A propagating ATPase gradient drives transport of surface-confined cellular cargo

Proceedings of the National Academy of Sciences of the United States of America

Volumn 111, Issue 13, 2014, Pages 4880-4885

  Vecchiarelli, Anthony G ^a   Neuman, Keir C ^b   Mizuuchi, Kiyoshi ^a  

^a NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES   (United States)

^b NATIONAL HEART LUNG AND BLOOD INSTITUTE   (United States)

Author keywords

Bacterial chromosome segregation; ParA ATPase; Protein gradients; Spatial organization

Indexed keywords

ADENOSINE TRIPHOSPHATASE; DNA; PROTEIN PARA; PROTEIN PARB; UNCLASSIFIED DRUG;

ARTICLE; BACTERIAL CHROMOSOME; CENTROMERE; MAGNETIC FIELD; MOTION; MOTOR SYSTEM; NONHUMAN; PLASMID; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN LOCALIZATION; SURFACE PROPERTY;

BACTERIAL CHROMOSOME SEGREGATION; PARA ATPASE; PROTEIN GRADIENTS; SPATIAL ORGANIZATION;

ADENOSINE TRIPHOSPHATASES; ANIMALS; BACTERIAL PROTEINS; BIOLOGICAL TRANSPORT; CELL MEMBRANE; DIFFUSION; DNA, BACTERIAL; MODELS, BIOLOGICAL; PLASMIDS;

EID: 84897486085     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1401025111     Document Type: Article

References (27)

1. Lutkenhaus J (2012) The ParA/MinD family puts things in their place. Trends Microbiol 20(9):411-418.
2. Vecchiarelli AG, Mizuuchi K, Funnell BE (2012) Surfing biological surfaces: Exploiting the nucleoid for partition and transport in bacteria. Mol Microbiol 86(3):513-523.
3. Ah-Seng Y, Lopez F, Pasta F, Lane D, Bouet JY (2009) Dual role of DNA in regulating ATP hydrolysis by the SopA partition protein. J Biol Chem 284(44):30067-30075.
4. Sanchez A, Rech J, Gasc C, Bouet JY (2013) Insight into centromere-binding properties of ParB proteins: A secondary binding motif is essential for bacterial genome maintenance. Nucleic Acids Res 41(5):3094-3103.
5. Castaing JP, Bouet JY, Lane D (2008) F plasmid partition depends on interaction of SopA with non-specific DNA. Mol Microbiol 70(4):1000-1011.
6. Vecchiarelli AG, Hwang LC, Mizuuchi K (2013) Cell-free study of F plasmid partition provides evidence for cargo transport by a diffusion-ratchet mechanism. Proc Natl Acad Sci USA 110(15):E1390-E1397.
7. Hatano T, Yamaichi Y, Niki H (2007) Oscillating focus of SopA associated with filamentous structure guides partitioning of F plasmid. Mol Microbiol 64(5):1198-1213.
8. Ringgaard S, van Zon J, Howard M, Gerdes K (2009) Movement and equipositioning of plasmids by ParA filament disassembly. Proc Natl Acad Sci USA 106(46):19369-19374.
9. Ptacin JL, et al. (2010) A spindle-like apparatus guides bacterial chromosome segregation. Nat Cell Biol 12(8):791-798.
10. Vecchiarelli AG, et al. (2010) ATP control of dynamic P1 ParA-DNA interactions: A key role for the nucleoid in plasmid partition. Mol Microbiol 78(1):78-91.
11. Hwang LC, et al. (2013) ParA-mediated plasmid partition driven by protein pattern self-organization. EMBO J 32(9):1238-1249.
12. Sugawara T, Kaneko K (2011) Chemophoresis as a driving force for intracellular organization: Theory and application to plasmid partitioning. Biophys Soc Japan 7: 77-88.
13. Mika JT, Poolman B (2011) Macromolecule diffusion and confinement in prokaryotic cells. Curr Opin Biotechnol 22(1):117-126.
14. Turing AM (1952) The chemical basis of morphogenesis. Philos Trans R Soc Lond Ser B 237(641):37-72.
15. Hunding A, Ebersbach G, Gerdes K (2003) A mechanism for ParB-dependent waves of ParA, a protein related to DNA segregation during cell division in prokaryotes. J Mol Biol 329(1):35-43.
16. Adachi S, Hori K, Hiraga S (2006) Subcellular positioning of F plasmid mediated by dynamic localization of SopA and SopB. J Mol Biol 356(4):850-863.
17. Savage DF, Afonso B, Chen AH, Silver PA (2010) Spatially ordered dynamics of the bacterial carbon fixation machinery. Science 327(5970):1258-1261.
18. Schofield WB, Lim HC, Jacobs-Wagner C (2010) Cell cycle coordination and regulation of bacterial chromosome segregation dynamics by polarly localized proteins. EMBO J 29(18):3068-3081.
19. Bouet JY, Rech J, Egloff S, Biek DP, Lane D (2005) Probing plasmid partition with centromere-based incompatibility. Mol Microbiol 55(2):511-525.
20. Pinot M, et al. (2012) Confinement induces actin flow in a meiotic cytoplasm. Proc Natl Acad Sci USA 109(29):11705-11710.
21. Garner EC, Campbell CS, Weibel DB, Mullins RD (2007) Reconstitution of DNA segregation driven by assembly of a prokaryotic actin homolog. Science 315(5816): 1270-1274.
22. Rodionov O, Yarmolinsky M (2004) Plasmid partitioning and the spreading of P1 partition protein ParB. Mol Microbiol 52(4):1215-1223.
23. Kondo S, Miura T (2010) Reaction-diffusion model as a framework for understanding biological pattern formation. Science 329(5999):1616-1620.
24. Sheth R, et al. (2012) Hox genes regulate digit patterning by controlling the wavelength of a Turing-type mechanism. Science 338(6113):1476-1480.
25. Alymova IV, Taylor G, Portner A (2005) Neuraminidase inhibitors as antiviral agents. Curr Drug Targets Infect Disord 5(4):401-409.
26. Sbalzarini IF, Koumoutsakos P (2005) Feature point tracking and trajectory analysis for video imaging in cell biology. J Struct Biol 151(2):182-195.
27. Niu L, Yu J (2008) Investigating intracellular dynamics of FtsZ cytoskeleton with photoactivation single-molecule tracking. Biophys J 95(4):2009-2016.