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Volumn 63, Issue PART 4, 2014, Pages 570-577

Molecular evolution of the haemagglutinin- neuraminidase gene in human parainfluenza virus type 3 isolates from children with acute respiratory illness in Yamagata prefecture, Japan

Author keywords

[No Author keywords available]

Indexed keywords

HEMAGGLUTININ; HN PROTEIN; SIALIDASE;

EID: 84897839354     PISSN: 00222615     EISSN: None     Source Type: Journal    
DOI: 10.1099/jmm.0.068189-0     Document Type: Article
Times cited : (26)

References (31)
  • 2
    • 72949085414 scopus 로고    scopus 로고
    • The common cold
    • 5th Edn Edited by R. D. Feigin, J. D. Cherry, G. J. Demmler & S. L. Kaplan. Philadelphia: Saunders
    • Cherry, J. D. (2003). The common cold. In: Textbook of Pediatric Infectious Diseases, 5th edn, pp. 140-146.Edited by R. D. Feigin, J. D. Cherry, G. J. Demmler & S. L. Kaplan. Philadelphia: Saunders.
    • (2003) Textbook of Pediatric Infectious Diseases , pp. 140-146
    • Cherry, J.D.1
  • 3
    • 38649110663 scopus 로고    scopus 로고
    • BEAST: Bayesian evolutionary analysis by sampling trees
    • Drummond, A. J. & Rambaut, A. (2007). BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol 7, 214.
    • (2007) BMC Evol Biol , vol.7 , pp. 214
    • Drummond, A.J.1    Rambaut, A.2
  • 4
    • 16544386250 scopus 로고    scopus 로고
    • Epidemiology of respiratory infections in young children: Insights from the new vaccine surveillance network
    • New Vaccine Surveillance Network Study Group
    • Griffin, M. R., Walker, F. J., Iwane, M. K., Weinberg, G. A., Staat, M. A., Erdman, D. D. &New Vaccine Surveillance Network Study Group (2004). Epidemiology of respiratory infections in young children: insights from the new vaccine surveillance network. Pediatr Infect Dis J 23 (Suppl.), S188-S192.
    • (2004) Pediatr Infect Dis J , vol.23 , Issue.SUPPL.
    • Griffin, M.R.1    Walker, F.J.2    Iwane, M.K.3    Weinberg, G.A.4    Staat, M.A.5    Erdman, D.D.6
  • 5
    • 0037396962 scopus 로고    scopus 로고
    • Parainfluenza viruses
    • Henrickson, K. J. (2003). Parainfluenza viruses. Clin Microbiol Rev 16, 242-264.
    • (2003) Clin Microbiol Rev , vol.16 , pp. 242-264
    • Henrickson, K.J.1
  • 6
    • 78549288227 scopus 로고    scopus 로고
    • Sequence and phylogenetic analyses of Saffold cardiovirus from children with exudative tonsillitis in Yamagata, Japan
    • Itagaki, T., Abiko, C., Ikeda, T., Aoki, Y., Seto, J., Mizuta, K., Ahiko, T., Tsukagoshi, H., Nagano, M. & other authors (2010). Sequence and phylogenetic analyses of Saffold cardiovirus from children with exudative tonsillitis in Yamagata, Japan. Scand J Infect Dis 42, 950- 952.
    • (2010) Scand J Infect Dis , vol.42 , pp. 950-952
    • Itagaki, T.1    Abiko, C.2    Ikeda, T.3    Aoki, Y.4    Seto, J.5    Mizuta, K.6    Ahiko, T.7    Tsukagoshi, H.8    Nagano, M.9
  • 8
    • 34547122346 scopus 로고    scopus 로고
    • Parainfluenza viruses
    • 5th edn, pp. 1497-1526. Edited by M. Knipe & P.M. Howley. Philadelphia: Lippincott Williams & Wilkins
    • Karron, R. A. & Collins, P. L. (2007). Parainfluenza viruses. In Fields Virology, 5th edn, pp. 1497-1526. Edited by M. Knipe & P.M. Howley. Philadelphia: Lippincott Williams & Wilkins.
    • (2007) In Fields Virology
    • Karron, R.A.1    Collins, P.L.2
  • 9
    • 34247500952 scopus 로고    scopus 로고
    • Early-life respiratory viral infections, atopic sensitization, and risk of subsequent development of persistent asthma
