 195-204
-
-
Dewar, M.L.1
Arnould, J.P.Y.2
Dann, P.3
Trathan, P.4
Groscolas, R.5
Smith, S.6
-
17
-
-
80053410384
-
The human microbiota as a marker for migrations of individuals and populations
-
Dominguez-Bello MG, Blaser M. 2011. The human microbiota as a marker for migrations of individuals and populations. Annual Review of Anthropology 40:451-474
-
(2011)
Annual Review of Anthropology
, vol.40
, pp. 451-474
-
-
Dominguez-Bello, M.G.1
Blaser, M.2
-
18
-
-
78149429458
-
Microbiome profiling by illumina sequencing of combinatorial sequence-tagged PCR products
-
Gloor GB, Hummelen R,Macklaim JM, Dickson RJ, Fernandes AD,MacPhee R, Reid G. 2010 Microbiome profiling by illumina sequencing of combinatorial sequence-tagged PCR products PLoS ONE 5(10):e15406
-
(2010)
PLoS ONE
, vol.5
, Issue.10
, pp. 15406
-
-
Gloor, G.B.1
Hummelen, R.2
Macklaim, J.M.3
Dickson, R.J.4
Fernandes, A.D.5
MacPhee, R.6
Reid, G.7
-
19
-
-
77951498226
-
Developmental microbial ecology of the crop of the folivorous hoatzin
-
Godoy-Vitorino F, Goldfarb KC, Brodie EL, Garcia-Amado MA,Michelangeli F, Domínguez-Bello MG. 2010. Developmental microbial ecology of the crop of the folivorous hoatzin. The ISME Journal 4:611-620
-
(2010)
The ISME Journal
, vol.4
, pp. 611-620
-
-
Godoy-Vitorino, F.1
Goldfarb, K.C.2
Brodie, E.L.3
Garcia-Amado, M.A.4
Michelangeli, F.5
Domínguez-Bello, M.G.6
-
20
-
-
84859438422
-
Differences in crop bacterial community structure between hoatzins from different geographical locations
-
Godoy-Vitorino F, Leal SJ, DíazWA, Rosales J, Goldfarb KC, García-Amado MA, Michelangeli F, Brodie EL, Domínguez-Bello MG. 2012. Differences in crop bacterial community structure between hoatzins from different geographical locations. Research in Microbiology 163:211-220
-
(2012)
Research in Microbiology
, vol.163
, pp. 211-220
-
-
Godoy-Vitorino, F.1
Leal, S.J.2
Díaz, W.A.3
Rosales, J.4
Goldfarb, K.C.5
García-Amado, M.A.6
Michelangeli, F.7
Brodie, E.L.8
Domínguez-Bello, M.G.9
-
21
-
-
37649025929
-
The ecodist package for dissimilarity-based analysis of ecological data
-
Goslee SC, Urban DL. 2007. The ecodist package for dissimilarity-based analysis of ecological data. Journal of Statistical Software 22:1-19
-
(2007)
Journal of Statistical Software
, vol.22
, pp. 1-19
-
-
Goslee, S.C.1
Urban, D.L.2
-
23
-
-
79955575432
-
Heightened exposure to parasites favors the evolution of immunity in brood parasitic cowbirds
-
Hahn C, Reisen WK. 2011. Heightened exposure to parasites favors the evolution of immunity in brood parasitic cowbirds. Evolutionary Biology 38:214-224
-
(2011)
Evolutionary Biology
, vol.38
, pp. 214-224
-
-
Hahn, C.1
Reisen, W.K.2
-
24
-
-
84872348631
-
Life history trade-offs between longevity and immunity in the parasitic brown-headed Cowbird?
