-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
DOI 10.1093/nar/25.17.3389
-
Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25:3389-3402 (Pubitemid 27359211)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.17
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
84855837348
-
Complete genome sequence of Acidaminococcus intestini RYC-MR95, a Gram-negative bacterium from the phylum Firmicutes
-
D'Auria G, Galan J-C, Rodriguez-Alcayna M, Moya A, Baquero F, Latorre A (2011) Complete genome sequence of Acidaminococcus intestini RYC-MR95, a Gram-negative bacterium from the phylum Firmicutes. J Bacteriol 193:7008-7009
-
(2011)
J Bacteriol
, vol.193
, pp. 7008-7009
-
-
D'Auria, G.1
Galan, J.-C.2
Rodriguez-Alcayna, M.3
Moya, A.4
Baquero, F.5
Latorre, A.6
-
3
-
-
79960739830
-
Origin of diderm (Gram-negative) bacteria: Antibiotic selection pressure rather than endosymbiosis likely led to the evolution of bacterial cells with two membranes
-
Gupta RS (2011) Origin of diderm (Gram-negative) bacteria: antibiotic selection pressure rather than endosymbiosis likely led to the evolution of bacterial cells with two membranes. Anton Van Leeuwenhoek 100:171-182
-
(2011)
Anton Van Leeuwenhoek
, vol.100
, pp. 171-182
-
-
Gupta, R.S.1
-
4
-
-
0034992826
-
The closest BLAST hit is often not the nearest neighbor
-
Koski LB, Golding GB (2001) The closest BLAST hit is often not the nearest neighbor. J Mol Evol 52:540-542 (Pubitemid 32507075)
-
(2001)
Journal of Molecular Evolution
, vol.52
, Issue.6
, pp. 540-542
-
-
Koski, L.B.1
Golding, G.B.2
-
5
-
-
77953297034
-
Negativicoccus succinicivorans gen. Nov., sp nov., isolated from human clinical samples, emended description of the family Veillonellaceae and description of Negativicutes classis nov., Selenomonadales ord. Nov and Acidaminococcaceae fam. Nov in the bacterial phylum Firmicutes
-
Marchandin H, Teyssier C, Campos J, Jean-Pierre H, Roger F, Gay B, Carlier J-P, Jumas-Bilak E (2010) Negativicoccus succinicivorans gen. nov., sp nov., isolated from human clinical samples, emended description of the family Veillonellaceae and description of Negativicutes classis nov., Selenomonadales ord. nov and Acidaminococcaceae fam. nov in the bacterial phylum Firmicutes. Int J Syst Evol Microbiol 60:1271-1279
-
(2010)
Int J Syst Evol Microbiol
, vol.60
, pp. 1271-1279
-
-
Marchandin, H.1
Teyssier, C.2
Campos, J.3
Jean-Pierre, H.4
Roger, F.5
Gay, B.6
Carlier, J.-P.7
Jumas-Bilak, E.8
-
6
-
-
58449113058
-
Genome analysis of the anaerobic thermohalophilic bacterium Halothermothrix orenii
-
Mavromatis K, Ivanova N, Anderson I, Lykidis A, Hooper SD, Sun H, Kunin V, Lapidus A, Hugenholtz P, Patel B, Kyrpides NC (2009) Genome analysis of the anaerobic thermohalophilic bacterium Halothermothrix orenii. PLoS ONE 4:e4192
-
(2009)
PLoS ONE
, vol.4
-
-
Mavromatis, K.1
Ivanova, N.2
Anderson, I.3
Lykidis, A.4
Hooper, S.D.5
Sun, H.6
Kunin, V.7
Lapidus, A.8
Hugenholtz, P.9
Patel, B.10
Kyrpides, N.C.11
-
7
-
-
77955257609
-
An alternative route for UDP-diacylglucosamine hydrolysis in bacterial lipid A synthesis
