메뉴 건너뛰기




Volumn 9, Issue 3, 2014, Pages

A linguistically informed autosomal STR survey of human populations residing in the greater himalayan region

(22)  Kraaijenbrink, Thirsa a   Van Der Gaag, Kristiaan J a   Zuniga, Sofia B a   Xue, Yali b   Carvalho Silva, Denise R b,j   Tyler Smith, Chris b   Jobling, Mark A c   Parkin, Emma J c   Su, Bing d   Shi, Hong d   Xiao, Chun Jie e   Tang, Wen Ru e   Kashyap, V K f   Trivedi, R f   Sitalaximi, T f   Banerjee, Jheelam f   Tshering, Karma g   Tuladhar, Nirmal M h   Opgenort, Jean Robert M L g   Van Driem, George L g   more..


Author keywords

[No Author keywords available]

Indexed keywords

DNA; MICROSATELLITE DNA;

EID: 84897485591     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0091534     Document Type: Article
Times cited : (20)

References (68)
  • 2
    • 52949134076 scopus 로고    scopus 로고
    • Genomic inferences in peopling of south Asia
    • Majumder PP (2008) Genomic inferences in peopling of south Asia. Curr Opin Genet Dev 18: 280-284.
    • (2008) Curr Opin Genet Dev , vol.18 , pp. 280-284
    • Majumder, P.P.1
  • 3
    • 66349111704 scopus 로고    scopus 로고
    • Genetic insights into the origins of Tibeto-Burman populations in the Himalayas
    • Gayden T, Mitabal S, Cadenas AM, Lacau H, Simms TM, et al. (2009) Genetic insights into the origins of Tibeto-Burman populations in the Himalayas. J Hum Genet 54: 216-223.
    • (2009) J Hum Genet , vol.54 , pp. 216-223
    • Gayden, T.1    Mitabal, S.2    Cadenas, A.M.3    Lacau, H.4    Simms, T.M.5
  • 4
    • 80052331328 scopus 로고    scopus 로고
    • Human Migration through Bottlenecks from Southeast Asia into East Asia during Last Glacial Maximum Revealed by y Chromosomes
    • Cai X, Qin Z, Wen B, Xu S, Wang Y, et al. (2011) Human Migration through Bottlenecks from Southeast Asia into East Asia during Last Glacial Maximum Revealed by Y Chromosomes. PLoS ONE 6: e24282.
    • (2011) PLoS ONE , vol.6
    • Cai, X.1    Qin, Z.2    Wen, B.3    Xu, S.4    Wang, Y.5
  • 5
    • 84155186331 scopus 로고    scopus 로고
    • Y-chromosome O3 Haplogroup Diversity in Sino-Tibetan Populations Reveals Two Migration Routes into the Eastern Himalayas
    • Kang L, Lu Y, Wang C, Hu K, Chen F, et al. (2012) Y-chromosome O3 Haplogroup Diversity in Sino-Tibetan Populations Reveals Two Migration Routes into the Eastern Himalayas. Ann Hum Genet 76: 92-99.
    • (2012) Ann Hum Genet , vol.76 , pp. 92-99
    • Kang, L.1    Lu, Y.2    Wang, C.3    Hu, K.4    Chen, F.5
  • 7
    • 3242811372 scopus 로고    scopus 로고
    • The Northeast Indian passageway: A barrier or corridor for human migrations?
    • DOI 10.1093/molbev/msh151
    • Cordaux R, Weiss G, Saha N, Stoneking M (2004) The northeast Indian passageway: a barrier or corridor for human migrations? Mol Biol Evol 21: 1525-1533. (Pubitemid 38976555)
    • (2004) Molecular Biology and Evolution , vol.21 , Issue.8 , pp. 1525-1533
    • Cordaux, R.1    Weiss, G.2    Saha, N.3    Stoneking, M.4
  • 8
    • 25444434143 scopus 로고    scopus 로고
    • Most of the extant mtDNA boundaries in South and Southwest Asia were likely shaped during the initial settlement of Eurasia by anatomically modern humans
    • Metspalu M, Kivisild T, Metspalu E, Parik J, Hudjashov G, et al. (2004) Most of the extant mtDNA boundaries in South and Southwest Asia were likely shaped during the initial settlement of Eurasia by anatomically modern humans. BMC Genet 5: 26.
    • (2004) BMC Genet , vol.5 , pp. 26
    • Metspalu, M.1    Kivisild, T.2    Metspalu, E.3    Parik, J.4    Hudjashov, G.5
  • 9
    • 33646171102 scopus 로고    scopus 로고
    • Male Demography in East Asia: A North-South Contrast in Human Population Expansion Times
