Comparison of CE-MS/MS and LC-MS/MS sequencing demonstrates significant complementarity in natural peptide identification in human urine

Electrophoresis

Volumn 35, Issue 7, 2014, Pages 1060-1064

  Klein, Julie ^a   Papadopoulos, Theofilos ^b   Mischak, Harald ^a,c   Mullen, William ^c  

^a MOSAIQUES DIAGNOSTICS GMBH   (Germany)

^b Academy of Athens Biomedical Research Foundation   (Greece)

^c UNIVERSITY OF GLASGOW   (United Kingdom)

Author keywords

Biomarkers; Clinical proteomics; MS; Peptide sequencing

Indexed keywords

BODY FLUIDS; MOLECULAR BIOLOGY; PEPTIDES;

CLINICAL CONDITIONS; CLINICAL PROTEOMICS; HUMAN URINE; LC-MS-MS; MS; MS/MS SEQUENCING; NATURAL PEPTIDE; PEPTIDE IDENTIFICATION; PEPTIDE SEQUENCES; PEPTIDE SEQUENCING;

BIOMARKERS;

BIOLOGICAL MARKER; PROTEOME;

AMINO ACID ANALYSIS; AMINO ACID SEQUENCE; ARTICLE; CAPILLARY ELECTROPHORESIS; CONCENTRATION (PARAMETERS); CONTROLLED STUDY; FLOW RATE; HYDROPHOBICITY; INTERMETHOD COMPARISON; LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY; MOLECULAR WEIGHT; REPRODUCIBILITY; SENSITIVITY ANALYSIS; SEQUENCE ANALYSIS;

BIOMARKERS; CLINICAL PROTEOMICS; MS; PEPTIDE SEQUENCING;

CHROMATOGRAPHY, LIQUID; ELECTROPHORESIS, CAPILLARY; HUMANS; MALE; PEPTIDES; PROTEOME; PROTEOMICS; SEQUENCE ANALYSIS, PROTEIN; TANDEM MASS SPECTROMETRY;

EID: 84897410743     PISSN: 01730835     EISSN: 15222683     Source Type: Journal    
DOI: 10.1002/elps.201300327     Document Type: Article

References (15)

1. Mischak, H., Schanstra, J. P., Proteomics Clin. Appl. 2011, 5, 9-23.
2. Roscioni, S. S., de Zeeuw, D., Hellemons, M. E., Mischak, H., Zurbig, P., Bakker, S. J., Gansevoort, R. T., Reinhard, H., Persson, F., Lajer, M., Rossing, P., Lambers Heerspink, H. J., Diabetologia 2013, 56, 259-267.
3. Metzger, J., Negm, A. A., Plentz, R. R., Weismuller, T. J., Wedemeyer, J., Karlsen, T. H., Dakna, M., Mullen, W., Mischak, H., Manns, M. P., Lankisch, T. O., Gut 2013, 62, 122-130.
4. Theodorescu, D., Schiffer, E., Bauer, H. W., Douwes, F., Eichhorn, F., Polley, R., Schmidt, T., Schofer, W., Zurbig, P., Good, D. M., Coon, J. J., Mischak, H., Proteomics Clin. Appl. 2008, 2, 556-570.
5. Klein, J., Eales, J., Zurbig, P., Vlahou, A., Mischak, H., Stevens, R., Proteomics 2013, 13, 1077-1082.
6. Metzger, J., Chatzikyrkou, C., Broecker, V., Schiffer, E., Jaensch, L., Iphoefer, A., Mengel, M., Mullen, W., Mischak, H., Haller, H., Gwinner, W., Proteomics Clin. Appl. 2011, 5, 322-333.
7. Siwy, J., Zoja, C., Klein, J., Benigni, A., Mullen, W., Mayer, B., Mischak, H., Jankowski, J., Stevens, R., Vlahou, A., Kossida, S., Perco, P., Bahlmann, F. H., PLoS One 2012, 7, e51334.
8. Chalmers, M. J., Mackay, C. L., Hendrickson, C. L., Wittke, S., Walden, M., Mischak, H., Fliser, D., Just, I., Marshall, A. G., Anal. Chem. 2005, 77, 7163-7171.
9. Zurbig, P., Renfrow, M. B., Schiffer, E., Novak, J., Walden, M., Wittke, S., Just, I., Pelzing, M., Neususs, C., Theodorescu, D., Root, K. E., Ross, M. M., Mischak, H., Electrophoresis 2006, 27, 2111-2125.
10. Mischak, H., Kolch, W., Aivaliotis, M., Bouyssie, D., Court, M., Dihazi, H., Dihazi, G. H., Franke, J., Garin, J., Gonzalez de Peredo, A., Iphofer, A., Jansch, L., Lacroix, C., Makridakis, M., Masselon, C., Metzger, J., Monsarrat, B., Mrug, M., Norling, M., Novak, J., Pich, A., Pitt, A., Bongcam-Rudloff, E., Siwy, J., Suzuki, H., Thongboonkerd, V., Wang, L. S., Zoidakis, J., Zurbig, P., Schanstra, J. P., Vlahou, A., Proteomics Clin. Appl. 2010, 4, 464-478.
11. Haubitz, M., Good, D. M., Woywodt, A., Haller, H., Rupprecht, H., Theodorescu, D., Dakna, M., Coon, J. J., Mischak, H., Mol. Cell Proteomics 2009, 8, 2296-2307.
12. Jantos-Siwy, J., Schiffer, E., Brand, K., Schumann, G., Rossing, K., Delles, C., Mischak, H., Metzger, J., J. Proteome. Res. 2009, 8, 268-281.
13. Kistler, A. D., Mischak, H., Poster, D., Dakna, M., Wuthrich, R. P., Serra, A. L., Kidney Int. 2009, 76, 89-96.
14. Zurbig, P., Schiffer, E., Mischak, H., Methods Mol. Biol. 2009, 564, 105-121.
15. Klein, J., Jupp, S., Moulos, P., Fernandez, M., Buffin-Meyer, B., Casemayou, A., Chaaya, R., Charonis, A., Bascands, J. L., Stevens, R., Schanstra, J. P., Faseb. J. 2012, 26, 2145-2153.