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Volumn 64, Issue PART 4, 2014, Pages 1244-1251

Description of Thermogemmatispora carboxidivorans sp. nov., a carbon-monoxideoxidizing member of the class Ktedonobacteria isolated from a geothermally heated biofilm, and analysis of carbon monoxide oxidation by members of the class Ktedonobacteria

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; CARBON MONOXIDE; CARBOXYLIC ACID; CASEIN; FATTY ACID; MANNITOL; RHAMNOSE; RNA 16S; STARCH; XYLOSE;

EID: 84897945994     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.059675-0     Document Type: Article
Times cited : (64)

References (23)
  • 1
    • 0017758250 scopus 로고
    • A rapid method for the base ratio determination of bacterial DNA
    • Cashion, P., Holder-Franklin, M. A., McCully, J. & Franklin, M. (1977). A rapid method for the base ratio determination of bacterial DNA. Anal Biochem 81, 461-466.
    • (1977) Anal Biochem , vol.81 , pp. 461-466
    • Cashion, P.1    Holder-Franklin, M.A.2    McCully, J.3    Franklin, M.4
  • 3
    • 80054855179 scopus 로고    scopus 로고
    • Noncontiguous finished genome sequence and contextual data of the filamentous soil bacterium Ktedonobacter racemifer type strain (SOSP1-21)
    • Chang, Y. J., Land, M., Hauser, L., Chertkov, O., Del Rio, T. G., Nolan, M., Copeland, A., Tice, H., Cheng, J. F. & other authors (2011). Noncontiguous finished genome sequence and contextual data of the filamentous soil bacterium Ktedonobacter racemifer type strain (SOSP1-21). Stand Genomic Sci 5, 97-111.
    • (2011) Stand Genomic Sci , vol.5 , pp. 97-111
    • Chang, Y.J.1    Land, M.2    Hauser, L.3    Chertkov, O.4    Del Rio, T.G.5    Nolan, M.6    Copeland, A.7    Tice, H.8    Cheng, J.F.9
  • 4
    • 0014713693 scopus 로고
    • The quantitative measurement of DNA hybridization from renaturation rates
    • De Ley, J., Cattoir, H. & Reynaerts, A. (1970). The quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem 12, 133-142.
    • (1970) Eur J Biochem , vol.12 , pp. 133-142
    • De Ley, J.1    Cattoir, H.2    Reynaerts, A.3
  • 5
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • Edgar, R. C. (2004). MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32, 1792-1797.
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 6
    • 0020549589 scopus 로고
    • Studies on the spectrophotometric determination of DNA hybridization from renaturation rates
    • Huss, V. A. R., Festl, H. & Schleifer, K. H. (1983). Studies on the spectrophotometric determination of DNA hybridization from renaturation rates. Syst Appl Microbiol 4, 184-192.
    • (1983) Syst Appl Microbiol , vol.4 , pp. 184-192
    • Huss, V.A.R.1    Festl, H.2    Schleifer, K.H.3
  • 7
    • 0015796065 scopus 로고
    • Thermomicrobium, a new genus of thermophilic bacteria
    • Jackson, T. J. (1973). Thermomicrobium, a new genus of thermophilic bacteria. Int J Sys Bacteriol 23, 28-36.
    • (1973) Int J Sys Bacteriol , vol.23 , pp. 28-36
    • Jackson, T.J.1
  • 8
    • 0001997922 scopus 로고    scopus 로고
    • Characteristics and significance of atmospheric carbon monoxide consumption by soils
    • King, G. M. (1999). Characteristics and significance of atmospheric carbon monoxide consumption by soils. Chemosphere-Glob Chang Sci 1, 53-63.
    • (1999) Chemosphere-Glob Chang Sci , vol.1 , pp. 53-63
    • King, G.M.1
  • 9
    • 2142693754 scopus 로고    scopus 로고
    • Molecular and culture-based analyses of aerobic carbon monoxide oxidizer diversity
    • King, G. M. (2003). Molecular and culture-based analyses of aerobic carbon monoxide oxidizer diversity. Appl Environ Microbiol 69, 7257-7265.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 7257-7265
    • King, G.M.1
  • 10
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing
    • In, Edited by E. Stackebrandt & M. Goodfellow. Chichester: Wiley
    • Lane, D. J. (1991). 16S/23S rRNA sequencing. In Nucleic Acid Techniques in Bacterial Systematics, pp. 115-175. Edited by E. Stackebrandt & M. Goodfellow. Chichester: Wiley.
    • (1991) Nucleic Acid Techniques in Bacterial Systematics , pp. 115-175
    • Lane, D.J.1
  • 11
    • 0000198211 scopus 로고
    • Precise measurement of the G+C content of deoxyribonucleic acid by high performance liquid chromatography
    • Mesbah, M., Premachandran, U. & Whitman, W. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by high performance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 159-167
    • Mesbah, M.1    Premachandran, U.2    Whitman, W.3
  • 12
    • 0017806087 scopus 로고
    • Reisolation of the carbon monoxide utilizing hydrogen bacterium Pseudomonas carboxydovorans (Kistner) comb. nov
    • Meyer, O. & Schlegel, H. G. (1978). Reisolation of the carbon monoxide utilizing hydrogen bacterium Pseudomonas carboxydovorans (Kistner) comb. nov. Arch Microbiol 118, 35-43.
    • (1978) Arch Microbiol , vol.118 , pp. 35-43
    • Meyer, O.1    Schlegel, H.G.2
  • 13
    • 84864134721 scopus 로고    scopus 로고