    • Xue Y, Zerjal T, Bao W, Zhu S, Shu Q, et al. (2006) Male Demography in East Asia: A North-South Contrast in Human Population Expansion Times. Genetics 172: 2431-2439.
    • (2006) Genetics , vol.172 , pp. 2431-2439
    • Xue, Y.1    Zerjal, T.2    Bao, W.3    Zhu, S.4    Shu, Q.5
  • 12
    • 33744970289 scopus 로고    scopus 로고
    • Genetic encapsulation among Near Eastern populations
    • DOI 10.1007/s10038-006-0387-4
    • Shepard EM, Herrera RJ (2006) Genetic encapsulation among Near Eastern Populations. J Hum Genet 51: 467-476. (Pubitemid 43863784)
    • (2006) Journal of Human Genetics , vol.51 , Issue.5 , pp. 467-476
    • Shepard, E.M.1    Herrera, R.J.2
  • 13
    • 78651397690 scopus 로고    scopus 로고
    • In the heartland of Eurasia: The multilocus genetic landscape of Central Asian populations
    • Mart́inez-Cruz B, Vitalis R, Ségurel L, Austerlitz F, Georges M, et al. (2011) In the heartland of Eurasia: the multilocus genetic landscape of Central Asian populations. Eur J Hum Genet 19: 216-223
    • (2011) Eur J Hum Genet , vol.19 , pp. 216-223
    • Mart́inez-Cruz, B.1    Vitalis, R.2    Ségurel, L.3    Austerlitz, F.4    Georges, M.5
  • 18
    • 15944414175 scopus 로고    scopus 로고
    • The human genome diversity project: Past, present and future
    • DOI 10.1038/nrg1596
    • Cavalli-Sforza LL (2005) The Human Genome Diversity Project: past, present and future. Nat Rev Genet 6: 333-340. (Pubitemid 40469052)
    • (2005) Nature Reviews Genetics , vol.6 , Issue.4 , pp. 333-340
    • Cavalli-Sforza, L.L.1
  • 19
    • 0038309912 scopus 로고    scopus 로고
    • Genetic diversity in four tribal groups of western India: A survey of polymorphism in 15 STR loci and their application in human identification
    • DOI 10.1016/S0379-0738(03)00166-X
    • Gaikwad S, Kashyap VK (2003) Genetic diversity in four tribal groups of western India: a survey of polymorphism in 15 STR loci and their application in human identification. Forensic Sci Int 134: 225-231. (Pubitemid 36814069)
    • (2003) Forensic Science International , vol.134 , Issue.2-3 , pp. 225-231
    • Gaikwad, S.1    Kashyap, V.K.2
  • 20
    • 0038621785 scopus 로고    scopus 로고
    • Evaluation of 15 biparental STR loci in human identification and genetic study of the Kannada-speaking groups of India
    • DOI 10.1097/00000433-200306000-00018
    • Rajkumar R, Kashyap VK (2003) Evaluation of 15 Biparental STR Loci in Human Identification and Genetic Study of the Kannada-Speaking Groups of India. Am J Forensic Med Pathol 24: 187-192. (Pubitemid 36666068)
    • (2003) American Journal of Forensic Medicine and Pathology , vol.24 , Issue.2 , pp. 187-192
    • Rajkumar, R.1    Kashyap, V.K.2
  • 21
    • 3242776869 scopus 로고    scopus 로고
    • Deciphering diversity in populations of various linguistic and ethnic affiliations of different geographical regions of India: Analysis based on 15 microsatellite markers
    • Kashyap VK, Ashma R, Gaikwad S, Sarkar BN, Trivedi R (2004). Deciphering diversity in populations of various linguistic and ethnic affiliations of different geographical regions in India: analysis based on 15 microsatellite markers. J Genet 83: 49-63. (Pubitemid 38969492)
    • (2004) Journal of Genetics , vol.83 , Issue.1 , pp. 49-63
    • Kashyap, V.K.1    Ashma, R.2    Gaikwad, S.3    Sarkar, B.N.4    Trivedi, R.5
  • 22
    • 0346390894 scopus 로고    scopus 로고
    • Allelic Variation at 15 Microsatellite Loci in One Important Australoid and Two Indocaucasoid Groups of Chhattisgarh - India
    • Neeta S, Kashyap VK (2004) Allelic Variation at 15 Microsatellite Loci in One Important Australoid and Two Indocaucasoid Groups of Chhattisgarh-India. J Forensic Sci 49: 184-188. (Pubitemid 38063813)
    • (2004) Journal of Forensic Sciences , vol.49 , Issue.1 , pp. 184-188
    • Neeta, S.1    Kashyap, V.K.2
  • 23