-
Hahn DC, Smith GW. 2011. Life history trade-offs between longevity and immunity in the parasitic brown-headed Cowbird? Open Evolution Journal 5:8-13
-
(2011)
Open Evolution Journal
, vol.5
, pp. 8-13
-
-
Hahn, D.C.1
Smith, G.W.2
-
25
-
-
79952601424
-
Normal gut microbiota modulates brain development and behavior
-
Heijtz RD,Wang S, Anuar F, Qian Y, Bjorkholm B, Samuelsson A, Hibberd ML, Forssberg H, Pettersson S. 2011. Normal gut microbiota modulates brain development and behavior Proceedings of the National Academy of Sciences of the United States of America 108:3047-3052
-
(2011)
Proceedings of the National Academy of Sciences of the United States of America
, vol.108
, pp. 3047-3052
-
-
Heijtz, R.D.1
Wang, S.2
Anuar, F.3
Qian, Y.4
Bjorkholm, B.5
Samuelsson, A.6
Hibberd, M.L.7
Forssberg, H.8
Pettersson, S.9
-
26
-
-
5044240973
-
Bellerophon: a program to detect chimeric sequences in multiple sequence alignments
-
Huber T, Faulkner G, Hugenholtz P. 2004. Bellerophon: a program to detect chimeric sequences in multiple sequence alignments. Bioinformatics 20:2317-2319
-
(2004)
Bioinformatics
, vol.20
, pp. 2317-2319
-
-
Huber, T.1
Faulkner, G.2
Hugenholtz, P.3
-
27
-
-
3843144881
-
Brood parasitic cowbird nestlings use host young to procure resources
-
Kilner RM,Madden JR, Hauber ME. 2004. Brood parasitic cowbird nestlings use host young to procure resources. Science 305:877-879
-
(2004)
Science
, vol.305
, pp. 877-879
-
-
Kilner, R.M.1
Madden, J.R.2
Hauber, M.E.3
-
28
-
-
51749116565
-
Cloacal microbial communities of female spotted towhees Pipilo maculatus: microgeographic variation and individual sources of variability
-
Klomp JE,Murphy MT, Smith SB,McKay JE, Ferrera I, Reysenbach AL. 2008. Cloacal microbial communities of female spotted towhees Pipilo maculatus: microgeographic variation and individual sources of variability. Journal of Avian Biology 39:530-538
-
(2008)
Journal of Avian Biology
, vol.39
, pp. 530-538
-
-
Klomp, J.E.1
Murphy, M.T.2
Smith, S.B.3
McKay, J.E.4
Ferrera, I.5
Reysenbach, A.L.6
-
29
-
-
84862651479
-
Diversity and function of the avian gut microbiota
-
Kohl KD. 2012. Diversity and function of the avian gut microbiota. Journal of Comparative Physiology B 182:591-602
-
(2012)
Journal of Comparative Physiology B
, vol.182
, pp. 591-602
-
-
Kohl, K.D.1
-
30
-
-
0029786578
-
Unsuitability of the house finch as a host of the brown-headed Cowbird
-
Kozlovic D, Knapton R, Barlow J. 1996. Unsuitability of the house finch as a host of the brown-headed Cowbird. The Condor 98:253-258
-
(1996)
The Condor
, vol.98
, pp. 253-258
-
-
Kozlovic, D.1
Knapton, R.2
Barlow, J.3
-
31
-
-
0011383567
-
An evaluation of the role of microbial flora in the salivary transfer technique for hand-rearing chimney swifts
-
Kyle P, Kyle G. 1993. An evaluation of the role of microbial flora in the salivary transfer technique for hand-rearing chimney swifts. Wildlife Rehabilitation 8:65-71
-
(1993)
Wildlife Rehabilitation
, vol.8
, pp. 65-71
-
-
Kyle, P.1
Kyle, G.2
-
32
-
-
82955205921
-
A comparison of the gut microbiota of healthy adult twins living Korea and United States
-