-
Metzget LE IV, Raetz CRH (2010) An alternative route for UDP-diacylglucosamine hydrolysis in bacterial lipid A synthesis. Biochemistry 49:6715-6726
-
(2010)
Biochemistry
, vol.49
, pp. 6715-6726
-
-
Metzget IV, L.E.1
Raetz, C.R.H.2
-
8
-
-
79958052441
-
The genome of Erysipelothrix rhusiopathiae, the causative agent of swine erysipelas, reveals new insights into the evolution of Firmicutes and the organism's intracellular adaptations
-
Ogawa Y, Ooka T, Shi F, Ogura Y, Nakayama K, Hayashi T, Shimoji Y (2011) The genome of Erysipelothrix rhusiopathiae, the causative agent of swine erysipelas, reveals new insights into the evolution of Firmicutes and the organism's intracellular adaptations. J Bacteriol 193:2959-2971
-
(2011)
J Bacteriol
, vol.193
, pp. 2959-2971
-
-
Ogawa, Y.1
Ooka, T.2
Shi, F.3
Ogura, Y.4
Nakayama, K.5
Hayashi, T.6
Shimoji, Y.7
-
10
-
-
84883116930
-
PhyloPhlAn is a new method for improved phylogenetic and taxonomic placement of microbes
-
doi:10.1038/ncomms3304
-
Segata N, Boernigen D, Morgan XC, Huttenhower C (2013) PhyloPhlAn is a new method for improved phylogenetic and taxonomic placement of microbes. Nat Commun 4:2304. doi:10.1038/ncomms3304
-
(2013)
Nat Commun
, vol.4
, pp. 2304
-
-
Segata, N.1
Boernigen, D.2
Morgan, X.C.3
Huttenhower, C.4
-
11
-
-
77956988767
-
A phylum level perspective on bacterial cell envelope architecture
-
Sutcliffe IC (2010) A phylum level perspective on bacterial cell envelope architecture. Trends Microbiol 18:464-470
-
(2010)
Trends Microbiol
, vol.18
, pp. 464-470
-
-
Sutcliffe, I.C.1
-
12
-
-
84862901721
-
A phylum level analysis reveals lipoprotein biosynthesis to be a fundamental property of bacteria
-
Sutcliffe IC, Harrington DJ, Hutchings MI (2012) A phylum level analysis reveals lipoprotein biosynthesis to be a fundamental property of bacteria. Protein Cell 3:163-170
-
(2012)
Protein Cell
, vol.3
, pp. 163-170
-
-
Sutcliffe, I.C.1
Harrington, D.J.2
Hutchings, M.I.3
-
13
-
-
80052294350
-
Peptidoglycan remodeling and conversion of an inner membrane into an outer membrane during sporulation
-
Tocheva E, Matson EG, Morris DM, Moussavi F, Leadbetter JR, Jensen GJ (2011) Peptidoglycan remodeling and conversion of an inner membrane into an outer membrane during sporulation. Cell 146:799-812
-
(2011)
Cell
, vol.146
, pp. 799-812
-
-
Tocheva, E.1
Matson, E.G.2
Morris, D.M.3
Moussavi, F.4
Leadbetter, J.R.5
Jensen, G.J.6
-
14
-
-
84869495206
-
Evolution of the β-barrel assembly machinery
-
Webb CT, Heinz E, Lithgow T (2013) Evolution of the β-barrel assembly machinery. Trends Microbiol 20:612-620
-
(2013)
Trends Microbiol
, vol.20
, pp. 612-620
-
-
Webb, C.T.1
Heinz, E.2
Lithgow, T.3
-
15
-
-
84885176098
-
A genomic update on clostridial phylogeny: Gram-negative spore formers and other misplaced clostridia
-
Yutin N, Galperin MY (2013) A genomic update on clostridial phylogeny: gram-negative spore formers and other misplaced clostridia. Environ Microbiol 15:2631-2641
-
(2013)
Environ Microbiol
, vol.15
, pp. 2631-2641
-
-
Yutin, N.1
Galperin, M.Y.2
|