    • 21444434396 scopus 로고    scopus 로고
    • Genotypic Polymorphisms at Seventeen Autosomal Short Tandem Repeat Loci in Four Tribal Populations of Andhra Pradesh, India
    • Hima Bindu G, Trivedi R, Kashyap VK (2005) Genotypic Polymorphisms at Seventeen Autosomal Short Tandem Repeat Loci in Four Tribal Populations of Andhra Pradesh, India. J Forensic Sci 50: 987-983.
    • (2005) J Forensic Sci , vol.50 , pp. 987-983
    • Hima Bindu, G.1    Trivedi, R.2    Kashyap, V.K.3
  • 24
    • 33746428394 scopus 로고    scopus 로고
    • Genetic structure of Indian populations based on fifteen autosomal microsatellite loci
    • Kashyap VK, Guha S, Sitalaximi T, Bindu GH, Hasnain SE, et al. (2006) Genetic structure of Indian populations based on fifteen autosomal microsatellite loci. BMC Genet 7: 28.
    • (2006) BMC Genet , vol.7 , pp. 28
    • Kashyap, V.K.1    Guha, S.2    Sitalaximi, T.3    Bindu, G.H.4    Hasnain, S.E.5
  • 25
    • 33644651816 scopus 로고    scopus 로고
    • Antiquity, geographic contiguity and genetic affinity among Tibeto-Burman populations of India: A microsatellite study
    • DOI 10.1080/03014460500424043, PII W03402474
    • Krithika S, Trivedi R, Kashyap VK, Vasulu TS (2006) Antiquity, geographic contiguity and genetic affinity among Tibeto-Burman populations of India: a microsatellite study. Ann Hum Biol 33:26-42. (Pubitemid 43323274)
    • (2006) Annals of Human Biology , vol.33 , Issue.1 , pp. 26-42
    • Krithika, S.1    Trivedi, R.2    Kashyap, V.K.3    Bharati, P.4    Vasulu, T.S.5
  • 26
    • 34347207588 scopus 로고    scopus 로고
    • Allele frequency distribution based on 17 STR markers in three major Dravidian linguistic populations of Andhra Pradesh, India
    • DOI 10.1016/j.forsciint.2006.04.012, PII S0379073806002726
    • Hima Bindu G, Trivedi R, Kashyap VK (2007) Allele frequency distribution based on 17 STR markers in three major Dravidian linguistic populations of Andhra Pradesh, India. Forensic Sci Int 170: 76-85. (Pubitemid 47007679)
    • (2007) Forensic Science International , vol.170 , Issue.1 , pp. 76-85
    • Hima Bindu, G.1    Trivedi, R.2    Kashyap, V.K.3
  • 27
    • 0036724830 scopus 로고    scopus 로고
    • A Genetic Landscape Reshaped by Recent Events: Y-Chromosomal Insights into Central Asia
    • Zerjal T, Wells RS, Yuldasheva N, Ruzibakiev R, Tyler-Smith C (2002) A Genetic Landscape Reshaped by Recent Events: Y-Chromosomal Insights into Central Asia. Am J Hum Genet 71: 446-482.
    • (2002) Am J Hum Genet , vol.71 , pp. 446-482
    • Zerjal, T.1    Wells, R.S.2    Yuldasheva, N.3    Ruzibakiev, R.4    Tyler-Smith, C.5
  • 30
    • 10044236413 scopus 로고    scopus 로고
    • Molecular evidence for absence of Y-linkage of the hairy ears trait
    • DOI 10.1038/sj.ejhg.5201271
    • Lee AC, Kamalam A, Adams SM and Jobling MA (2004) Molecular evidence for absence of Y-linkage of the Hairy Ears trait. Eur J Hum Genet 12: 1077-1079. (Pubitemid 39600137)
    • (2004) European Journal of Human Genetics , vol.12 , Issue.12 , pp. 1077-1079
    • Lee, A.C.1    Kamalam, A.2    Adams, S.M.3    Jobling, M.A.4
  • 31
  • 35
    • 33644871292 scopus 로고    scopus 로고
    • GENALEX 6: Genetic analysis in Excel. Population genetic software for teaching and research
    • DOI 10.1111/j.1471-8286.2005.01155.x
    • Peakall R, Smouse PE (2006) GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Mol Ecol Notes 6: 288-295. (Pubitemid 43373825)
    • (2006) Molecular Ecology Notes , vol.6 , Issue.1 , pp. 288-295
    • Peakall, R.1    Smouse, P.E.2
  • 36
    • 84867293252 scopus 로고    scopus 로고
    • GenAlEx 6.5: Genetic analysis in Excel. Population genetic software for teaching and research-an update
    • Peakall R, Smouse PE (2012) GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research-an update. Bioinformatics 28: 2537-2539.
