Wheat genomics for grain quality improvement

Cereal Foods World

Volumn 59, Issue 1, 2014, Pages 22-24

  Henry, R J ^a  

^a UNIVERSITY OF QUEENSLAND   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84897780825     PISSN: 01466283     EISSN: None     Source Type: Journal    
DOI: 10.1094/CFW-59-1-0022     Document Type: Article

References (34)

1. Bradner, J. R., Southan, M. D., and Willows, R. D. Bioprocessing of grains. Patent WO 2007106941 A1, 2007.
2. Brenchley, R., Spannagl, M., Pfeifer, M., Barker, G. L. A., D'Amore, R., et al. Analysis of the bread wheat genome using wholegenome shotgun sequencing. Nature 491:705, 2012.
3. Bundock, P. C., Casu, R., and Henry, R. J. Enrichment of genomic DNA for polymorphism detection in a non-model highly polyploidy crop plant. Plant Biotechnol. J. 10:657, 2012.
4. Cronin, J. K., Bundock, P. C., Henry, R. J., and Nevo E. Adaptive climatic molecular evolution in wild barley at the Isa defense locus. Proc. Natl. Acad. Sci. U. S. A. 104:2773, 2007.
5. Edwards, D., Henry, R. J., and Edwards, K. J. Advances in DNA sequencing accelerating plant biotechnology. Plant Biotechnol. J. 10:621, 2012.
6. Edwards, M. A., and Henry, R. J. DNA sequencing methods contributing to new directions in cereal research. J. Cereal Sci. 54:395, 2011.
7. Edwards, M. A., Osborne, B. G., and Henry, R. J. Puroindoline genotype, starch granule size distribution and milling quality of wheat. J. Cereal Sci. 52:314, 2010.
8. Fitzgerald, T. L., Shapter, F. M., McDonald, S., Waters, D. L. E., Chivers, I. H., Drenth, A., Nevo, E., and Henry, R. J. Genome diversity in wild grasses under environmental stress. Proc. Natl. Acad. Sci. U. S. A. 108:21139, 2011.
9. Fitzgerald, T. L., Waters, D. L. E., Brooks, L. O., and Henry, R. J. Fragrance in rice (Oryza sativa) is associated with reduced yield under salt treatment. Environ. Exp. Bot. 68:292, 2010.
10. Furtado, A., Henry, R. J., and Pellegrineschi, A. Analysis of promoters in transgenic barley and wheat. Plant Biotechnol. J. 7:240, 2009.
11. Gillies, S., Furtado, A., and Henry, R. J. Gene expression in the developing aleurone and starchy endosperm of wheat. Plant Biotechnol. J. 10:668, 2012.
12. Henry, R. J. Practical Applications of Plant Molecular Biology. Chapman and Hall, London, England, 1997.
13. Henry, R. J. Plant Resources for Food, Fuel and Conservation. Earthscan, London, England, 2010.
14. Henry, R. J. Next generation sequencing for understanding and accelerating crop domestication. Brief. Funct. Genomics 11:51, 2012.
15. Henry, R. J. Molecular Markers in Plants. Wiley-Blackwell, Hoboken, NJ, 2013.
16. Henry, R. J. Sequencing crop wild relatives to support the conservation and utilization of plant genetic resources. Plant Genet. Resourc. Characteriz. Utiliz. DOI: http://dx.doi.org/10.1017/S1479262113000439, 2013.
17. Henry, R. J., Edwards, M., Waters, D. L. E., Krishnan, S. G., Bundock, P., Sexton, T. R., Masouleh, A. K., Nock, C. J., and Pattemore, J. Application of large scale sequencing to marker discovery in plants. J. Biosci. 37:829, 2012.
18. Henry, R. J., and Kettlewell, P. S., eds. Cereal Grain Quality. Chapman and Hall, London, England, 1996.
