A carbon nanotubes based fluorescent aptasensor for highly sensitive detection of adenosine deaminase activity and inhibitor screening in natural extracts

Journal of Pharmaceutical and Biomedical Analysis

Volumn 95, Issue , 2014, Pages 164-168

  Hu, Kun ^a   Huang, Yong ^a   wang, Sheng'e ^a   Zhao, Shulin ^a  

^a GUANGXI NORMAL UNIVERSITY   (China)

Author keywords

Adenosine deaminase; Aptasensor; Carbon nanotubes; Fluorescence; Inhibition

Indexed keywords

ADENOSINE DEAMINASE; ADENOSINE DEAMINASE INHIBITOR; APTAMER; FLUORESCENT DYE; INOSINE; MULTI WALLED NANOTUBE; PLANT EXTRACT; CARBON NANOTUBE;

ARTICLE; CHINESE MEDICINE; CONTROLLED STUDY; COST EFFECTIVENESS ANALYSIS; DRUG INHIBITION; DRUG SCREENING; ENZYME ACTIVITY; ENZYME KINETICS; ENZYME SUBSTRATE; FLUORESCENCE SPECTROSCOPY; LABELING INDEX; LIMIT OF DETECTION; NONHUMAN; PRIORITY JOURNAL; SENSITIVITY AND SPECIFICITY; CHEMISTRY; FLUORESCENCE; GENETIC PROCEDURES; METABOLISM; PROCEDURES;

ADENOSINE DEAMINASE; ADENOSINE DEAMINASE INHIBITORS; BIOSENSING TECHNIQUES; DRUG EVALUATION, PRECLINICAL; FLUORESCENCE; MEDICINE, CHINESE TRADITIONAL; NANOTUBES, CARBON; PLANT EXTRACTS;

EID: 84896997224     PISSN: 07317085     EISSN: 1873264X     Source Type: Journal    
DOI: 10.1016/j.jpba.2014.02.027     Document Type: Article

References (28)