    • (2012) Bioinformatics , vol.28 , pp. 2537-2539
    • Peakall, R.1    Smouse, P.E.2
  • 37
    • 55149090507 scopus 로고    scopus 로고
    • STORM: Software for testing hypotheses of relatedness and mating patterns
    • Frasier TR (2008) STORM: software for testing hypotheses of relatedness and mating patterns. Mol Ecol Resour 8: 1263-1266.
    • (2008) Mol Ecol Resour , vol.8 , pp. 1263-1266
    • Frasier, T.R.1
  • 38
    • 0027408678 scopus 로고
    • Similarity of DNA fingerprints due to chance and relatedness
    • Li CC, Weeks DE, Chakravarti A (1993) Similarity of DNA fingerprints due to chance and relatedness. Hum Hered 43: 45-52. (Pubitemid 23097294)
    • (1993) Human Heredity , vol.43 , Issue.1 , pp. 45-52
    • Li, C.C.1    Weeks, D.E.2    Chakravarti, A.3
  • 40
    • 84897494906 scopus 로고    scopus 로고
    • GraphPad Prism 6. GraphPad Software, Inc., 7825 Fay Avenue, Suite 230, La Jolla, CA 92037 USA Accessed 14 February 2014
    • GraphPad Prism 6. GraphPad Software, Inc., 7825 Fay Avenue, Suite 230, La Jolla, CA 92037 USA. Available: http://www.graphpad.com. Accessed 14 February 2014.
  • 41
    • 3543035788 scopus 로고    scopus 로고
    • Geographic patterns of (genetic, morphologic, linguistic) variation: How barriers can be detected by using Monmonier's algorithm
    • Manni F, Guérard E, Heyer E (2004) Geographic patterns of (genetic, morphologic, linguistic) variation: how barriers can be detected by "Mon-monier's algorithm". Hum Biol 76: 173-190 (Pubitemid 39014211)
    • (2004) Human Biology , vol.76 , Issue.2 , pp. 173-190
    • Manni, F.1    Guerard, E.2    Heyer, E.3
  • 42
    • 84897481172 scopus 로고    scopus 로고
    • Admix95. B. Bertoni, Genetics department, Universidad de la Republica, Montevideo, Urugay Accessed 14 February 2014
    • Admix95. B. Bertoni, Genetics department, Universidad de la Republica, Montevideo, Urugay. Available: http://www.genetica.fmed.edu.uy/software. htm. Accessed 14 February 2014.
  • 43
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard JK, Stephens M, Donnelly P (2000) Inference of population structure from multilocus genotype data. Genetics 155: 945-959. (Pubitemid 30397141)
    • (2000) Genetics , vol.155 , Issue.2 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 44
    • 0041817568 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data: Linked loci and correlated allele frequencies
    • Falush D, Stephens M, Pritchard JK (2003) Inference of population structure using multilocus genotype data: Linked loci and correlated allele frequencies. Genetics 164: 1567-1587. (Pubitemid 37102217)
    • (2003) Genetics , vol.164 , Issue.4 , pp. 1567-1587
    • Falush, D.1    Stephens, M.2    Pritchard, J.K.3
  • 45
    • 34447120219 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data: Dominant markers and null alleles
    • DOI 10.1111/j.1471-8286.2007.01758.x
    • Falush D, Stephens M, Pritchard JK (2007) Inference of population structure using multilocus genotype data: dominant markers and null alleles. Mol Ecol Notes 7: 574-578. (Pubitemid 47035522)
    • (2007) Molecular Ecology Notes , vol.7 , Issue.4 , pp. 574-578
    • Falush, D.1    Stephens, M.2    Pritchard, J.K.3
  • 46
    • 68949103876 scopus 로고    scopus 로고
    • Inferring weak population structure with the assistance of sample group information
    • Hubisz MJ, Falush D, Stephens M, Pritchard JK (2009) Inferring weak population structure with the assistance of sample group information. Mol Ecol Resour 9:1322-1332.
    • (2009) Mol Ecol Resour , vol.9 , pp. 1322-1332
    • Hubisz, M.J.1    Falush, D.2    Stephens, M.3    Pritchard, J.K.4
  • 47
    • 68949135552 scopus 로고    scopus 로고
    • FLOCK: A method for quick mapping of admixture without source samples