Lee S, Sung J, Lee J, Ko GP. 2011. A comparison of the gut microbiota of healthy adult twins living Korea and United States. Applied and Environmental Microbiology 77:7433-7437
-
(2011)
Applied and Environmental Microbiology
, vol.77
, pp. 7433-7437
-
-
Lee, S.1
Sung, J.2
Lee, J.3
Ko, G.P.4
-
33
-
-
46249085739
-
Evolution of mammals and their gut microbes
-
Ley R, Hamady M, Lozupone C, Turnbaugh P, Ramey R, Bircher J, Schlegel M, Tucker T, Schrenzel M, Knight R. 2008. Evolution of mammals and their gut microbes. Science 320:1647-1651
-
(2008)
Science
, vol.320
, pp. 1647-1651
-
-
Ley, R.1
Hamady, M.2
Lozupone, C.3
Turnbaugh, P.4
Ramey, R.5
Bircher, J.6
Schlegel, M.7
Tucker, T.8
Schrenzel, M.9
Knight, R.10
-
34
-
-
32944466887
-
Ecological and evolutionary forces shaping microbial diversity in the human intestine
-
Ley R, Peterson D, Gordon J. 2006. Ecological and evolutionary forces shaping microbial diversity in the human intestine. Cell 124:837-848
-
(2006)
Cell
, vol.124
, pp. 837-848
-
-
Ley, R.1
Peterson, D.2
Gordon, J.3
-
35
-
-
0002473246
-
Brown-headed Cowbird (Molothrus ater)
-
In: Poole A, Ithaca, New York: The Birds of North America Online
-
Lowther PE. 1993. Brown-headed Cowbird (Molothrus ater). In: Poole A, ed. The birds of North America, vol. 47. Ithaca, New York: The Birds of North America Online
-
(1993)
The birds of North America
, vol.47
-
-
Lowther, P.E.1
-
36
-
-
84856405017
-
Lists of victims and hosts of the parasitic cowbirds (Molothrus)
-
Available at
-
Lowther PE. 2013. Lists of victims and hosts of the parasitic cowbirds (Molothrus) Available at http://fieldmuseum.org/explore/brood-parasitism-host-lists
-
(2013)
-
-
Lowther, P.E.1
-
37
-
-
29144464937
-
UniFrac: a new phylogenetic method for comparing microbial communities
-
Lozupone C, Knight R. 2005. UniFrac: a new phylogenetic method for comparing microbial communities. Applied and Environmental Microbiology 71:8228-8235
-
(2005)
Applied and Environmental Microbiology
, vol.71
, pp. 8228-8235
-
-
Lozupone, C.1
Knight, R.2
-
38
-
-
84866146940
-
Diversity, stability and resilience of the human gut microbiota
-
Lozupone CA, Stombaugh JI, Gordon JI, Jansson JK, Knight R. 2012. Diversity, stability and resilience of the human gut microbiota. Nature 489:220-230
-
(2012)
Nature
, vol.489
, pp. 220-230
-
-
Lozupone, C.A.1
Stombaugh, J.I.2
Gordon, J.I.3
Jansson, J.K.4
Knight, R.5
-
39
-
-
28044443840
-
Environmental factors shape cloacal bacterial assemblages in great tit Parus major and blue tit P. caeruleus nestlings
-
Lucas FS, Heeb P. 2005. Environmental factors shape cloacal bacterial assemblages in great tit Parus major and blue tit P. caeruleus nestlings. Journal of Avian Biology 36:510-516
-
(2005)
Journal of Avian Biology
, vol.36
, pp. 510-516
-
-
Lucas, F.S.1
Heeb, P.2
-
40
-
-
0035133496
-
Fitting multivariate models to community data: a comment on distance-based redundancy analysis
-
McArdle BH, Anderson MJ. 2001. Fitting multivariate models to community data: a comment on distance-based redundancy analysis. Ecology 82:290-297
-
(2001)
Ecology
, vol.82
, pp. 290-297
-
-
McArdle, B.H.1
