Side-chain control of porosity closure in single-and multiple-peptide-based porous materials by cooperative folding

Nature Chemistry

Volumn 6, Issue 4, 2014, Pages 343-351

  Marti Gastaldo C ^a   Antypov, D ^a   Warren, J E ^a   Briggs, M E ^a   Chater, P A ^a   Wiper, P V ^a   Miller, G J ^a   Khimyak, Y Z ^a,b   Darling, G R ^a   Berry, N G ^a   Rosseinsky, M J ^a  

^a UNIVERSITY OF LIVERPOOL   (United Kingdom)

^b UNIVERSITY OF EAST ANGLIA   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

PEPTIDE;

ARTICLE; CHEMICAL STRUCTURE; CHEMISTRY; HYDROGEN BOND; NUCLEAR MAGNETIC RESONANCE; PROTEIN CONFORMATION; PROTEIN FOLDING;

HYDROGEN BONDING; MODELS, MOLECULAR; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; PEPTIDES; PROTEIN CONFORMATION; PROTEIN FOLDING;

EID: 84896945666     PISSN: 17554330     EISSN: 17554349     Source Type: Journal    
DOI: 10.1038/nchem.1871     Document Type: Article

References (44)

1. Zhou, H-C., Long, J. R. & Yaghi, O. M. Introduction to metal-organic frameworks. Chem. Rev. 112, 673-674 (2012).
2. Li, J. R., Kuppler, R. J. & Zhou, H. C. Selective gas adsorption and separation in metal-organic frameworks. Chem. Soc. Rev. 38, 1477-1504 (2009).
3. Yang, W. et al. Selective CO2 uptake and inverse CO2/C2H2 selectivity in a dynamic bifunctional metal-organic framework. Chem. Sci. 3, 2993-2999 (2012).
4. Dhakshinamoorthy, A. & García, H. Catalysis by metal nanoparticles embedded on metal-organic frameworks. Chem. Soc. Rev. 41, 5262-5284 (2012).
5. Lee, J-Y. et al. Metal-organic framework materials as catalysts. Chem. Soc. Rev. 38, 1450-1459 (2009).
6. Rocca, D. J., Liu, D. & Lin, W. Nanoscale metal-organic frameworks for biomedical imaging and drug delivery. Acc. Chem. Res. 44, 957-968 (2011).
7. Bauer, C. A. et al. Influence of connectivity and porosity on ligand-based luminescence in zinc metal-organic frameworks. J. Am. Chem. Soc. 129, 7136-7144 (2007).
8. Ferrando-Soria, J. et al. Highly selective chemical sensing in a luminescent nanoporous magnet. Adv. Mater. 24, 5625-5629 (2012).
9. Deng, H. et al. Large-pore apertures in a series of metal-organic frameworks. Science 336, 1018-1023 (2012).
10. Guillerm, V. et al. A series of isoreticular, highly stable, porous zirconium oxide based metal-organic frameworks. Angew. Chem. Int. Ed. 51, 9267-9271 (2012).
11. Hasegawa, S. et al. Three-dimensional porous coordination polymer functionalized with amide groups based on tridentate ligand: Selective sorption and catalysis. J. Am. Chem. Soc. 129, 2607-2614 (2007).
12. Barrio, J. et al. Control of porosity geometry in amino acid derived nanoporous materials. Chem. Eur. J. 14, 4521-4532 (2008).
13. An, J., Geib, S. J. & Rosi, N. L. High and selective CO2 uptake in a cobalt adeninate metal-organic framework exhibiting pyrimidine-And aminodecorated pores. J. Am. Chem. Soc. 132, 38-39 (2009).
14. Imaz, I. et al. Metal-biomolecule frameworks (MBioFs). Chem. Commun. 47, 7287-7302 (2011).
15. Boehr, D. D., Nussinov, R. & Wright, P. E. The role of dynamic conformational ensembles in biomolecular recognition. Nature Chem. Biol. 5, 789-796 (2009).
16. Rabone, J. et al. An adaptable peptide-based porous material. Science 329, 1053-1057 (2010).
17. Martí-Gastaldo, C., Warren, J. E., Stylianou, K., Flack, N. L. O. & Rosseinsky, M. J. Enhanced stability in rigid peptide-based porous materials. Angew. Chem. Int. Ed. 51, 11044-11048 (2012).
18. Connolly, M. L. Solvent-Accessible surfaces of proteins and nucleic acids. Science 221, 709-713 (1983).
19. Deng, H. et al. Multiple functional groups of varying ratios in metal-organic frameworks. Science 327, 846-850 (2010).
20. Fukushima, T. et al. Solid solutions of soft porous coordination polymers: Finetuning of gas adsorption properties. Angew. Chem. Int. Ed. 49, 4820-4824 (2010).
21. Burrows, A. D. Mixed-component metal-organic frameworks (MC-MOFs): Enhancing functionality through solid solution formation and surface modifications. CrystEngComm 13, 3623-3642 (2011).
