Uniform nomenclature for the mitochondrial contact site and cristae organizing system

Journal of Cell Biology

Volumn 204, Issue 7, 2014, Pages 1083-1086

  Pfanner, Nikolaus ^a,b   van der Laan, Martin ^a,b   Amati, Paolo ^c   Capaldi, Roderick A ^d   Caudy, Amy A ^e   Chacinska, Agnieszka ^f   Darshi, Manjula ^g   Deckers, Markus ⁱ   Hoppins, Suzanne ^j   Icho, Tateo ^k   Jakobs, Stefan ^l,m   Ji, Jianguo ⁿ   Kozjak Pavlovic, Vera ^o   Meisinger, Chris ^a,b   Odgren, Paul R ^p   Park, Sang Ki ^q   Rehling, Peter ^i,m   Reichert, Andreas S ^r   Sheikh, M Saeed ^s   Taylor, Susan S ^g,h   Tsuchida, Nobuo ^t   van der Bliek, Alexander M ^u   van der Klei, Ida J ^v   Weissman, Jonathan S ^w,x   Westermann, Bedikt ^y   Zha, Jiping ^z   Neupert, Walter ^aa   Nunnari, Jodi ^ab   more..

^a Zentrum fur Biochemie und Molekulare Zellforschung   (Germany)

^b UNIVERSITY OF FREIBURG   (Germany)

^c SAPIENZA UNIVERSITY OF ROME   (Italy)

^d Metabolic Profiling Inc   (United States)

^e UNIVERSITY OF TORONTO   (Canada)

^f INTERNATIONAL INSTITUTE OF MOLECULAR AND CELL BIOLOGY   (Poland)

^g UNIVERSITY OF CALIFORNIA   (United States)

^h University of California San Diego   (United States)

ⁱ UNIVERSITY OF GÖTTINGEN   (Germany)

^j UNIVERSITY OF WASHINGTON SCHOOL OF MEDICINE   (United States)

^k Somechi Orchid Laboratory   (Japan)

^l UNIVERSITY MEDICAL CENTER GÖTTINGEN   (Germany)

^m MAX PLANCK INSTITUTE FOR BIOPHYSICAL CHEMISTRY   (Germany)

ⁿ PEKING UNIVERSITY   (China)

^o UNIVERSITY OF WÜRZBURG   (Germany)

^p UNIVERSITY OF MASSACHUSETTS MEDICAL SCHOOL   (United States)

^q Pohang University of Science and Technology (POSTECH)   (South Korea)

^r GOETHE UNIVERSITY   (Germany)

^s State University of New York Upstate Medical University: College of Medicine   (United States)

^t TOKYO MEDICAL AND DENTAL UNIVERSITY   (Japan)

^u UNIVERSITY OF CALIFORNIA   (United States)

^v UNIVERSITY OF GRONINGEN   (Netherlands)

^w UNIVERSITY OF CALIFORNIA   (United States)

^x UNIVERSITY OF CALIFORNIA   (United States)

^y UNIVERSITY OF BAYREUTH   (Germany)

^z Crown Bioscience Inc   (China)

^aa MAX PLANCK INSTITUTE OF BIOCHEMISTRY   (Germany)

^ab UNIVERSITY OF CALIFORNIA   (United States)

more..

Author keywords

[No Author keywords available]

Indexed keywords

CELL MEMBRANE; CELL STRUCTURE; CRISTAE ORGANIZING SYSTEM; MEMBRANE STRUCTURE; MITOCHONDRIAL CONTACT SITE; MITOCHONDRION; NOMENCLATURE; NOTE; PRIORITY JOURNAL;

ANIMALS; HUMANS; MITOCHONDRIAL MEMBRANES; MITOCHONDRIAL PROTEINS; MODELS, MOLECULAR; MULTIPROTEIN COMPLEXES; PROTEIN SUBUNITS; TERMINOLOGY AS TOPIC;