19. Henry, R. J., Marshall, D. F., Pattemore, J. A., Rice, N., and Waugh, R. Cereal variety identification using MALDI-TOF mass spectrometry SNP genotyping. J. Cereal Sci. 52:356, 2010.
20. Henry, R. J., Rice, N., Waters, D. L. E., Kasem, S., Ishikawa, R., Dillon, S. L., Crayn, D., Wing, R., and Vaughan, D. Australian Oryza: Utility and conservation. Rice 3:235, 2010.
21. Hill, H., Lee, L. S., and Henry, R. J. Variation in sorghum starch synthesis genes associated with differences in starch phenotype. Food Chem. 131:175, 2012.
22. Kasem, S., Waters, D. L. E., and Henry, R. J. Analysis of genetic diversity in starch genes in the wild relatives of rice. Trop. Plant Biol. 5:286, 2012.
23. Kharabian-Masouleh, A., Waters, D. L. E., Reinke, R. F., and Henry, R. J. Discovery of polymorphisms in starch-related genes in rice germplasm by amplification of pooled DNA and deeply parallel sequencing. Plant Biotechnol. J. 9:1074, 2011.
24. Kharabian-Masouleh, A., Waters, D. L. E., Reinke, R. F., Ward, R., and Henry, R. J. SNP in starch biosynthesis genes associated with nutritional and functional properties of rice. Sci. Rep. 2:557, 2012.
25. Krishnan, S. G., Waters, D. L. E., Katiyar, S. K., Sadananda, A. R., Satyadev, V., and Henry, R. J. Genome-wide DNA polymorphisms in elite indica rice inbreds discovered by whole-genome sequencing. Plant Biotechnol. J. 10:623, 2012.
26. Lakew, B., Eglinton, J., Henry, R. J., Baum, M., Grando, S., and Ceccarelli, S. The potential contribution of wild barley (Hordeum vulgare ssp. spontaneum) germplasm to drought tolerance of cultivated barley (H. vulgare ssp. vulgare). Field Crops Res. 120:161, 2010.
27. Lakew, B., Henry, R. J., Eglinton, J., Baum, M., Ceccarelli, S., and Grando, S. SSR analysis of introgression of drought tolerance from the genome of Hordeum spontaneum into cultivated barley (Hordeum vulgare ssp vulgare). Euphytica 191:231, 2012.
28. Ling, H.-Q., Zhao, S., Liu, D., Wang, J., Sun, H., et al. Draft genome of the wheat A-genome progenitor Triticum urartu. Nature 496:87, 2013.
29. Malory, S., Shapter, F. M., Elphinstone, M. S., Chivers, I. H., and Henry, R. J. Characterizing homologues of crop domestication genes in poorly described wild relatives by high-throughput sequencing of whole genomes. Plant Biotechnol. J. 9:1131, 2011.
30. Nock, C., Waters, D. L. E., Edwards, M. A., Bowen, S., Rice, N., Cordeiro, G. M., and Henry, R. J. Chloroplast genome sequence from total DNA for plant identification. Plant Biotechnol. J. 9:328, 2011.
31. Ray, D. K., Mueller, N. D., West, P. C., and Foley, J. A. Yield trends are insufficient to double global crop production by 2050. PLoS ONE 8(6):e66428, 2013.
32. Shapter, F. M., Cross, M., Ablett, G., Malory, S., Chivers, I. H., King, G. J., and Henry, R. J. High-throughput sequencing and mutagenesis to accelerate the domestication of Microlaena stipoides as a new food crop. PloS ONE. In press.
33. Shapter, F. M., Fitzgerald, T. L., Waters, D. L. E., McDonald, S., Chivers, I. H., and Henry, R. J. Analysis of adaptive ribosomal gene diversity in wild plant populations from contrasting climatic environments. Plant Signal. Behav. 7:1, 2012.
34. Waters, D. L. E., Nock, C. J., Ishikawa, R., Rice, N., and Henry, R. J. Chloroplast genome sequence confirms distinctness of Australian and Asian wild rice. Ecol. Evol. 2:211, 2012.