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Volumn 111, Issue 12, 2014, Pages 4548-4553

Specific inhibition of diverse pathogens in human cells by synthetic microRNA-like oligonucleotides inferred from RNAi screens

Author keywords

Antimicrobials; High throughput RNAi screening

Indexed keywords

MESSENGER RNA; MICRORNA; SMALL INTERFERING RNA;

EID: 84897002829     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1402353111     Document Type: Article
Times cited : (56)

References (33)
  • 1
    • 0037372027 scopus 로고    scopus 로고
    • Tailoring the genome: The power of genetic approaches
    • DOI 10.1038/ng1115
    • Nagy A, Perrimon N, Sandmeyer S, Plasterk R (2003) Tailoring the genome: The power of genetic approaches. Nat Genet 33(Suppl):276-284. (Pubitemid 36278837)
    • (2003) Nature Genetics , vol.33 , Issue.SUPPL. , pp. 276-284
    • Nagy, A.1    Perrimon, N.2    Sandmeyer, S.3    Plasterk, R.4
  • 2
    • 84873729095 scopus 로고    scopus 로고
    • Multiplex genome engineering using CRISPR/Cas systems
    • Cong L, et al. (2013) Multiplex genome engineering using CRISPR/Cas systems. Science 339(6121):819-823.
    • (2013) Science , vol.339 , Issue.6121 , pp. 819-823
    • Cong, L.1
  • 3
    • 84873734105 scopus 로고    scopus 로고
    • RNA-guided human genome engineering via Cas9
    • Mali P, et al. (2013) RNA-guided human genome engineering via Cas9. Science 339(6121):823-826.
    • (2013) Science , vol.339 , Issue.6121 , pp. 823-826
    • Mali, P.1
  • 4
    • 79551685675 scopus 로고    scopus 로고
    • A TALE nuclease architecture for efficient genome editing
    • Miller JC, et al. (2011) A TALE nuclease architecture for efficient genome editing. Nat Biotechnol 29(2):143-148.
    • (2011) Nat Biotechnol , vol.29 , Issue.2 , pp. 143-148
    • Miller, J.C.1
  • 5
    • 79751487297 scopus 로고    scopus 로고
    • Efficient construction of sequence-specific TAL effectors for modulating mammalian transcription
    • Zhang F, et al. (2011) Efficient construction of sequence-specific TAL effectors for modulating mammalian transcription. Nat Biotechnol 29(2):149-153.
    • (2011) Nat Biotechnol , vol.29 , Issue.2 , pp. 149-153
    • Zhang, F.1
  • 6
    • 84867594876 scopus 로고    scopus 로고
    • RNAi screening: New approaches, understandings, and organisms
    • Mohr SE, Perrimon N (2012) RNAi screening: New approaches, understandings, and organisms. Wiley Interdiscip Rev RNA 3(2):145-158.
    • (2012) Wiley Interdiscip Rev RNA , vol.3 , Issue.2 , pp. 145-158
    • Mohr, S.E.1    Perrimon, N.2
  • 8
    • 72549116887 scopus 로고    scopus 로고
    • The IFITM proteins mediate cellular resistance to influenza A H1N1 virus, West Nile virus, and dengue virus
    • Brass AL, et al. (2009) The IFITM proteins mediate cellular resistance to influenza A H1N1 virus, West Nile virus, and dengue virus. Cell 139(7):1243-1254.
    • (2009) Cell , vol.139 , Issue.7 , pp. 1243-1254
    • Brass, A.L.1
  • 9
    • 77949349635 scopus 로고    scopus 로고
    • Identification of host factors involved in borna disease virus cell entry through a small interfering RNA functional genetic screen
    • Clemente R, Sisman E, Aza-Blanc P, de la Torre JC (2010) Identification of host factors involved in borna disease virus cell entry through a small interfering RNA functional genetic screen. J Virol 84(7):3562-3575.
    • (2010) J Virol , vol.84 , Issue.7 , pp. 3562-3575
    • Clemente, R.1    Sisman, E.2    Aza-Blanc, P.3    De La Torre, J.C.4
  • 10
    • 76749090540 scopus 로고    scopus 로고
    • Genome-wide RNAi screen identifies human host factors crucial for influenza virus replication
    • Karlas A, et al. (2010) Genome-wide RNAi screen identifies human host factors crucial for influenza virus replication. Nature 463(7282):818-822.
    • (2010) Nature , vol.463 , Issue.7282 , pp. 818-822
    • Karlas, A.1
  • 11
    • 51649095289 scopus 로고    scopus 로고
    • RNA interference screen for human genes associated with West Nile virus infection