    • Duchesne P, Turgeon J (2009) FLOCK: a method for quick mapping of admixture without source samples. Mol Ecol Resour 9: 1333-1344.
    • (2009) Mol Ecol Resour , vol.9 , pp. 1333-1344
    • Duchesne, P.1    Turgeon, J.2
  • 48
    • 84867526071 scopus 로고    scopus 로고
    • FLOCK provides reliable solutions to the "number of Populations" problem
    • Duchesne P, Turgeon J (2012) FLOCK provides reliable solutions to the "Number of Populations" problem. J Hered 103: 734-743.
    • (2012) J Hered , vol.103 , pp. 734-743
    • Duchesne, P.1    Turgeon, J.2
  • 50
    • 66049089713 scopus 로고    scopus 로고
    • The global pattern of gene identity variation reveals a history of long-range migrations, bottlenecks, and local mate exchange: Implications for biological race
    • Hunley KL, Healy ME, Long JC (2009) The global pattern of gene identity variation reveals a history of long-range migrations, bottlenecks, and local mate exchange: implications for biological race. Am J Phys Anthropol 139: 35-45.
    • (2009) Am J Phys Anthropol , vol.139 , pp. 35-45
    • Hunley, K.L.1    Healy, M.E.2    Long, J.C.3
  • 51
    • 0030478757 scopus 로고    scopus 로고
    • Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data
    • Corunet JM, Luikart G (1996) Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data. Genetics 144: 2001-2014. (Pubitemid 26427944)
    • (1996) Genetics , vol.144 , Issue.4 , pp. 2001-2014
    • Cornuet, J.M.1    Luikart, G.2
  • 52
  • 53
    • 0030888985 scopus 로고    scopus 로고
    • Genetic differentiation and estimation of gene flow from F-statistics under isolation by distance
    • Rousset F (1997) Genetic differentiation and estimation of gene flow from F-statistics under isolation-by-distance. Genetics 145: 1219-1228. (Pubitemid 27149123)
    • (1997) Genetics , vol.145 , Issue.4 , pp. 1219-1228
    • Rousset, F.1
  • 54
    • 84897502177 scopus 로고    scopus 로고
    • Geographic Distance Matrix Generator (version 1.2.3). Ersts PJ, Center for Biodiversity and Conservation, American Museum of Natural History, New York, USA Accessed 14 February 2014
    • Geographic Distance Matrix Generator (version 1.2.3). Ersts PJ, Center for Biodiversity and Conservation, American Museum of Natural History, New York, USA. Available: http://biodiversityinformatics.amnh.org/open-source/gdmg. Accessed 14 February 2014.
  • 59
    • 84864592702 scopus 로고
    • Historical phonology of Gujarati vowels
    • Pandit PB (1961) Historical phonology of Gujarati vowels. Language 37: 54-66.
    • (1961) Language , vol.37 , pp. 54-66
    • Pandit, P.B.1
  • 60
    • 30244528973 scopus 로고
    • Indo-Aryan sibilants in Gujarati
    • Pandit PB (1954) Indo-Aryan sibilants in Gujarati. Indian Linguistics 14: 36-44.
    • (1954) Indian Linguistics , vol.14 , pp. 36-44
    • Pandit, P.B.1
  • 61
    • 0000675031 scopus 로고
    • Nasalisation, aspiration, and murmur in Gujarati
    • Pandit PB (1955-6b) Nasalisation, aspiration, and murmur in Gujarati. Indian Linguistics 17: 165-72.
    • (1955) Indian Linguistics , vol.17 , pp. 165-172
    • Pandit, P.B.1
  • 66
    • 84897497792 scopus 로고
    • Gujarati verb forms reconsidered
    • Joshi DM (1975) Gujarati verb forms reconsidered. Indian Linguistics 36 (3): 285-289.
    • (1975) Indian Linguistics , vol.36 , Issue.3 , pp. 285-289
    • Joshi, D.M.1
  • 68
    • 25444495255 scopus 로고    scopus 로고
    • Isolation by distance, web service
    • Accessed 14 February 2014
    • Jensen JL, Bohonak AJ, Kelley ST (2005) Isolation by distance, web service. BMC Genet 6: 13. Available: http://ibdws.sdsu.edu/. Accessed 14 February 2014.
    • (2005) BMC Genet , vol.6 , pp. 13
    • Jensen, J.L.1    Bohonak, A.J.2    Kelley, S.T.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.