    • Kusel, M. M., de Klerk, N. H., Kebadze, T., Vohma, V., Holt, P. G., Johnston, S. L. & Sly, P. D. (2007). Early-life respiratory viral infections, atopic sensitization, and risk of subsequent development of persistent asthma. J Allergy Clin Immunol 119, 1105-1110.
    • (2007) J Allergy Clin Immunol , vol.119 , pp. 1105-1110
    • Kusel, M.M.1    de Klerk, N.H.2    Kebadze, T.3    Vohma, V.4    Holt, P.G.5    Johnston, S.L.6    Sly, P.D.7
  • 11
    • 37549001784 scopus 로고    scopus 로고
    • A general comparison of relaxed molecular clock models
    • Lepage, T., Bryant, D., Philippe, H. & Lartillot, N. (2007). A general comparison of relaxed molecular clock models. Mol Biol Evol 24, 2669-2680.
    • (2007) Mol Biol Evol , vol.24 , pp. 2669-2680
    • Lepage, T.1    Bryant, D.2    Philippe, H.3    Lartillot, N.4
  • 12
    • 84865522700 scopus 로고    scopus 로고
    • Human parainfluenza virusassociated respiratory tract infection among children and genetic analysis of HPIV-3 strains in Beijing, China
    • Mao, N., Ji, Y., Xie, Z., Wang, H., Wang, H., An, J., Zhang, X., Zhang, Y., Zhu, Z. & other authors (2012). Human parainfluenza virusassociated respiratory tract infection among children and genetic analysis of HPIV-3 strains in Beijing, China. PLoS ONE 7, e43893.
    • (2012) PLoS ONE , vol.7 , pp. 43893
    • Mao, N.1    Ji, Y.2    Xie, Z.3    Wang, H.4    Wang, H.5    An, J.6    Zhang, X.7    Zhang, Y.8    Zhu, Z.9
  • 13
    • 27544507363 scopus 로고    scopus 로고
    • Naturally occurring parainfluenza virus 3 infection in adults induces mild exacerbation of asthma associated with increased sputum concentrations of cysteinyl leukotrienes
    • Matsuse, H., Kondo, Y., Saeki, S., Nakata, H., Fukushima, C., Mizuta, Y. & Kohno, S. (2005). Naturally occurring parainfluenza virus 3 infection in adults induces mild exacerbation of asthma associated with increased sputum concentrations of cysteinyl leukotrienes. Int Arch Allergy Immunol 138, 267-272.
    • (2005) Int Arch Allergy Immunol , vol.138 , pp. 267-272
    • Matsuse, H.1    Kondo, Y.2    Saeki, S.3    Nakata, H.4    Fukushima, C.5    Mizuta, Y.6    Kohno, S.7
  • 14
    • 45849153523 scopus 로고    scopus 로고
    • Analysis of monthly isolation of respiratory viruses from children by cell culture using a microplate method: A two-year study from 2004 to 2005 in Yamagata, Japan
    • Mizuta, K., Abiko, C., Aoki, Y., Suto, A., Hoshina, H., Itagaki, T., Katsushima, N., Matsuzaki, Y., Hongo, S. & other authors (2008). Analysis of monthly isolation of respiratory viruses from children by cell culture using a microplate method: a two-year study from 2004 to 2005 in Yamagata, Japan. Jpn J Infect Dis 61, 196-201.
    • (2008) Jpn J Infect Dis , vol.61 , pp. 196-201
    • Mizuta, K.1    Abiko, C.2    Aoki, Y.3    Suto, A.4    Hoshina, H.5    Itagaki, T.6    Katsushima, N.7    Matsuzaki, Y.8    Hongo, S.9
  • 15
    • 72949123447 scopus 로고    scopus 로고
    • Phylogenetic and cluster analysis of human rhinovirus species A (HRV-A) isolated from children with acute respiratory infections in Yamagata, Japan
    • Mizuta, K., Hirata, A., Suto, A., Aoki, Y., Ahiko, T., Itagaki, T., Tsukagoshi, H., Morita, Y., Obuchi, M. & other authors (2010). Phylogenetic and cluster analysis of human rhinovirus species A (HRV-A) isolated from children with acute respiratory infections in Yamagata, Japan. Virus Res 147, 265-274.
    • (2010) Virus Res , vol.147 , pp. 265-274
    • Mizuta, K.1    Hirata, A.2    Suto, A.3    Aoki, Y.4    Ahiko, T.5    Itagaki, T.6    Tsukagoshi, H.7    Morita, Y.8    Obuchi, M.9
  • 16
    • 83255164916 scopus 로고    scopus 로고
    • Detailed genetic analysis of hemagglutinin-neuraminidase glycoprotein gene in human parainfluenza virus type 1 isolates from patients with acute respiratory infection between 2002 and 2009 in Yamagata prefecture, Japan