    • Krishnan MN, et al. (2008) RNA interference screen for human genes associated with West Nile virus infection. Nature 455(7210):242-245.
    • (2008) Nature , vol.455 , Issue.7210 , pp. 242-245
    • Krishnan, M.N.1
  • 12
    • 84868139128 scopus 로고    scopus 로고
    • RNAi screening reveals proteasome- and Cullin3-dependent stages in vaccinia virus infection
    • Mercer J, et al. (2012) RNAi screening reveals proteasome- and Cullin3-dependent stages in vaccinia virus infection. Cell Rep 2(4):1036-1047.
    • (2012) Cell Rep , vol.2 , Issue.4 , pp. 1036-1047
    • Mercer, J.1
  • 13
    • 79952732716 scopus 로고    scopus 로고
    • RNAi screen of Salmonella invasion shows role of COPI in membrane targeting of cholesterol and Cdc42
    • Misselwitz B, et al. (2011) RNAi screen of Salmonella invasion shows role of COPI in membrane targeting of cholesterol and Cdc42. Mol Syst Biol 7:474.
    • (2011) Mol Syst Biol , vol.7 , pp. 474
    • Misselwitz, B.1
  • 14
    • 61849160363 scopus 로고    scopus 로고
    • A functional genomic screen identifies cellular cofactors of hepatitis C virus replication
    • Tai AW, et al. (2009) A functional genomic screen identifies cellular cofactors of hepatitis C virus replication. Cell Host Microbe 5(3):298-307.
    • (2009) Cell Host Microbe , vol.5 , Issue.3 , pp. 298-307
    • Tai, A.W.1
  • 15
    • 55249088255 scopus 로고    scopus 로고
    • Genome-scale RNAi screen for host factors required for HIV replication
    • Zhou H, et al. (2008) Genome-scale RNAi screen for host factors required for HIV replication. Cell Host Microbe 4(5):495-504.
    • (2008) Cell Host Microbe , vol.4 , Issue.5 , pp. 495-504
    • Zhou, H.1
  • 16
    • 84876573362 scopus 로고    scopus 로고
    • GenomeRNAi: A database for cell-based and in vivo RNAi phenotypes, 2013 update
    • Schmidt EE, et al. (2013) GenomeRNAi: A database for cell-based and in vivo RNAi phenotypes, 2013 update. Nucleic Acids Res 41(Database issue):D1021-D1026.
    • (2013) Nucleic Acids Res , vol.41 , Issue.DATABASE ISSUE
    • Schmidt, E.E.1
  • 17
    • 67249143012 scopus 로고    scopus 로고
    • Host cell factors in HIV replication: Meta-analysis of genome-wide studies
    • Bushman FD, et al. (2009) Host cell factors in HIV replication: Meta-analysis of genome-wide studies. PLoS Pathog 5(5):e1000437.
    • (2009) PLoS Pathog , vol.5 , Issue.5
    • Bushman, F.D.1
  • 18
    • 74049124186 scopus 로고    scopus 로고
    • Recognizing and avoiding siRNA off-target effects for target identification and therapeutic application
    • Jackson AL, Linsley PS (2010) Recognizing and avoiding siRNA off-target effects for target identification and therapeutic application. Nat Rev Drug Discov 9(1):57-67.
    • (2010) Nat Rev Drug Discov , vol.9 , Issue.1 , pp. 57-67
    • Jackson, A.L.1    Linsley, P.S.2
  • 19
    • 33745612464 scopus 로고    scopus 로고
    • Widespread siRNA "off-target" transcript silencing mediated by seed region sequence complementarity
    • DOI 10.1261/rna.25706
    • Jackson AL, et al. (2006) Widespread siRNA "off-target" transcript silencing mediated by seed region sequence complementarity. RNA 12(7):1179-1187. (Pubitemid 43990543)
    • (2006) RNA , vol.12 , Issue.7 , pp. 1179-1187
    • Jackson, A.L.1    Burchard, J.2    Schelter, J.3    Chau, B.N.4    Cleary, M.5    Lim, L.6    Linsley, P.S.7
  • 20
    • 33646188259 scopus 로고    scopus 로고
    • 3? UTR seed matches, but not overall identity, are associated with RNAi off-targets
    • Birmingham A, et al. (2006) 3? UTR seed matches, but not overall identity, are associated with RNAi off-targets. Nat Methods 3(3):199-204.
    • (2006) Nat Methods , vol.3 , Issue.3 , pp. 199-204
    • Birmingham, A.1
  • 21
    • 84861752176 scopus 로고    scopus 로고
    • siRNA off-target effects in genome-wide screens identify signaling pathway members
    • Buehler E, et al. (2012) siRNA off-target effects in genome-wide screens identify signaling pathway members. Sci Rep 2:428.
    • (2012) Sci Rep , vol.2 , pp. 428
    • Buehler, E.1
  • 23
    • 84859065278 scopus 로고    scopus 로고
