Complete genome sequence of the actinobacterium Actinoplanes friuliensis HAG 010964, producer of the lipopeptide antibiotic friulimycin

Journal of Biotechnology

Volumn 178, Issue 1, 2014, Pages 41-42

  Rückert, Christian ^a   Szczepanowski, Rafael ^a   Albersmeier, Andreas ^a   Goesmann, Alexander ^a   Fischer, Nicole ^b   Steinkämper, Anne ^b   Pühler, Alfred ^a   Biener, Richard ^b   Schwartz, Dirk ^b   Kalinowski, Jörn ^a  

^a BIELEFELD UNIVERSITY   (Germany)

^b ESSLINGEN UNIVERSITY OF APPLIED SCIENCES   (Germany)

Author keywords

Antibiotics; DNA sequencing; Genome

Indexed keywords

BIOCHEMISTRY; DNA SEQUENCES; GENES; GENETIC ENGINEERING; ANTIBIOTICS; GENE ENCODING; METABOLITES;

COMPLETE GENOMES; DNA SEQUENCING; GENOMIC INFORMATION; LIPOPEPTIDES; SECONDARY METABOLITES; SOIL SAMPLE;

ANTIBIOTICS; GENES;

ANTIBIOTIC AGENT; BACTERIAL RNA; FRIULIMYCIN; RIBOSOME RNA; TRANSFER RNA; UNCLASSIFIED DRUG; LIPOPEPTIDE; ANTIINFECTIVE AGENT; FRIULIMICIN A; PEPTIDE;

ACTINOBACTERIA; ACTINOPLANES FRIULIENSIS; ARTICLE; BACTERIAL GENOME; BACTERIUM ISOLATION; GENE SEQUENCE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; BIOSYNTHESIS; GENOME; GENOMICS; ITALY; METABOLITE; NEXT GENERATION SEQUENCING; PYROSEQUENCING; SOIL; GENETICS; METABOLISM; MICROMONOSPORACEAE; MOLECULAR GENETICS;

ACTINOPLANES FRIULIENSIS;

ANTI-BACTERIAL AGENTS; GENOME, BACTERIAL; LIPOPEPTIDES; MICROMONOSPORACEAE; MOLECULAR SEQUENCE DATA; PEPTIDES;

EID: 84897862773     PISSN: 01681656     EISSN: 18734863     Source Type: Journal    
DOI: 10.1016/j.jbiotec.2014.03.011     Document Type: Article

References (10)

1. Aretz W., Meiwes J., Seibert G., Vobis G., Wink J. Friulimicins: novel lipopeptide antibiotics with peptidoglycan synthesis inhibiting activity from Actinoplanes friuliensis sp. nov I. Taxonomic studies of the producing microorganism and fermentation. J. Antibiot. (Tokyo) 2000, 53(8):807-815.
2. Gordon D. Viewing and editing assembled sequences using Consed. Curr. Protoc. Bioinform. 2003, (Chapter 11: Unit11 2).
3. Heinzelmann E., Berger S., Puk O., Reichenstein B., Wohlleben W., Schwartz D. A glutamate mutase is involved in the biosynthesis of the lipopeptide antibiotic friulimicin in Actinoplanes friuliensis. Antimicrob. Agents Chemother. 2003, 47(2):447-457.
4. Heinzelmann E., Berger S., Müller C., Härtner T., Poralla K., Wohlleben W., Schwartz D. An acyl-CoA dehydrogenase is involved in the formation of the Delta cis3 double bond in the acyl residue of the lipopeptide antibiotic friulimicin in Actinoplanes friuliensis. Microbiology 2005, 51(Pt 6):1963-1974.
5. Müller C., Nolden S., Gebhardt P., Heinzelmann E., Lange C., Puk O., Welzel K., Wohlleben W., Schwartz D. Sequencing and analysis of the biosynthetic gene cluster of the lipopeptide antibiotic Friulimicin in Actinoplanes friuliensis. Antimicrob. Agents Chemother. 2007, 51(3):1028-1037.
6. NCBI NCBI Prokaryotic Genomes Automatic Annotation Pipeline (PGAAP) 2010, http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html.
7. Nolden S., Wagner N., Biener R., Schwartz D. Analysis of RegA, a pathway-specific regulator of the friulimicin biosynthesis in Actinoplanes friuliensis. J. Biotechnol. 2009, 140(1/2):99-106.
8. Schneider T., Gries K., Josten M., Wiedemann I., Pelzer S., Labischinski H., Sahl H.G. The lipopeptide antibiotic Friulimicin B inhibits cell wall biosynthesis through complex formation with bactoprenol phosphate. Antimicrob. Agents Chemother. 2009, 53(4):1610-1618.
9. Schwientek P., Szczepanowski R., Rückert C., Stoye J., Pühler A. Sequencing of high G+C microbial genomes using the ultrafast pyrosequencing technology. J. Biotechnol. 2011, 155:68-77.
10. Vértesy L., Ehlers E., Kogler H., Kurz M., Meiwes J., Seibert G., Vogel M., Hammann P. Friulimicins: novel lipopeptide antibiotics with peptidoglycan synthesis inhibiting activity from Actinoplanes friuliensis sp. nov II. Isolation and structural characterization. J. Antibiot. (Tokyo) 2000, 53(8):816-827.