    • Mizuta, K., Saitoh, M., Kobayashi, M., Tsukagoshi, H., Aoki, Y., Ikeda, T., Abiko, C., Katsushima, N., Itagaki, T. & other authors (2011). Detailed genetic analysis of hemagglutinin-neuraminidase glycoprotein gene in human parainfluenza virus type 1 isolates from patients with acute respiratory infection between 2002 and 2009 in Yamagata prefecture, Japan. Virol J 8, 533.
    • (2011) Virol J , vol.8 , pp. 533
    • Mizuta, K.1    Saitoh, M.2    Kobayashi, M.3    Tsukagoshi, H.4    Aoki, Y.5    Ikeda, T.6    Abiko, C.7    Katsushima, N.8    Itagaki, T.9
  • 17
    • 22144445629 scopus 로고    scopus 로고
    • Entry of parainfluenza virus into cells as a target for interrupting childhood respiratory disease
    • Moscona, A. (2005). Entry of parainfluenza virus into cells as a target for interrupting childhood respiratory disease. J Clin Invest 115, 1688-1698.
    • (2005) J Clin Invest , vol.115 , pp. 1688-1698
    • Moscona, A.1
  • 18
    • 34548169552 scopus 로고    scopus 로고
    • Fusion promotion by a paramyxovirus hemagglutinin-neuraminidase protein: PH modulation of receptor avidity of binding sites I and II
    • Palermo, L. M., Porotto, M., Greengard, O. & Moscona, A. (2007). Fusion promotion by a paramyxovirus hemagglutinin-neuraminidase protein: pH modulation of receptor avidity of binding sites I and II. J Virol 81, 9152-9161.
    • (2007) J Virol , vol.81 , pp. 9152-9161
    • Palermo, L.M.1    Porotto, M.2    Greengard, O.3    Moscona, A.4
  • 19
    • 84863422771 scopus 로고    scopus 로고
    • Adaptation of human parainfluenza virus to airway epithelium reveals fusion properties required for growth in host tissue
    • Palmer, S. G., Porotto, M., Palermo, L. M., Cunha, L. F., Greengard, O. & Moscona, A. (2012). Adaptation of human parainfluenza virus to airway epithelium reveals fusion properties required for growth in host tissue. MBio 3, e00137-e12.
    • (2012) MBio , vol.3
    • Palmer, S.G.1    Porotto, M.2    Palermo, L.M.3    Cunha, L.F.4    Greengard, O.5    Moscona, A.6
  • 21
    • 17744395033 scopus 로고    scopus 로고
    • Datamonkey: Rapid detection of selective pressure on individual sites of codon alignments
    • Pond, S. L. & Frost, S. D. (2005). Datamonkey: rapid detection of selective pressure on individual sites of codon alignments. Bioinformatics 21, 2531-2533.
    • (2005) Bioinformatics , vol.21 , pp. 2531-2533
    • Pond, S.L.1    Frost, S.D.2
  • 22
    • 33947363286 scopus 로고    scopus 로고
    • A second receptor binding site on human parainfluenza virus type 3 hemagglutinin-neuraminidase contributes to activation of the fusion mechanism
    • Porotto, M., Fornabaio, M., Kellogg, G. E. & Moscona, A. (2007). A second receptor binding site on human parainfluenza virus type 3 hemagglutinin-neuraminidase contributes to activation of the fusion mechanism. J Virol 81, 3216-3228.
    • (2007) J Virol , vol.81 , pp. 3216-3228
    • Porotto, M.1    Fornabaio, M.2    Kellogg, G.E.3    Moscona, A.4
  • 23
    • 0030893879 scopus 로고    scopus 로고
    • Epidemiology and clinical impact of parainfluenza virus infections in otherwise healthy infants and young children, 5 years old
    • Reed, G., Jewett, P. H., Thompson, J., Tollefson, S. & Wright, P. F. (1997). Epidemiology and clinical impact of parainfluenza virus infections in otherwise healthy infants and young children, 5 years old. J Infect Dis 175, 807-813.
    • (1997) J Infect Dis , vol.175 , pp. 807-813
    • Reed, G.1    Jewett, P.H.2    Thompson, J.3    Tollefson, S.4    Wright, P.F.5
  • 24