EID: 84897518469     PISSN: 00219525     EISSN: 15408140     Source Type: Journal    
DOI: 10.1083/jcb.201401006     Document Type: Note

References (45)

1. Alkhaja, A.K., D.C. Jans, M. Nikolov, M. Vukotic, O. Lytovchenko, F. Ludewig, W. Schliebs, D. Riedel, H. Urlaub, S. Jakobs, and M. Deckers. 2012. MINOS1 is a conserved component of mitofilin complexes and required for mitochondrial function and cristae organization. Mol. Biol. Cell. 23:247-257. http://dx.doi.org/10.1091/mbc.E11-09-0774
2. An, J., J. Shi, Q. He, K. Lui, Y. Liu, Y. Huang, and M.S. Sheikh. 2012. CHCM1/ CHCHD6, novel mitochondrial protein linked to regulation of mitofilin and mitochondrial cristae morphology. J. Biol. Chem. 287:7411-7426. http://dx.doi.org/10.1074/jbc.M111.277103
3. Bohnert, M., L.S. Wenz, R.M. Zerbes, S.E. Horvath, D.A. Stroud, K. von der Malsburg, J.M. Müller, S. Oeljeklaus, I. Perschil, B. Warscheid, et al. 2012. Role of mitochondrial inner membrane organizing system in protein biogenesis of the mitochondrial outer membrane. Mol. Biol. Cell. 23:3948-3956. http://dx.doi.org/10.1091/mbc.E12-04-0295
4. Chacinska, A., C.M. Koehler, D. Milenkovic, T. Lithgow, and N. Pfanner. 2009. Importing mitochondrial proteins: machineries and mechanisms. Cell. 138:628-644. http://dx.doi.org/10.1016/j.cell.2009.08.005
5. Connerth, M., T. Tatsuta, M. Haag, T. Klecker, B. Westermann, and T. Langer. 2012. Intramitochondrial transport of phosphatidic acid in yeast by a lipid transfer protein. Science. 338:815-818. http://dx.doi.org/10.1126/ science.1225625
6. Darshi, M., V.L. Mendiola, M.R. Mackey, A.N. Murphy, A. Koller, G.A. Perkins, M.H. Ellisman, and S.S. Taylor. 2011. ChChd3, an inner mitochondrial membrane protein, is essential for maintaining crista integrity and mitochondrial function. J. Biol. Chem. 286:2918-2932. http://dx.doi .org/10.1074/jbc.M110.171975
7. Davies, K.M., M. Strauss, B. Daum, J.H. Kief, H.D. Osiewacz, A. Rycovska, V. Zickermann, and W. Kühlbrandt. 2011. Macromolecular organization of ATP synthase and complex I in whole mitochondria. Proc. Natl. Acad. Sci. USA. 108:14121-14126. http://dx.doi.org/10.1073/pnas.1103621108
8. Frey, T.G., and C.A. Mannella. 2000. The internal structure of mitochondria. Trends Biochem. Sci. 25:319-324. http://dx.doi.org/10.1016/S0968-0004(00)01609-1
9. Gabriel, K., D. Milenkovic, A. Chacinska, J. Müller, B. Guiard, N. Pfanner, and C. Meisinger. 2007. Novel mitochondrial intermembrane space proteins as substrates of the MIA import pathway. J. Mol. Biol. 365:612-620. http://dx.doi.org/10.1016/j.jmb.2006.10.038
10. Gieffers, C., F. Korioth, P. Heimann, C. Ungermann, and J. Frey. 1997. Mitofilin is a transmembrane protein of the inner mitochondrial membrane expressed as two isoforms. Exp. Cell Res. 232:395-399. http://dx.doi.org/10.1006/excr.1997.3539
11. Hackenbrock, C.R. 1968. Chemical and physical fixation of isolated mitochondria in low-energy and high-energy states. Proc. Natl. Acad. Sci. USA. 61:598-605. http://dx.doi.org/10.1073/pnas.61.2.598