    • Common seed analysis to identify offtarget effects in siRNA screens
    • Marine S, Bahl A, Ferrer M, Buehler E (2012) Common seed analysis to identify offtarget effects in siRNA screens. J Biomol Screen 17(3):370-378.
    • (2012) J Biomol Screen , vol.17 , Issue.3 , pp. 370-378
    • Marine, S.1    Bahl, A.2    Ferrer, M.3    Buehler, E.4
  • 24
    • 80052890070 scopus 로고    scopus 로고
    • Off-target effects dominate a large-scale RNAi screen for modulators of the TGF-β pathway and reveal microRNA regulation of TGFBR2
    • Schultz N, et al. (2011) Off-target effects dominate a large-scale RNAi screen for modulators of the TGF-β pathway and reveal microRNA regulation of TGFBR2. Silence 2:3.
    • (2011) Silence , vol.2 , pp. 3
    • Schultz, N.1
  • 25
    • 84859218649 scopus 로고    scopus 로고
    • A bioinformatics method identifies prominent off-targeted transcripts in RNAi screens
    • Sigoillot FD, et al. (2012) A bioinformatics method identifies prominent off-targeted transcripts in RNAi screens. Nat Methods 9(4):363-366.
    • (2012) Nat Methods , vol.9 , Issue.4 , pp. 363-366
    • Sigoillot, F.D.1
  • 26
    • 34948862521 scopus 로고    scopus 로고
    • Bunyaviridae
    • ed Fields KD (Lippincott, Williams & Wilkins, Philadelphia)
    • Schmaljohn C, Nichol S (2007) Bunyaviridae. Virology, ed Fields KD (Lippincott, Williams & Wilkins, Philadelphia), pp 1741-1788.
    • (2007) Virology , pp. 1741-1788
    • Schmaljohn, C.1    Nichol, S.2
  • 27
    • 70349466529 scopus 로고    scopus 로고
    • Population context determines cell-to-cell variability in endocytosis and virus infection
    • Snijder B, et al. (2009) Population context determines cell-to-cell variability in endocytosis and virus infection. Nature 461(7263):520-523.
    • (2009) Nature , vol.461 , Issue.7263 , pp. 520-523
    • Snijder, B.1
  • 28
    • 84860187343 scopus 로고    scopus 로고
    • Single-cell analysis of population context advances RNAi screening at multiple levels
    • Snijder B, et al. (2012) Single-cell analysis of population context advances RNAi screening at multiple levels. Mol Syst Biol 8(1):579.
    • (2012) Mol Syst Biol , vol.8 , Issue.1 , pp. 579
    • Snijder, B.1
  • 29
    • 80455154984 scopus 로고    scopus 로고
    • Weak seed-pairing stability and high target-site abundance decrease the proficiency of lsy-6 and other microRNAs
    • Garcia DM, et al. (2011) Weak seed-pairing stability and high target-site abundance decrease the proficiency of lsy-6 and other microRNAs. Nat Struct Mol Biol 18(10): 1139-1146.
    • (2011) Nat Struct Mol Biol , vol.18 , Issue.10 , pp. 1139-1146
    • Garcia, D.M.1
  • 30
    • 84871214022 scopus 로고    scopus 로고
    • MiRmap: Comprehensive prediction of microRNA target repression strength
    • Vejnar CE, Zdobnov EM (2012) MiRmap: Comprehensive prediction of microRNA target repression strength. Nucleic Acids Res 40(22):11673-11683.
    • (2012) Nucleic Acids Res , vol.40 , Issue.22 , pp. 11673-11683
    • Vejnar, C.E.1    Zdobnov, E.M.2
  • 31
    • 79960681800 scopus 로고    scopus 로고
    • miRTar: An integrated system for identifying miRNA-target interactions in human
    • Hsu JB, et al. (2011) miRTar: An integrated system for identifying miRNA-target interactions in human. BMC Bioinformatics 12:300.
    • (2011) BMC Bioinformatics , vol.12 , pp. 300
    • Hsu, J.B.1
  • 32
    • 84856455440 scopus 로고    scopus 로고
    • On target: A public repository for large-scale RNAi experiments
    • Shamu CE, Wiemann S, BoutrosM(2012) On target: A public repository for large-scale RNAi experiments. Nat Cell Biol 14(2):115.
    • (2012) Nat Cell Biol , vol.14 , Issue.2 , pp. 115
    • Shamu, C.E.1    Wiemann, S.2    Boutros, M.3
  • 33
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Benjamini Y, Hochberg Y (1995) Controlling the false discovery rate: A practical and powerful approach to multiple testing. J R Stat Soc, B 57(1):289-300.
    • (1995) J R Stat Soc, B , vol.57 , Issue.1 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2


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