    • SINA: Accurate highthroughput multiple sequence alignment of ribosomal RNA genes
    • Pruesse, E., Peplies, J. & Glöckner, F. O. (2012). SINA: accurate highthroughput multiple sequence alignment of ribosomal RNA genes. Bioinformatics 28, 1823-1829.
    • (2012) Bioinformatics , vol.28 , pp. 1823-1829
    • Pruesse, E.1    Peplies, J.2    Glöckner, F.O.3
  • 15
    • 3242782680 scopus 로고    scopus 로고
    • Liquid serial dilution is inferior to solid media for isolation of cultures representative of the phylum-level diversity of soil bacteria
    • Schoenborn, L., Yates, P. S., Grinton, B. E., Hugenholtz, P. & Janssen, P. H. (2004). Liquid serial dilution is inferior to solid media for isolation of cultures representative of the phylum-level diversity of soil bacteria. Appl Environ Microbiol 70, 4363-4366.
    • (2004) Appl Environ Microbiol , vol.70 , pp. 4363-4366
    • Schoenborn, L.1    Yates, P.S.2    Grinton, B.E.3    Hugenholtz, P.4    Janssen, P.H.5
  • 16
    • 0000612080 scopus 로고
    • Phenotypic characterization
    • In, Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology
    • Smibert, R. M. & Krieg, N. L. (1994). Phenotypic characterization. In Methods for General and Molecular Bacteriology, pp. 607-654. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
    • (1994) Methods for General and Molecular Bacteriology , pp. 607-654
    • Smibert, R.M.1    Krieg, N.L.2
  • 17
    • 0019760524 scopus 로고
    • Bryophytes and lichens of the Puhimau Geothermal Area, Hawaii Volcanoes National Park
    • Smith, C. W. (1981). Bryophytes and lichens of the Puhimau Geothermal Area, Hawaii Volcanoes National Park. Bryologist 84, 457-466.
    • (1981) Bryologist , vol.84 , pp. 457-466
    • Smith, C.W.1
  • 18
    • 55949124350 scopus 로고    scopus 로고
    • Isolation of novel bacteria, including a candidate division, from geothermal soils in New Zealand
    • Stott, M. B., Crowe, M. A., Mountain, B. W., Smirnova, A. V., Hou, S., Alam, M. & Dunfield, P. F. (2008). Isolation of novel bacteria, including a candidate division, from geothermal soils in New Zealand. Environ Microbiol 10, 2030-2041.
    • (2008) Environ Microbiol , vol.10 , pp. 2030-2041
    • Stott, M.B.1    Crowe, M.A.2    Mountain, B.W.3    Smirnova, A.V.4    Hou, S.5    Alam, M.6    Dunfield, P.F.7
  • 19
    • 0021715576 scopus 로고
    • Determination of DNA base composition by reversed-phase high-performance liquid chromatography
    • Tamaoka, J. & Komagata, K. (1984). Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol Lett 25, 125-128.
    • (1984) FEMS Microbiol Lett , vol.25 , pp. 125-128
    • Tamaoka, J.1    Komagata, K.2
  • 20
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M. & Kumar, S. (2011). MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28, 2731-2739.
    • (2011) Mol Biol Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 21
    • 84863429736 scopus 로고    scopus 로고
    • A novel fatty acid, 12,17-dimethyloctadecanoic acid, from the extremophile Thermogemmatispora sp. (strain T81)
    • Vyssotski, M., Ryan, J., Lagutin, K., Wong, H., Morgan, X. & Stott, M. (2012). A novel fatty acid, 12,17-dimethyloctadecanoic acid, from the extremophile Thermogemmatispora sp. (strain T81). Lipids 47, 601-611.
    • (2012) Lipids , vol.47 , pp. 601-611
    • Vyssotski, M.1    Ryan, J.2    Lagutin, K.3    Wong, H.4    Morgan, X.5    Stott, M.6
  • 22
    • 77955639024 scopus 로고    scopus 로고
    • Thermosporothrix hazakensis gen. nov., sp. nov., isolated from compost, description of Thermosporotrichaceae fam. nov. within the class Ktedonobacteria Cavaletti et al. 2007 and emended description of the class Ktedonobacteria
    • Yabe, S., Aiba, Y., Sakai, Y., Hazaka, M. & Yokota, A. (2010). Thermosporothrix hazakensis gen. nov., sp. nov., isolated from compost, description of Thermosporotrichaceae fam. nov. within the class Ktedonobacteria Cavaletti et al. 2007 and emended description of the class Ktedonobacteria. Int J Syst Evol Microbiol 60, 1794-1801.
    • (2010) Int J Syst Evol Microbiol , vol.60 , pp. 1794-1801
    • Yabe, S.1    Aiba, Y.2    Sakai, Y.3    Hazaka, M.4    Yokota, A.5
  • 23
    • 79551485935 scopus 로고    scopus 로고
    • Thermogemmatispora onikobensis gen. nov., sp. nov. and Thermogemmatispora foliorum sp. nov., isolated from fallen leaves on geothermal soils, and description of Thermogemmatisporaceae fam. nov. and Thermogemmatisporales ord. nov. within the class Ktedonobacteria
    • Yabe, S., Aiba, Y., Sakai, Y., Hazaka, M. & Yokota, A. (2011). Thermogemmatispora onikobensis gen. nov., sp. nov. and Thermogemmatispora foliorum sp. nov., isolated from fallen leaves on geothermal soils, and description of Thermogemmatisporaceae fam. nov. and Thermogemmatisporales ord. nov. within the class Ktedonobacteria. Int J Syst Evol Microbiol 61, 903-910.
    • (2011) Int J Syst Evol Microbiol , vol.61 , pp. 903-910
    • Yabe, S.1    Aiba, Y.2    Sakai, Y.3    Hazaka, M.4    Yokota, A.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.