    • 0003511305 scopus 로고    scopus 로고
    • Bronchiolitis and infectious asthma
    • 5th edn, Edited by R.D. Feigin, J. D. Cherry, G. J. Demmler & S. L. Kaplan. Philadelphia: Saunders
    • Robert, C.W. (2003). Bronchiolitis and infectious asthma. In Textbook of Pediatric InfectiousDiseases, 5th edn, pp. 273-282. Edited by R.D. Feigin, J. D. Cherry, G. J. Demmler & S. L. Kaplan. Philadelphia: Saunders.
    • (2003) In Textbook of Pediatric InfectiousDiseases , pp. 273-282
    • Robert, C.W.1
  • 25
    • 77952705988 scopus 로고    scopus 로고
    • Viral respiratory tract infections and asthma: The course ahead
    • & Infections and Asthma Committee, Environmental and Occupational Respiratory Diseases Interest Section, American Academy of Allergy, Asthma & Immunology
    • Rosenthal, L. A., Avila, P. C., Heymann, P. W., Martin, R. J., Miller, E. K., Papadopoulos, N. G., Peebles, R. S., Jr, Gern, J. E. & Infections and Asthma Committee, Environmental and Occupational Respiratory Diseases Interest Section, American Academy of Allergy, Asthma & Immunology (2010). Viral respiratory tract infections and asthma: the course ahead. J Allergy Clin Immunol 125, 1212-1217.
    • (2010) J Allergy Clin Immunol , vol.125 , pp. 1212-1217
    • Rosenthal, L.A.1    Avila, P.C.2    Heymann, P.W.3    Martin, R.J.4    Miller, E.K.5    Papadopoulos, N.G.6    Peebles Jr., R.S.7    Gern, J.E.8
  • 26
    • 81255123479 scopus 로고    scopus 로고
    • Fixation of oligosaccharides to a surface may increase the susceptibility to human parainfluenza virus 1, 2, or 3 hemagglutinin-neuraminidase
    • Tappert, M. M., Smith, D. F. & Air, G. M. (2011). Fixation of oligosaccharides to a surface may increase the susceptibility to human parainfluenza virus 1, 2, or 3 hemagglutinin-neuraminidase. J Virol 85, 12146-12159.
    • (2011) J Virol , vol.85 , pp. 12146-12159
    • Tappert, M.M.1    Smith, D.F.2    Air, G.M.3
  • 27
    • 0031741182 scopus 로고    scopus 로고
    • Estimating the Rate of Evolution of the Rate of Molecular Evolution
    • Thorne, J. L., Kishino, H. & Painter, I. S. (1998). Estimating the rate of evolution of the rate of molecular evolution.Mol Biol Evol 15, 1647-1657.
    • (1998) Mol Biol Evol , vol.15 , pp. 1647-1657
    • Thorne, J.L.1    Kishino, H.2    Painter, I.S.3
  • 28
    • 0028214103 scopus 로고
    • Estimating the pattern of nucleotide substitution
    • Yang, Z. (1994a). Estimating the pattern of nucleotide substitution. J Mol Evol 39, 105-111.
    • (1994) J Mol Evol , vol.39 , pp. 105-111
    • Yang, Z.1
  • 29
    • 0028064845 scopus 로고
    • Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: Approximate methods
    • Yang, Z. (1994b). Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods. J Mol Evol 39, 306-314.
    • (1994) J Mol Evol , vol.39 , pp. 306-314
    • Yang, Z.1
  • 31
    • 84861117901 scopus 로고    scopus 로고
    • Molecular epidemiology of the attachment glycoprotein (G) gene in respiratory syncytial virus in children with acute respiratory infection in Japan in 2009/2010
    • Yoshida, A., Kiyota, N., Kobayashi, M., Nishimura, K., Tsutsui, R., Tsukagoshi, H., Hirano, E., Yamamoto, N., Ryo, A. & other authors (2012). Molecular epidemiology of the attachment glycoprotein (G) gene in respiratory syncytial virus in children with acute respiratory infection in Japan in 2009/2010. J Med Microbiol 61, 820-829.
    • (2012) J Med Microbiol , vol.61 , pp. 820-829
    • Yoshida, A.1    Kiyota, N.2    Kobayashi, M.3    Nishimura, K.4    Tsutsui, R.5    Tsukagoshi, H.6    Hirano, E.7    Yamamoto, N.8    Ryo, A.9


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