22. Henke, S., Schneemann, A., Wutscher, A. & Fischer, R. A. Directing the breathing behavior of pillared-layered metal-organic frameworks via a systematic library of functionalized linkers bearing flexible substituents. J. Am. Chem. Soc. 134, 9464-9474 (2012).
23. Lescouet, T. et al. Homogeneity of flexible metal-organic frameworks containing mixed linkers. J. Mater. Chem. 22, 10287-10293 (2012).
24. Serra-Crespo, P. et al. Interplay of metal node and amine functionality in NH2-MIL-53: Modulating breathing behavior through intra-framework interactions. Langmuir 28, 12916-12922 (2012).
25. Maes, M. et al. Separation of styrene and ethylbenzene on metal-organic frameworks: Analogous structures with different adsorption mechanisms. J. Am. Chem. Soc. 132, 15277-15285 (2010).
26. Biradha, K., Hongo, Y. & Fujita, M. Crystal-To-crystal sliding of 2D coordination layers triggered by guest exchange. Angew. Chem. Int. Ed. 41, 3395-3398 (2002).
27. Kitaura, R., Seki, K., Akiyama, G. & Kitagawa, S. Porous coordination-polymer crystals with gated channels specific for supercritical gases. Angew. Chem. Int. Ed. 42, 428-431 (2003).
28. Li, D. & Kaneko, K. Hydrogen bond-regulated microporous nature of copper complex-Assembled microcrystals. Chem. Phys. Lett. 335, 50-56 (2001).
29. Maspoch, D. et al. A nanoporous molecular magnet with reversible solventinduced mechanical and magnetic properties. Nature Mater. 2, 190-195 (2003).
30. Lu, J. Y. & Babb, A. M. An extremely stable open-framework metal-organic polymer with expandable structure and selective adsorption capability. Chem. Commun. 1340-1341 (2002).
31. Choi, H. J., Dinca, M. & Long, J. R. Broadly hysteretic H2 adsorption in the microporous metal-organic framework Co(1,4-benzenedipyrazolate). J. Am. Chem. Soc. 130, 7848-7850 (2008).
32. Salles, F. et al. Multistep N2 breathing in the metal-organic framework Co(1,4-benzenedipyrazolate). J. Am. Chem. Soc. 132, 13782-13788 (2010).
33. Horcajada, P. et al. How linker's modification controls swelling properties of highly flexible iron(III) dicarboxylates MIL-88. J. Am. Chem. Soc. 133, 17839-17847 (2011).
34. Aguado, S. et al. Guest-induced gate-opening of a zeolite imidazolate framework. New J. Chem. 35, 546-550 (2011).
35. Hu, J-S. et al. Syntheses, structures, and photoluminescence of five new metal-organic frameworks based on flexible tetrapyridines and aromatic polycarboxylate acids. Cryst. Growth Des. 10, 2676-2684 (2010).
36. Colombo, V. et al. Tuning the adsorption properties of isoreticular pyrazolatebased metal-organic frameworks through ligand modification. J. Am. Chem. Soc. 134, 12830-12843 (2012).
37. Henke, S., Schmid, R., Grunwaldt, J-D. & Fischer, R. A. Flexibility and sorption selectivity in rigid metal-organic frameworks: The impact of ether-functionalised linkers. Chem. Eur. J. 16, 14296-14306 (2010).
38. Kepert, C. J., Prior, T. J. & Rosseinsky, M. J. Aversatile family of interconvertible microporous chiral molecular frameworks: The first example of ligand control of network chirality. J. Am. Chem. Soc. 122, 5158-5168 (2000).
39. Czepirski, L. & Jagiello, J. Virial-Type thermal equation of gas solid adsorption. Chem. Eng. Sci. 44, 797-801 (1989).
40. Klafter, J. & Shlesinger, M. F. On the relationship among three theories of relaxation in disordered systems. Proc. Natl Acad. Sci. USA 83, 848-851 (1986).
41. Mittermaier, A. New tools provide new insights in NMR studies of protein dynamics. Science 312, 224-228 (2006).
42. Teague, S. J. Implications of protein flexibility for drug discovery. Nature Rev. Drug Discov. 2, 527-541 (2003).
43. French-Constant, R. H., Rocheleau, T. A., Steichen, J. C. & Chalmers, A. E. A point mutation in a Drosophila GABA receptor confers insecticide resistance. Nature 363, 449-451 (1993).
44. Altschmied, L., Baumeister, R., Pfleiderer, K. & Hillen,W. A threonine to alanine exchange at position 40 of Tet repressor alters the recognition of the sixth base pair of tet operator from GC to AT. EMBO J. 7, 4011-4017 (1988).