1. Conway E.J., Cooke R. The deaminases of adenosine and adenylic acid in blood and tissues. Biochem. J. 1939, 33:479-492.
2. Gupta B.K., Bharat V., Bandyopadhyay D. Role of adenosine deaminase estimation in differentiation of tuberculous and non-tuberculous exudative pleural effusions. J. Clin. Med. Res. 2010, 2:79-84.
3. Hershfied M.S. Genotype is an important determinant of phenotype in adenosine deaminase deficiency. Curr. Opin. Immunol. 2003, 15:571-577.
4. Linden J. Molecular approach to adenosine receptors: receptor-mediated mechanisms of tissue protection. Annu. Rev. Pharmacol. Toxicol. 2001, 41:775-787.
5. Paul M.K., Grover V., Mukhopadhyay A.K. Merits of HPLC-based method over spectrophotometric method for assessing the kinetics and inhibition of mammalian adenosine deaminase. J. Chromatogr. B 2005, 822:146-153.
6. Vielh P., Castellazzi M.J. A colorimetric assay for serial determination of adenosine deaminase activity in small lymphocyte populations. J. Immunol. Methods 1984, 73:313-320.
7. Li W., Liu Z.L., Lin H., Nie Z., Chen J.H., Xu X.H., Yao S.Z. Label-free colorimetric assay for methyltransferase activity based on a novel methylation-responsive DNAzyme strategy. Anal. Chem. 2010, 82:1935-1941.
8. Huang Y., Zhao S.L., Liang H., Chen Z.F., Liu Y.M. Multiplex detection of endonucleases by using a multicolor gold nanobeacon. Chem. Eur. J. 2011, 17:7313-7319.
9. Hu D., Pu F., Huang Z.Z., Ren J.S., Qu X.G. A quadruplex-based, label-free, and real-time fluorescence assay for RNase H activity and inhibition. Chem. Eur. J. 2010, 16:2605-2610.
10. He K.Y., Li W., Nie Z., Huang Y., Liu Z.L., Nie L.H., Yao S.Z. Enzyme-regulated activation of DNAzyme: a novel strategy for a label-free colorimetric DNA ligase assay and ligase-based biosensing. Chem. Eur. J. 2012, 18:3992-3999.
11. Tuerk C., Gold L. Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase. Science 1990, 249:505-510.
12. Zhang K., Zhu X.L., Wang J., Xu L.L., Li G.X. Strategy to fabricate an electrochemical aptasensor: application to the assay of adenosine deaminase activity. Anal. Chem. 2010, 82:3207-3211.
13. Zhao W.A., Chiuman W., Lam J.C.F., McManus S.A., Chen W., Cui Y.G., Pelton G., Brook M.A., Li Y.F. DNA aptamer folding on gold nanoparticles: from colloid chemistry to biosensors. J. Am. Chem. Soc. 2008, 130:3610-3618.
14. Elowe N.H., Nutiu R., Hassani A.A., Cechetto J.D., Hughes D.W., Li Y.F., Brown E.D. Small-molecule screening made simple for a difficult target with a signaling nucleic acid aptamer that reports on deaminase activity. Angew. Chem. Int. Ed. 2006, 45:5648-5652.
15. Yang W., Ratinac K.R., Ringer S.P., Thordarson P., Gooding J.J., Braet F. Carbon nanomaterials in biosensors: should you use nanotubes or graphene?. Angew. Chem. Int. Ed. 2010, 49:2114-2138.
16. Lu C.H., Yang H.H., Zhu C.L., Chen X., Chen G.N. A graphene platform for sensing biomolecules. Angew. Chem. Int. Ed. 2009, 48:4785-4787.
17. He S.J., Song B., Li D., Zhu C.F., Qi W.P., Wen Y.Q., Wang L.H., Song S.P., Fang H.P., Fan C.H. A graphene nanoprobe for rapid, sensitive, and multicolor fluorescent DNA analysis. Adv. Funct. Mater. 2010, 20:453-459.
18. Liu X.Q., Aizen R., Freeman R., Yehezkeli O., Willner I. Multiplexed aptasensors and amplified DNA sensors using functionalized graphene oxide: application for logic gate operations. ACS Nano 2012, 6:3553-3563.
19. Tasis D., Tagmatarchis N., Bianco A., Prato M. Chemistry of carbon nanotubes. Chem. Rev. 2006, 106:1105-1136.
20. Ajayan P.M. Nanotubes from carbon. Chem. Rev. 1999, 99:1787-1799.
21. Yang R.H., Jin J.Y., Chen Y., Shao N., Kang H.Z., Xiao Z.Y., Tang Z.W., Wu Y.R., Zhu Z., Tan W.H. Carbon nanotube-quenched fluorescent oligonucleotides: probes that fluoresce upon hybridization. J. Am. Chem. Soc. 2008, 130:8351-8358.
22. Zhen S.J., Chen L.Q., Xiao S.J., Li Y.F., Hu P.P., Zhan L., Peng L., Song E.Q., Huang C.Z. Carbon nanotubes as a low background signal platform for a molecular aptamer beacon on the basis of long-range resonance energy transfer. Anal. Chem. 2010, 82:8432-8437.
23. Chen H., Wang J.Q., Liang G.H., Zhang P., Kong J.L. A novel exonuclease III aided amplification method for sensitive nucleic acid detection based on single walled carbon nanotube induced quenching. Chem. Commun. 2012, 48:269-271.
24. Li F., Zhang J., Cao X.N., Wang L.H., Li D., Song S.P., Ye B.C., Fan C.H. Adenosine detection by using gold nanoparticles and designed aptamer sequences. Analyst 2009, 134:1355-1360.
25. He P., Bayachou M. Layer-by-layer fabrication and characterization of DNA-wrapped single-walled carbon nanotube particles. Langmuir 2005, 21:6086-6092.
26. Gabellieri E., Bernini S., Piras L., Cioni P., Balestreri E., Cercignani G., Felicioli R. Purification, stability and kinetic properties of highly purified adenosine deaminase from Bacillus cereus NCIB 8122. Biochim. Biophys. Acta 1986, 884:490-496.
27. Hodgson R.J., Besanger T.R., Brook M.A., Brennan J.D. Inhibitor screening using immobilized enzyme reactor chromatography/mass spectrometry. Anal. Chem. 2005, 77:7512-7519.
28. Ji X.W., Ye F.G., Lin P.T., Zhao S.L. Immobilized capillary adenosine deaminase microreactor for inhibitor screening. Talanta 2010, 82:1170-1174.