Anderson, M.J.2
-
41
-
-
0042424907
-
Beneficial effects of cloacal bacteria on growth and fledging size in nestling pied flycatchers (Ficedula hypoleuca) in Spain
-
Moreno J, Briones V,Merino S, Ballesteros C, Sanz JJ, Tomás G, Brittingham M. 2003. Beneficial effects of cloacal bacteria on growth and fledging size in nestling pied flycatchers (Ficedula hypoleuca) in Spain. Auk 120:784-790
-
(2003)
Auk
, vol.120
, pp. 784-790
-
-
Moreno, J.1
Briones, V.2
Merino, S.3
Ballesteros, C.4
Sanz, J.J.5
Tomás, G.6
Brittingham, M.7
-
42
-
-
79956301905
-
Diet drives convergence in gut microbiome functions across mammalian phylogeny and within humans
-
Muegge B, Kuczynski J, Knights D, Clemente J, Gonzalez A, Fontana L, Henrissat B, Knight R, Gordon J. 2011. Diet drives convergence in gut microbiome functions across mammalian phylogeny and within humans. Science 332:970-974
-
(2011)
Science
, vol.332
, pp. 970-974
-
-
Muegge, B.1
Kuczynski, J.2
Knights, D.3
Clemente, J.4
Gonzalez, A.5
Fontana, L.6
Henrissat, B.7
Knight, R.8
Gordon, J.9
-
43
-
-
78649978358
-
Evolutionary relationships of wild hominids recapitulated by gut microbial communities
-
Ochman H,Worobey M, Kuo C-H, Ndjango J-BN, Peeters M, Hahn BH, Hugenholtz P. 2010 Evolutionary relationships of wild hominids recapitulated by gut microbial communities. PLoS Biology 8:e1000546
-
(2010)
PLoS Biology
, vol.8
-
-
Ochman, H.1
Worobey, M.2
Kuo, C.-H.3
Ndjango, J.-B.N.4
Peeters, M.5
Hahn, B.H.6
Hugenholtz, P.7
-
44
-
-
70349255569
-
-
R package version 2.0-2. Available at
-
Oksanen J, Blanchet FG, Kindt R, Legendre P,Minchin PR, O'Hara RB, Simpson GL, Solymos P, Stevens MHH,Wagner H. 2011. Vegan: community ecology package, R package version 2.0-2. Available at http://CRAN.R-project.org/package=vegan
-
(2011)
Vegan: community ecology package
-
-
Oksanen, J.1
Blanchet, F.G.2
Kindt, R.3
Legendre, P.4
Minchin, P.R.5
O'Hara, R.B.6
Simpson, G.L.7
Solymos, P.8
Stevens, M.H.H.9
Wagner, H.10
-
46
-
-
0001447735
-
Differential growth patterns of nestling brown-headed cowbirds and yellow-headed blackbirds
-
Ortega C, Cruz A. 1992. Differential growth patterns of nestling brown-headed cowbirds and yellow-headed blackbirds. The Auk 109:368-376
-
(1992)
The Auk
, vol.109
, pp. 368-376
-
-
Ortega, C.1
Cruz, A.2
-
47
-
-
67649327176
-
FastTree: computing large minimum-evolution trees with profiles instead of a distance matrix
-
Price MN, Dehal PS, Arkin AP. 2009. FastTree: computing large minimum-evolution trees with profiles instead of a distance matrix. Molecular Biology and Evolution 26:1641-1650
-
(2009)
Molecular Biology and Evolution
, vol.26
, pp. 1641-1650
-
-
Price, M.N.1
Dehal, P.S.2
Arkin, A.P.3
-
49
-
-
84897936034
-
-
R., Development Core, Team.R a language for statistical computing. R Foundation for Statistical Computing, Vienna, Austria
-
R Development Core Team. 2010. R: a language for statistical computing. R Foundation for Statistical Computing, Vienna, Austria
-
(2010)
-
-
-
50
-
-
70450057007
-
Symbiotic bacteria living in the hoopoe's uropygial gland prevent feather degradation
-