12. Harner, M., C. Körner, D. Walther, D. Mokranjac, J. Kaesmacher, U. Welsch, J. Griffith, M. Mann, F. Reggiori, and W. Neupert. 2011. The mitochondrial contact site complex, a determinant of mitochondrial architecture. EMBO J. 30:4356-4370. http://dx.doi.org/10.1038/emboj.2011.379
13. Head, B.P., M. Zulaika, S. Ryazantsev, and A.M. van der Bliek. 2011. A novel mitochondrial outer membrane protein, MOMA-1, that affects cristae morphology in Caenorhabditis elegans. Mol. Biol. Cell. 22:831-841. http://dx.doi.org/10.1091/mbc.E10-07-0600
14. Hess, D.C., C.L. Myers, C. Huttenhower, M.A. Hibbs, A.P. Hayes, J. Paw, J.J. Clore, R.M. Mendoza, B.S. Luis, C. Nislow, et al. 2009. Computationally driven, quantitative experiments discover genes required for mitochondrial biogenesis. PLoS Genet. 5:e1000407. http://dx.doi.org/10.1371/journal.pgen.1000407
15. Hoppins, S., L. Lackner, and J. Nunnari. 2007. The machines that divide and fuse mitochondria. Annu. Rev. Biochem. 76:751-780. http://dx.doi.org/10 .1146/annurev.biochem.76.071905.090048
16. Hoppins, S., S.R. Collins, A. Cassidy-Stone, E. Hummel, R.M. Devay, L.L. Lackner, B. Westermann, M. Schuldiner, J.S. Weissman, and J. Nunnari. 2011. A mitochondrial-focused genetic interaction map reveals a scaffoldlike complex required for inner membrane organization in mitochondria. J. Cell Biol. 195:323-340. http://dx.doi.org/10.1083/jcb.201107053
17. Icho, T., T. Ikeda, Y. Matsumoto, F. Hanaoka, K. Kaji, and N. Tsuchida. 1994. A novel human gene that is preferentially transcribed in heart muscle. Gene. 144:301-306. http://dx.doi.org/10.1016/0378-1119(94)90394-8
18. Itoh, K., Y. Tamura, M. Iijima, and H. Sesaki. 2013. Effects of Fcj1-Mos1 and mitochondrial division on aggregation of mitochondrial DNA nucleoids and organelle morphology. Mol. Biol. Cell. 24:1842-1851. http://dx.doi.org/10.1091/mbc.E13-03-0125
19. Jans, D.C., C.A. Wurm, D. Riedel, D. Wenzel, F. Stagge, M. Deckers, P. Rehling, and S. Jakobs. 2013. STED super-resolution microscopy reveals an array of MINOS clusters along human mitochondria. Proc. Natl. Acad. Sci. USA. 110:8936-8941. http://dx.doi.org/10.1073/pnas.1301820110
20. John, G.B., Y. Shang, L. Li, C. Renken, C.A. Mannella, J.M. Selker, L. Rangell, M.J. Bennett, and J. Zha. 2005. The mitochondrial inner membrane protein mitofilin controls cristae morphology. Mol. Biol. Cell. 16:1543-1554. http://dx.doi.org/10.1091/mbc.E04-08-0697
21. Körner, C., M. Barrera, J. Dukanovic, K. Eydt, M. Harner, R. Rabl, F. Vogel, D. Rapaport, W. Neupert, and A.S. Reichert. 2012. The C-terminal domain of Fcj1 is required for formation of crista junctions and interacts with the TOB/SAM complex in mitochondria. Mol. Biol. Cell. 23:2143-2155. http://dx.doi.org/10.1091/mbc.E11-10-0831
22. Mun, J.Y., T.H. Lee, J.H. Kim, B.H. Yoo, Y.Y. Bahk, H.S. Koo, and S.S. Han. 2010. Caenorhabditis elegans mitofilin homologs control the morphology of mitochondrial cristae and influence reproduction and physiology. J. Cell. Physiol. 224:748-756. http://dx.doi.org/10.1002/jcp.22177