Ruiz-Rodriguez M, Valdivia E, Soler JJ,Martin-Vivaldi M,Martin-Platero AM,Martinez-Bueno M. 2009a. Symbiotic bacteria living in the hoopoe's uropygial gland prevent feather degradation. Journal of Experimental Biology 212:3621-3626
-
(2009)
Journal of Experimental Biology
, vol.212
, pp. 3621-3626
-
-
Ruiz-Rodriguez, M.1
Valdivia, E.2
Soler, J.J.3
Martin-Vivaldi, M.4
Martin-Platero, A.M.5
Martinez-Bueno, M.6
-
52
-
-
15444362001
-
Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness
-
Schloss PD, Handelsman J. 2005. Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness. Applied and Environmental Microbiology 71:1501-1506
-
(2005)
Applied and Environmental Microbiology
, vol.71
, pp. 1501-1506
-
-
Schloss, P.D.1
Handelsman, J.2
-
53
-
-
72949107142
-
Introducing mothur: open-source, platform-independent, communitysupported software for describing and comparing microbial communities
-
Schloss PD,Westcott SL, Ryabin T, Hall JR, Hartmann M, Hollister EB, Lesniewski RA, Oakley BB, Parks DH, Robinson CJ, Sahl JW, Stres B, Thallinger GG, Van Horn DJ, Weber CF. 2009. Introducing mothur: open-source, platform-independent, communitysupported software for describing and comparing microbial communities. Applied and Environmental Microbiology 75:7537-7541
-
(2009)
Applied and Environmental Microbiology
, vol.75
, pp. 7537-7541
-
-
Schloss, P.D.1
Westcott, S.L.2
Ryabin, T.3
Hall, J.R.4
Hartmann, M.5
Hollister, E.B.6
Lesniewski, R.A.7
Oakley, B.B.8
Parks, D.H.9
Robinson, C.J.10
Sahl, J.W.11
Stres, B.12
Thallinger, G.G.13
Van Horn, D.J.14
Weber, C.F.15
-
54
-
-
33947211934
-
Succession in the intestinal microbiota of preadolescent turkeys
-
Scupham A. 2007. Succession in the intestinal microbiota of preadolescent turkeys. FEMS Microbiology Ecology 60:136-147
-
(2007)
FEMS Microbiology Ecology
, vol.60
, pp. 136-147
-
-
Scupham, A.1
-
55
-
-
66249147890
-
Campylobacter colonization of the turkey intestine in the context of microbial community development
-
Scupham A. 2009. Campylobacter colonization of the turkey intestine in the context of microbial community development. Applied and Environmental Microbiology 75:3564-3571
-
(2009)
Applied and Environmental Microbiology
, vol.75
, pp. 3564-3571
-
-
Scupham, A.1
-
57
-
-
78650534387
-
Commensal bacteria play a role in mating preference of Drosophila melanogaster
-
Sharon G, Segal D, Ringo JM, Hefetz A, Zilber-Rosenberg I, Rosenberg E. 2010. Commensal bacteria play a role in mating preference of Drosophila melanogaster. Proceedings of the National Academy of Sciences of the United States of America 107:20051-20056
-
(2010)
Proceedings of the National Academy of Sciences of the United States of America
, vol.107
, pp. 20051-20056
-
-
Sharon, G.1
Segal, D.2
Ringo, J.M.3
Hefetz, A.4
Zilber-Rosenberg, I.5
Rosenberg, E.6
-
58
-
-
0023528912
-
A comparative study of eggshell thickness in cowbirds and other passerines
-
Spaw CD, Rohwer S. 1987. A comparative study of eggshell thickness in cowbirds and other passerines. The Condor 89:307-318
-
(1987)
The Condor
, vol.89
, pp. 307-318
-
-
Spaw, C.D.1
Rohwer, S.2
-
59
-
-
77952158672
-
Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins
-
Turnbaugh PJ, Quince C, Faith JJ,Mchardy AC, Yatsunenko T, Niazi F, A??ourtit J, Egholm M, Henrissat B, Knight R, Gordon JI. 2010. Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins. Proceedings of the National Academy of Sciences of the United States of America 107:7503-7508
-
(2010)
Proceedings of the National Academy of Sciences of the United States of America
, vol.107
, pp. 7503-7508
-
-
Turnbaugh, P.J.1
Quince, C.2
Faith, J.J.3
Mchardy, A.C.4
Yatsunenko, T.5
Niazi, F.6
Affourtit, J.7
Egholm, M.8
Henrissat, B.9
Knight, R.10
Gordon, J.I.11
-
60
-
-
77957979642
-
Comparative metagenomics and population dynamics of the gut microbiota in mother and infant
-
Vaishampayan PA, Kuehl JV, Froula JL,Morgan JL, Ochman H, Francino MP. 2010 Comparative metagenomics and population dynamics of the gut microbiota in mother and infant. Genome Biology and Evolution 2:53-66
-
(2010)
Genome Biology and Evolution
, vol.2
, pp. 53-66
-
-
Vaishampayan, P.A.1
Kuehl, J.V.2
Froula, J.L.3
Morgan, J.L.4
Ochman, H.5
Francino, M.P.6
-
61
-
-
84875301338
-
Age-related differences in the cloacal microbiota of a wild bird species
-
van Dongen W,White J, Brandl H,Moodley Y,Merkling T, Leclaire S, Blanchard P, Danchin É, Hatch S,Wagner R. 2013. Age-related differences in the cloacal microbiota of a wild bird species. BMC Ecology 13:11
-
(2013)
BMC Ecology
, vol.13
, pp. 11
-
-
van Dongen, W.1
White, J.2
Brandl, H.3
Moodley, Y.4
Merkling, T.5
Leclaire, S.6
Blanchard, P.7
Danchin, É.8
Hatch, S.9
Wagner, R.10
-
62
-
-
80051856839
-
The human gut microbiome: ecology and recent evolutionary changes
-
Walter J, Ley R. 2011. The human gut microbiome: ecology and recent evolutionary changes Annual Review of Microbiology 65:411-429
-
(2011)
Annual Review of Microbiology
, vol.65
, pp. 411-429
-
-
Walter, J.1
Ley, R.2
-
63
-
-
34548293679
-
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
-
Wang Q, Garrity G, Tiedje JM, Cole JR. 2007. Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Applied and Environmental Microbiology 73:5261-5267
-
(2007)
Applied and Environmental Microbiology
, vol.73
, pp. 5261-5267
-
-
Wang, Q.1
Garrity, G.2
Tiedje, J.M.3
Cole, J.R.4
-
65
-
-
49649111434
-
Role of microorganisms in the evolution of animals and plants: the hologenome theory of evolution
-
Zilber-Rosenberg I, Rosenberg E. 2008. Role of microorganisms in the evolution of animals and plants: the hologenome theory of evolution. FEMS Microbiology Reviews 32:723-735
-
(2008)
FEMS Microbiology Reviews
, vol.32
, pp. 723-735
-
-
Zilber-Rosenberg, I.1
Rosenberg, E.2
-
66
-
-
0034814007
-
The host genotype affects the bacterial community in the human gastronintestinal tract
-
Zoetendal EG, Akkermans ADL, Akkermans-van Vliet WM, de Visser JAGM, de Vos WM. 2001 The host genotype affects the bacterial community in the human gastronintestinal tract Microbial Ecology in Health and Disease 13:129-134
-
(2001)
Microbial Ecology in Health and Disease
, vol.13
, pp. 129-134
-
-
Zoetendal, E.G.1
Akkermans, A.D.L.2
Akkermans-van Vliet, W.M.3
de Visser, J.A.G.M.4
de Vos, W.M.5
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