23. Neupert, W., and J.M. Herrmann. 2007. Translocation of proteins into mitochondria. Annu. Rev. Biochem. 76:723-749. http://dx.doi.org/10.1146/annurev .biochem.76.052705.163409
24. Odgren, P.R., G. Toukatly, P.L. Bangs, R. Gilmore, and E.G. Fey. 1996. Molecular characterization of mitofilin (HMP), a mitochondria-associated protein with predicted coiled coil and intermembrane space targeting domains. J. Cell Sci. 109:2253-2264.
25. Ott, C., K. Ross, S. Straub, B. Thiede, M. Götz, C. Goosmann, M. Krischke, M.J. Mueller, G. Krohne, T. Rudel, and V. Kozjak-Pavlovic. 2012. Sam50 functions in mitochondrial intermembrane space bridging and biogenesis of respiratory complexes. Mol. Cell. Biol. 32:1173-1188. http://dx.doi.org/10.1128/MCB.06388-11
26. Palade, G.E. 1952. The fine structure of mitochondria. Anat. Rec. 114:427-451. http://dx.doi.org/10.1002/ar.1091140304
27. Park, Y.U., J. Jeong, H. Lee, J.Y. Mun, J.H. Kim, J.S. Lee, M.D. Nguyen, S.S. Han, P.G. Suh, and S.K. Park. 2010. Disrupted-in-schizophrenia 1 (DISC1) plays essential roles in mitochondria in collaboration with Mitofilin. Proc. Natl. Acad. Sci. USA. 107:17785-17790. http://dx.doi.org/10.1073/pnas .1004361107
28. Pellegrini, L., and L. Scorrano. 2007. A cut short to death: Parl and Opa1 in the regulation of mitochondrial morphology and apoptosis. Cell Death Differ. 14:1275-1284. http://dx.doi.org/10.1038/sj.cdd.4402145
29. Perkins, G., C. Renken, M.E. Martone, S.J. Young, M. Ellisman, and T. Frey. 1997. Electron tomography of neuronal mitochondria: three-dimensional structure and organization of cristae and membrane contacts. J. Struct. Biol. 119:260-272. http://dx.doi.org/10.1006/jsbi.1997.3885
30. Rabl, R., V. Soubannier, R. Scholz, F. Vogel, N. Mendl, A. Vasiljev-Neumeyer, C. Körner, R. Jagasia, T. Keil, W. Baumeister, et al. 2009. Formation of cristae and crista junctions in mitochondria depends on antagonism between Fcj1 and Su e/g. J. Cell Biol. 185:1047-1063. http://dx.doi.org/10.1083/jcb.200811099
31. Rossi, M.N., M. Carbone, C. Mostocotto, C. Mancone, M. Tripodi, R. Maione, and P. Amati. 2009. Mitochondrial localization of PARP-1 requires interaction with mitofilin and is involved in the maintenance of mitochondrial DNA integrity. J. Biol. Chem. 284:31616-31624. http://dx.doi.org/10 .1074/jbc.M109.025882
32. Schatz, G. 1996. The protein import system of mitochondria. J. Biol. Chem. 271:31763-31766. http://dx.doi.org/10.1074/jbc.271.50.31763
33. Sesaki, H., and R.E. Jensen. 2004. Ugo1p links the Fzo1p and Mgm1p GTPases for mitochondrial fusion. J. Biol. Chem. 279:28298-28303. http://dx.doi.org/10.1074/jbc.M401363200
34. van der Laan, M., M. Bohnert, N. Wiedemann, and N. Pfanner. 2012. Role of MINOS in mitochondrial membrane architecture and biogenesis. Trends Cell Biol. 22:185-192. http://dx.doi.org/10.1016/j.tcb.2012.01.004
35. Varabyova, A., U. Topf, P. Kwiatkowska, L. Wrobel, M. Kaus-Drobek, and A. Chacinska. 2013. Mia40 and MINOS act in parallel with Ccs1 in the biogenesis of mitochondrial Sod1. FEBS J. 280:4943-4959. http://dx.doi.org/10.1111/febs.12409
36. Vogel, F., C. Bornhövd, W. Neupert, and A.S. Reichert. 2006. Dynamic subcompartmentalization of the mitochondrial inner membrane. J. Cell Biol. 175:237-247. http://dx.doi.org/10.1083/jcb.200605138
37. Vögtle, F.N., J.M. Burkhart, S. Rao, C. Gerbeth, J. Hinrichs, J.C. Martinou, A. Chacinska, A. Sickmann, R.P. Zahedi, and C. Meisinger. 2012. Intermembrane space proteome of yeast mitochondria. Mol. Cell. Proteomics. 11:1840-1852. http://dx.doi.org/10.1074/mcp.M112.021105
38. von der Malsburg, K., J.M. Müller, M. Bohnert, S. Oeljeklaus, P. Kwiatkowska, T. Becker, A. Loniewska-Lwowska, S. Wiese, S. Rao, D. Milenkovic, et al. 2011. Dual role of mitofilin in mitochondrial membrane organization and protein biogenesis. Dev. Cell. 21:694-707. http://dx.doi.org/10.1016/j.devcel.2011.08.026
39. Wang, Q., Y. Liu, X. Zou, Q. Wang, M. An, X. Guan, J. He, Y. Tong, and J. Ji. 2008. The hippocampal proteomic analysis of senescence-accelerated mouse: implications of Uchl3 and mitofilin in cognitive disorder and mitochondria dysfunction in SAMP8. Neurochem. Res. 33:1776-1782. http://dx.doi.org/10.1007/s11064-008-9628-6
40. Weber, T.A., S. Koob, H. Heide, I. Wittig, B. Head, A. van der Bliek, U. Brandt, M. Mittelbronn, and A.S. Reichert. 2013. APOOL is a cardiolipin-binding constituent of the Mitofilin/MINOS protein complex determining cristae morphology in mammalian mitochondria. PLoS ONE. 8:e63683. http://dx.doi.org/10.1371/journal.pone.0063683
41. Werner, S., and W. Neupert. 1972. Functional and biogenetical heterogeneity of the inner membrane of rat-liver mitochondria. Eur. J. Biochem. 25:379- 396. http://dx.doi.org/10.1111/j.1432-1033.1972.tb01707.x
42. Wurm, C.A., and S. Jakobs. 2006. Differential protein distributions define two sub-compartments of the mitochondrial inner membrane in yeast. FEBS Lett. 580:5628-5634. http://dx.doi.org/10.1016/j.febslet.2006.09.012
43. Xie, J., M.F. Marusich, P. Souda, J. Whitelegge, and R.A. Capaldi. 2007. The mitochondrial inner membrane protein mitofilin exists as a complex with SAM50, metaxins 1 and 2, coiled-coil-helix coiled-coil-helix domaincontaining protein 3 and 6 and DnaJC11. FEBS Lett. 581:3545-3549. http://dx.doi.org/10.1016/j.febslet.2007.06.052
44. Zerbes, R.M., M. Bohnert, D.A. Stroud, K. von der Malsburg, A. Kram, S. Oeljeklaus, B. Warscheid, T. Becker, N. Wiedemann, M. Veenhuis, et al. 2012. Role of MINOS in mitochondrial membrane architecture: cristae morphology and outer membrane interactions differentially depend on mitofilin domains. J. Mol. Biol. 422:183-191. http://dx.doi.org/10.1016/j.jmb.2012.05.004
45. Zick, M., R. Rabl, and A.S. Reichert. 2009. Cristae formation-linking ultrastructure and function of mitochondria. Biochim. Biophys. Acta. 1793:5-19. http://dx.doi.org/10.1016/j.bbamcr.2008.06.013